Cottoperca gobio: 115021716
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Entry
115021716 CDS
T07513
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgob00535
]
115021716 (col14a1)
Proteoglycans [BR:
cgob00535
]
Extracellular matrix (ECM) proteoglycans
Others
115021716 (col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
VWA_3
NDNF
Motif
Other DBs
NCBI-GeneID:
115021716
NCBI-ProteinID:
XP_029308193
Ensembl:
ENSCGOG00000010147
UniProt:
A0A6J2RBI5
LinkDB
All DBs
Position
16:14484436..14610594
Genome browser
AA seq
1770 aa
AA seq
DB search
MLSTGQIRWCLWAPLVLLALVSHFPSKAQGQVPVPRRLRFKVLSSSKLLVSWKEPKGDFD
SYLFLYNSTPGGQQREIILSKSDTKVLITDYSPSKGYTVSVISVSGSEQSRPLHGRHKAE
RGESDSEVNTKPERLPDSVVPPEDANEISGVDQFVCHTEAIADIIILVDGSWSIGRLNFR
LVRMFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNAFFTKDAVIDAVKNLPYKGGNT
LTGLALTYVLENCFKPESGSREGIPKIGILITDGKSQDDVIPPAESLRNAGVELFAIGVK
NADENELHSIASEPDDSHVYNVADFNVMSSIVEGLTKTVCEQVEQQDKDIKQKHIPEITG
APLELLTSEVTARSFRVSWSHAPGNVEKYRVVYYSASGGEPQEAVVEGSETSAVLQHLNS
VTEYQLAVFAVYANEASEALRGSETTVALPTVTVLQLSDVTRSTMKARWDSVDGVSGYML
LYAPLIDDGDLHEKEVKVSEAVTELELVGLTPLTEYTVTVYAMYGEEASDPITIQKTTLP
LRPPSNLQFSDITHNSAHIRWEPVPRGVKGYRIMWVKTDGLITEEVEVGPVNSYDLSELT
SLMEYSVAIFALYDEGQSEPLTDGFTTTPVPGPLDLRSNDVGTDSFQVSWDHSASDIVLY
RLSWAPFTGGDTKEVVLSGSDNRYILTGLSASTEYEAMLTAVFKDESESDTVSVIETTLA
RHAARNLLLSDETTQSLEASWELEDPHVQSYRVSYAGLRGDHKEESVLVPGGQRRAVLQP
LLSDTQYKVTVTPVYAGGQDGISVSATGATLPLLSPGNLRVSEEWYNRFRVTWDPPQSPT
AGYRIVYQPIYVPGPVLETIVGKDVNSKVLLNLLSGTEYSVQVTASYPTGQSEPLLANAK
TLFLGVSGLSTYQIRPNSLCVQWQPILHATLYRVSIQSTLNGQRQEVSLGGGASRQCFYD
LTPSSQYQISVHTQMQEMEGPSVSITDMTLPAPTLPPTEPPTTEPPPTIPPAKEVCKEAK
ADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAIAQFSDDARTEFQLSSH
GNKEELLEAIQSIRYKGGNTKTGRAIKHVKESIFTPEGGARRGVPKVLVVLTDGRSQDDV
NKVSKEMQMDGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKKIEEQLITFVC
EAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYSTIPGVSLEPGSFNSFPCYRLHRDALV
SQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKDNEPLVGIILDNSGKTLTF
FNYDYKGDFQTVAFEGTEIKRIFHGSFHKLHVTVSKTFVKVVLDCSVVGEKSVSAAGNIT
TDGVEILGRMVQSRGSRDNSAPFQLQMFDIICSTSWAGRDKCCELPALRVEEQCPSMPHA
CTCSQDSKGPPGPSGPPGGPGIRGARGDRGEPGVTGPHGPVGEMGPSGPSGPPGPQGPSG
LSIQGPPGGGGEKGERGEIGPAGQMGVPGGSGSPGRDGPPGARGLPGNNGPQGRQGPPGP
GGSPGAPGAPGPGGSAGPQGDHGLTGSAGTKGDKGERGDVQTQAAVRAIARQVCEQLIQS
HMSRYNSVLNQIPVQSATSVRTITGPPGEPGRRGLPGPQGEQGPSGRSGFPGGSGQNGRA
GERGLLGEKGERGSPGVGSQGPRGQSGPPGLPGEGRTGSQGPPGRPGNPGTPGRLGNPGS
TGPAGTPGYCDQNSCMGYNVGVQQDYGNDY
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaacggggcagattaggtggtgcttgtgggctccgctggtgttactggcccta
gtttcccatttcccctccaaggcacagggtcaagttccagttccgaggaggctgcgtttc
aaagtgctgagctcaagcaaactccttgtttcatggaaggagccaaaaggagactttgac
