Cottoperca gobio: 115021827 Help Entry 115021827         CDS       T07513                                  Symbol htt Name (RefSeq) huntingtin isoform X1   KO K04533   huntingtin Organism cgob  Cottoperca gobio Brite KEGG Orthology (KO) [BR:cgob00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cgob03019]     115021827 (htt)    04131 Membrane trafficking [BR:cgob04131]     115021827 (htt)    03029 Mitochondrial biogenesis [BR:cgob03029]     115021827 (htt) Messenger RNA biogenesis [BR:cgob03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      115021827 (htt) Membrane trafficking [BR:cgob04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     115021827 (htt) Mitochondrial biogenesis [BR:cgob03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     115021827 (htt) SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_GCN1 HEAT_EF3_N HEAT_2 HEAT_ECM29 Motif Other DBs NCBI-GeneID:  115021827 NCBI-ProteinID:  XP_029308435 Ensembl:  ENSCGOG00000017667 UniProt:  A0A6J2RGG7 LinkDB All DBs Position 1 Genome browser AA seq 3195 aa AA seqDB search MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL SPGSRTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELY KEIKKNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEETVQETLAAA MPKIMSALGHFANDGEIKVLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRTSYFYTWL LNVLLGLLVPVDEEHPTHLILGVLLTLRYLMPLLQQQVNTSSLKGSFGVMRKEADVQPTP EQLLQVYELTLHYTQHWDHNVVTASLELLQQMFRTPPPELLHMLITAGSILHGTVFRQDT ESRARSGSILELIAGGGSSCSPLLLRKPRGKMLSGEEDGLEDDAERTEVTTGAFTASVVG ADGSSAAQVDIITEQPRSSQHTLQPGESVDLSASSEQGGGGGGTSASDTPESPNDNEEEM LSRSSSGGANITPETADYTTPETEGGPSGEGGTLLGTNDRSLPPSDSSQTTTEGPDSAVT PSDVAELVLDGSESQYSGMQIGTLQDEEDEGAAPSAQEEHPEQFLQSALALSKPHLFEGR GHNRQGSDSSVDRFVPKDEPAEPEPDNKPSRIKGPIGHYTDQGVEPLVHCVRLLAASFLL TGQKNGLTPDKEVRVSVKALAVSCIGAAAALHPEAFFNSLYMEPLDGTPVEEQQYISDML GLIEHGDPQIRGATAILCAAIIQAALTKTRYNIHSWLASVQSATGNPLSLVDLVPLLQRT LKDESSVTCKMACSAVRHCIMTVCSSTLSELGLQLMINLLALRDSSYWLVRTELLETLAE MDFRLVNFLERKTETLHKGDHHYTGRLRLQERVLNDVVIRLLGDDDPRVRHVAASAVSRL VSRLFYDCDQGQVDPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLSNNVS DVTIENNLSRVVAAVSHTFTASASKALTFGCCEALCLLAVHFPVCTWSTGWHCGYVSSSS SFSSRSSLNRSRGRALSVSQPSSAPASSATSSSAPDTERRTLTVGMANMVLSLLSSAWFP LDLSSHQDALLLSGNLLAAVAPKCMRNPWAGEEEGSSGGTNTSGGPNKMEEPWAGLSERS LVAMVEQLFSHLLKILNICAHVLDDTPPGTAVKATLPSLSNTPSLSPIRRKGKEKDAAEP SAAPMSPKKSIEINTGRPADGTGSTAVNKSTTLGNFYHLPTYLKLYDVLKATHANFKVTL DLHSSQEKFGGFLRSALDVLSQLLELTTLHDISKCVEEILGYLKSCFSREPTMATVCVQQ LLKTLFGTNLASQCEGILSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADAS LRNMVQAEQEQDTSGWFDVMQKASNQLRSNIANATRQRGDKNAIHNHIRLFEPLVIKALK QYTTSTSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAII PNIFFFLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRG SNKADAGKELETQKEVVVSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQISDVI LPMIAKQQMHLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTTPVTMASVATVQLWVS GILAVLRVLVSQSTEDIVLSRVHELSLTPHLLSCHTIRRLHQQSPSPSDPPTDALGSQEP NGEAQKALPEETFARFLLQLVGVLLDDISSRQVKVDITEQQHTFYCQQLGTLLMCLIHVF KSGMFRRITAAASRLLKGEGGGGQPGAEAGLFYPLEALNSMVQCLITTHPSLVLLWCQVL LIIDYTNYSWWAEVHQTPRRQSLSCTKLLSPHSGEGEEKPEHRLAMVNREIVRRGALILF CDYVCQNLHDSEHLTWLIVNHVRDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCD NLSAPTMLKKTLQCLEGIHLSQSGSLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAE TLQNSIAQLPVEELHRIQEYLQTSGLAQRHQRFYSLLDRFRATVADTSSPTPPVTSHPLD GDPPPAPELVNADKEWYVALVKSQCCLRGDVSLLETTELLTKLPPADLLNIMSCKEFNLS LLCPCLSMGMQRLARGQGSLLLETALQVTLERLAGVTGSLPVPHQSFLPPDQPQPYWKQI ADVYDEPGFYPRVLSLCRALSQYLLIVSQLPSSLHIPSDKEHLITTFTCTAAEVVAWRLL QNQLPLSVDLQWALSCLCLALQQPCVWNKLSTPEYTTHTCSLVYCLRLIIVAVAVSPGDQ LLHPEKKKTRAESDAEGDEVDSAHADHMGEWQACEIMAELVEGLQSILAVGHHRNGAFPA FLTPTLRNIVISLSRLPLVNSYTRVPPLVWKLGWSPQPGGEYGTTLPEIPVDFLQEKDVF REFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQA ITSLVLSAMTLPTAGNPAVSCLEQQPRNKSLKVLETRFGRKLAVIRGEVEREIQALVSKR DNVHTHHPYHAWDPVPSLSAASAAGTLISHEKLLLQINTEREMGNMDYKLGQVSIHSVWL GNNITPLREEEWGEDEEDEADTPAPTSPPISPINSRKHRAGVDIHSCSQFLLELYSQWLI PGSPSNRRTPTILVSEVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLA PAICKAAAVLGMDKAIAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLI PTISEYLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAGIIQVCGVMV SASEDSTPSVIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLML TCMYTAVLASGSDVTGVRGQVDCAVAEAVGVTAGHVGFSSGKEKASPASRPSHSDPQAPD SESIIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNQQP YPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQ WISALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSPYY QLLGCLQSIHQDTSL NT seq 9588 nt NT seq  +upstreamnt  +downstreamnt atggccaccatggagaaattgatgaaggcatttgagtctctgaagtcattccagcaacaa cagggaccaccaactgctgaggagcttgtccagagacagaaaaaagaacaggctaccaca aagaaggacagggtcacccactgcctgacaatatgtgaaaacatcgtggctcagtctctg agtcctgggagcagaacgtctccagagtttcagaaactgctgggcatcgccatggagatg ttcctgctctgcagtgatgacagcgaatcagacgtccggatggtagccgatgagtgcctc aacaaaatcatcaaagcgctgatggactccaacctgcctagactgcagctggagctgtac aaagaaattaaaaagaacggtgcctctcggagtctgagggcagctttgtggaggtttgct gagcttgctcacctcatcagaccacagaaatgcagaccctaccttgtcaacctgttgcca tgcctctcccgaatcaccaagcggcaggaggagaccgtacaggagactctggctgccgca atgcccaagatcatgtccgccttgggacacttcgccaatgatggcgagataaaggtgctg ctaaagtcatttgtggccaacttgaagtccagctcccccaccatcaggcggacagcagcc