agctatctattcctctacaacagtacaccaggtggtcagcagagggagatcatcttatct
aaatctgacactaaggtgttgataacggactacagcccctctaagggctacactgtcagt
gtcatcagtgtcagcggcagtgagcagagcagaccacttcacggcagacataaagcggag
agaggtgagagtgacagtgaagtcaacactaagcctgagaggctgcctgactcagttgta
cctcctgaggatgccaacgagatctctggagttgatcagtttgtgtgccacactgaggcc
attgcagacatcataatcctggtggacggctcctggagtattggtcgactcaacttccgg
ctggtccgcatgtttttggaaaatctggtcaatgcctttgatgttggcatcgataaaaca
aggataggtctggctcagtacagtggtgatcccaggatagagtggcatctaaatgctttc
ttcacgaaagatgccgtcattgatgccgttaagaacctgccatacaaaggaggaaacact
ctcacaggccttgcgttgacctatgtcttggagaactgcttcaagcctgagtctggctca
cgggagggtatacccaagattgggatcctcatcacagacgggaagtcccaggacgatgtc
atacctcctgcagagagcctgcgaaatgctggggttgagctgtttgctattggtgttaag
aatgctgatgagaatgagcttcactccatcgcctcagagccggacgactctcacgtctac
aacgtggccgacttcaacgtcatgagctctatcgtagagggtctgaccaagactgtgtgt
gaacaagtggagcagcaagacaaggacatcaaacagaaacacataccagagataacagga
gcgccgctcgagctgctgacatcagaagtcacagcacgaagctttagggtttcatggagc
cacgcccccggaaacgtagagaagtacagagtggtttattactctgctagcggaggagaa
ccacaggaggcggtagtggaaggtagtgagacttcagcggtgttacagcatctcaactct
gtcactgagtaccagctggctgtgtttgctgtgtacgcaaacgaggcaagtgaagctctc
agaggatcggaaacaactgtggcccttcccacagtgacagtcctccagctgtctgacgtg
actcgcagcaccatgaaagcaagatgggacagtgtggatggagtttctggctacatgctg
ctgtatgcaccgcttatagacgatggagacttgcacgagaaggaggtaaaggtatcggag
gcagtaacagagctagagctggttgggttgacccctctcactgaatacactgtcactgtt
tatgccatgtatggggaggaggccagtgaccctattacaatccaaaaaactactttacca
ctgagacctcccagcaacctccagttctctgacatcactcacaactccgcccacatcagg
tgggagcccgtgcccagaggagttaaaggttaccgcatcatgtgggtcaagacagatgga
ctaatcacggaggaggtggaggtgggtccagtgaactcttatgacctcagtgagttgacg
tctctgatggagtactcagtggccatctttgccctgtacgatgagggccaatcagagccg
ctcacagacgggttcactaccactccagttcctggtcctttggatctacgttccaacgat
gttggcacagacagcttccaggtcagctgggatcactcagctagtgacatcgtcctctac
agactctcctgggcaccgttcacaggtggcgatacaaaggaggtggtcttaagtggaagt
gataacagatacatccttaccggtctgagtgcatcgactgagtacgaagctatgttgacg
gctgtattcaaagatgaatccgagagtgacaccgtctctgttatagagaccacattggca
cgtcatgctgcgaggaaccttctgctgagtgacgagacaacccagagcttagaggcatca
tgggagctggaagacccccatgtgcaaagctacagggtctcttacgctggcctcaggggc
gaccacaaagaggagtctgtgttagttcctggtggtcaaaggagagcagtgcttcagcct
ttactgtcagacacacagtacaaagtgacagtgacgccagtgtacgccggcggtcaagac
ggcatcagtgtctcggctacgggtgccacattgcccctcttgtctcctggaaacctccgt
gtgtcagaggagtggtacaaccgcttcagggtcacatgggatccacctcagtctcctaca
gcgggttacaggatcgtctaccagcccatttatgttccaggaccagttttggagacaata
gtggggaaagatgtgaactccaaggtgcttctgaatctactaagtgggacggagtacagt
gttcaagtgacggcttcctaccctacaggacaaagtgaaccactgcttgcgaacgccaag
acattgttcctcggtgtctctggcttgtcaacctaccagatacgtcccaacagcctgtgt