agctcagcagtcagtgtgtgccaacactccagacgcaccagctacttctacacctggctt cttaatgtgctgctgggtctgctggttccagtggacgaggagcaccccacccacctaatt ctgggagtgctgttaacccttcgctacctgatgcctctgctgcagcagcaagtcaacacc tccagcctcaaaggaagctttggagtcatgaggaaggaggctgatgtccagccgacacct gagcagctgctacaggtgtacgagctgaccttacactacacacagcactgggatcacaat gtggtcacagcgtctcttgagctcctgcagcagatgttcaggactcctccgccagagctt ctgcacatgctcatcactgcgggcagcatcctgcacggcactgtgttccgccaggacacg gagagccgtgcacgctccggcagcatcctcgagctcattgcggggggagggtcttcctgc agcccactccttcttaggaaaccgagaggtaaaatgctctctggggaggaggatggcttg gaggatgacgctgaaaggacagaggtcaccactggtgccttcacagcgtccgtcgttggt gcagacggctcctccgcggcccaggtggacatcatcaccgagcagccgcgctcctcccag cataccctgcagcctggcgaatctgtggacctcagtgcctcgtcagagcagggcggcggc gggggtgggacatctgcatcagacactcccgagtcacccaatgacaacgaggaggaaatg ctgagtcggagctccagcggcggggccaacatcactccggagacggctgactacaccaca cctgagacggagggagggccctcaggagaaggagggactctgctgggcactaacgatcgc tcgcttccacccagtgactcctcacagaccaccacggagggaccagactcagctgtcacc ccttcagacgtagcagaactggtgctggatggcagtgagagtcagtactctgggatgcag atcgggacattacaggatgaagaagatgaaggagcagcaccttccgcccaagaagaacac ccagaacaattcctgcaatcagcactggctctgagcaaacctcatctcttcgaaggccga ggtcacaaccggcagggttcagacagcagcgtggaccgcttcgtaccaaaggacgaacct gcagaacctgaacctgacaacaagccatcgcggataaaaggcccaatcggacattataca gaccagggggtggagccactggtgcactgtgtacggcttcttgcggcttccttcctgctg acaggacaaaaaaatggtctgacccctgacaaggaggtgcgagtgagcgtgaaggctctg gccgtcagctgtattggggcagcagcagcgctccatcctgaagccttctttaattccctc tacatggagccgctggacggcactccagtagaagagcagcagtatatcagtgacatgctg ggcctcattgaacatggggacccccagatcagaggggccacagccatcctctgtgcagcc atcatacaagccgcgctcaccaaaacacgttacaacatacacagctggctggccagtgtg cagagtgcaacaggtaaccctctgtccctggtggacttggtgcctctgctccagagaact cttaaagatgagtcctcagtcacctgcaagatggcttgctctgcagtgaggcactgcatc atgaccgtgtgcagcagcaccctgagtgagctcggcctgcagttaatgataaaccttctt gctctgagggactcgtcctattggcttgttcgcactgagctcttggagaccctggctgag atggacttccggttagttaatttcctggagagaaaaacggagactttgcacaaaggggat catcactacactgggcggctgcggctgcaggaaagagtcctgaatgatgtggtcatcaga ctgttgggagatgatgaccccagagtccggcacgtggccgcctctgctgtcagcaggctg gtttccaggttgttctatgactgcgaccagggtcaagtggacccagtagtggcgattgcc cgggaccagagttctgtctacctgcagctgctgatgcatgagacacaacccccctcccag ttcacagttagtacaatcacaaggacgtacagaggctacaacttgtccaacaatgtgtct gatgtcacaatcgagaacaatttgtccagagtggtggctgccgtctcccacactttcacc gcctctgcctccaaagccctcacttttggctgctgtgaggccttgtgcctcctggctgta catttcccagtatgcacttggagtacaggctggcactgcggctatgttagctccagtagc agcttttcttctcgctctagtctgaaccgcagcagaggcagggccctcagtgtgtcgcag cccagcagtgctccagcctcttcagccacctcctcatctgcaccagacactgagcggagg