gtccaatggcagcctattctacatgcaacgctatacagagtctccattcagtcaacactc
aatggtcaaaggcaggaagtgagtcttggaggtggtgcttcccgacagtgcttctatgac
ctcactcccagcagccagtaccagatcagcgttcacactcagatgcaagaaatggaggga
ccttctgtctccatcactgacatgacactgccagcgcctactctacctccgactgaaccc
cccaccacagagccccctcccaccatcccacccgctaaagaagtgtgtaaggaggccaag
gctgacctggcattcctcgtcgacggttcctggtccatcggagacgacaacttcatgaag
atcacgcgtttcctctacagcaccatgggatcactggatctgattggaccagacggcacc
caggtggccatcgctcagttcagtgacgatgctaggacagaattccagctgagttcccat
ggcaacaaggaagagctgttggaagctattcagagtatcagatacaaaggaggaaacacc
aagacaggtcgggccatcaaacatgtgaaggagtctattttcaccccagagggcggagct
agaaggggcgttcctaaagtcctggttgttctcactgatggacgttcgcaagatgatgtc
aacaaagtgtccaaggagatgcagatggatggctatatcatctttgccattggctttgcg
gacgcggactacggggagctggtgaatattgccagcaagcccagcgataggcacgtcttc
ttcgtggacgatttggatgctgtgaagaaaatagaagaacagctcattacttttgtctgt
gaggctgcaaccgccacttgtccatctgttttgatgagtggtaacacaatggcaggtttc
cgtatgatggagaagtttggcctcgtagagaaggagtacagcaccatacctggagtttct
ctggagccgggttcgttcaacagcttcccctgttacagattacatcgtgacgccctggtg
tcgcagcccaccaagtaccttcatcctgaaggtttaccctctgactacaccatttctatg
atgctccgcctacttcctgagaccccacaggagccctttgcattgtgggaaatcctcaac
aaggacaacgagccattggtgggaataattctggacaactctggaaagaccttgacgttc
ttcaactacgactacaaaggagacttccagaccgtcgcctttgaaggaactgaaatcaaa
agaatcttccatggcagcttccacaagctccatgtaaccgtcagcaaaacgtttgtgaag
gtggtgttagattgttctgtggtcggagagaaatccgtcagtgctgctggtaacattacc
actgatggagtggagatcctcggaaggatggttcagtccagaggcagccgggacaactct
gctccattccagctccagatgtttgacatcatctgcagtacatcatgggccggcagagat
aagtgttgcgagctgccagcattgagagttgaggagcagtgcccctccatgcctcatgcc
tgcacctgctcccaggacagcaaaggacctccaggaccttccggaccccctggtggtcca
ggcataaggggagccagaggagacagaggagagccaggagtgacgggacctcatgggcca
gtgggagagatgggcccttctggaccatcaggaccgcccggtcctcagggacccagtggt
ctctctattcagggccccccgggtggtggtggggagaagggagagagaggagagatcggc
ccagccggacaaatgggtgttcctggaggctcaggctcccctggtagagacggcccccca
ggagcaaggggtctgccgggtaataatggaccgcagggacgacaaggacctcctggaccc
ggtggatccccgggagcaccaggagcgccaggacctggtgggtcagcagggccccaagga
gatcacggacttactggttctgctggtaccaaaggcgataagggagaaagaggtgatgtg
caaacccaagctgctgtgcgtgccatcgcacggcaagtgtgtgaacagctcatccagagc
cacatgtctcgctataactccgtactgaaccagatccccgtccagtcggcgacgtcagtc
cgaaccataaccggtccgcccggagaaccgggtagaagaggcctcccaggtcctcaggga
gaacaagggccatctggcaggtcaggcttccccggtggcagcggccagaacggacgagcg
ggagagagaggtctgctgggagagaagggagagagggggagtccaggggttgggagtcag
ggacctcgaggacaatccggacctccaggcctgccaggtgaaggacggacaggcagccag
gggccccctggtcgtcctggtaacccgggaacaccggggaggttggggaatccaggttca
acaggaccagctggcacaccaggatactgtgaccagaactcctgtatggggtacaacgtc
ggagttcaacaggactacgggaatgattactga
DBGET
integrated database retrieval system