actctgacagtaggaatggccaacatggtcctctctttactctcctccgcctggtttcca ctggatctctcttcgcaccaggatgcacttttgctttctggcaatctgctcgctgctgtg gcgcctaaatgcatgcgtaacccctgggctggagaggaagaaggcagcagtggcggcacc aacactagtggcggcccaaataagatggaggaaccctgggcagggctgtcggagcgctcc ctggtggccatggtggagcagctcttctctcacctactgaagatcctcaacatctgtgcc catgtgctggatgacacaccacctggaacagcagtgaaggccaccctcccttccctgagt aacaccccctccctcagtcccatccggagaaaaggcaaggagaaggatgctgctgagccc agtgctgcccctatgagcccaaagaaaagcattgagatcaacacaggcaggccagcagac ggtacggggtcaaccgccgtcaacaaatctaccaccctcggaaacttctaccacctgcca acctacctcaagctctacgatgtcctcaaagctacacacgccaacttcaaggtgacgctg gacctccacagtagccaggagaagtttggcggtttcctgcgttctgctctggatgttttg tctcagctcctggagctcaccacactacatgacatcagcaagtgtgtcgaggaaatcttg ggctacctcaagtcctgcttctccagagaacctaccatggctactgtttgtgtacaacag ctgttgaagaccctgtttggcaccaacctagcctcccagtgcgagggcatcctgagtgga cccagtcgctcccagggcaaggctctccgtcttggctcatccagcctgcgaccaggcctc taccactactgcttcatggcgccgtacactcacttcactcaggctctcgcagacgccagt ctccgtaacatggtgcaggctgaacaggagcaggacacctctggatggtttgatgtgatg caaaaagcttcgaaccagctgaggtccaacattgcaaatgcaacacgccaaagaggagac aagaatgccatccacaaccacattcgtctgtttgagccgctggtgatcaaagctttgaag cagtacaccaccagcacctctgtggccctgcagagacaggtactggacctgcttgcacaa cttgtgcagctcagagtcaactactgcctgcttgactcagatcaggtgttcataggcttt gtcctgaagcagtttgagtacattgaagtgggacagttcagagattcggaggccatcatt cccaacatcttcttcttcctggtgctgctgtcttacgagcgttaccactccaagcagata atcagcatccccaagatcatccagctgtgtgacggcatcatggcgagcggcaggaaagct gttacacacgccatcccagccttgcagccaatagtccacgacctgtttgtgttgaggggc tcaaacaaagctgatgcaggcaaagagctggagacacagaaagaagtggtggtctccatg ctgctcagacttgtgcaacaccatcaggtgttggagatgttcatcctcgtactgcagcag tgtcacaaagagaatgaggacaagtggaagagattatccagacagatttctgacgtcata cttccaatgatcgctaagcagcagatgcacctggattctccggaggcgttgggagtgttg aacactctgtttgagactgtggcgccctcctccctcagacctgtagacatgctgctcaag agtatgttcaccaccccggtcaccatggcttcagtagctacagtccagctgtgggtgtcc ggtatcctggcagtgctccgagtactcgtctcccagtccactgaggacattgtcttgtca cgggtacacgaactctccctaaccccgcatctcctctcctgccacacaatccgtcgcctg catcagcagagcccctccccaagtgacccccctactgatgcactaggcagccaggaacct aatggtgaggcacaaaaagccctgcctgaggaaacctttgccaggttcctgctccagctg gtaggagtgttgctggatgacatttcctccagacaggttaaagtggacattacggagcag caacacaccttttactgccagcagctgggcacactgctcatgtgtctcatacacgtcttc aaaagtggaatgttccgcaggatcacagctgcagctagccgtctcctgaagggagagggt ggaggtgggcagcctggcgcagaggccggcctgttttaccccctcgaggctctgaacagc atggtgcagtgcctgatcaccacccacccctccctggtgctgctgtggtgccaggtcctc ctcatcatcgactacaccaactactcctggtgggcggaggtgcaccagacacccaggaga caaagcctctcttgcacaaagctgctgagccctcactcaggggaaggagaagagaagcca gaacatcgcttggctatggtcaaccgagagattgtacgcaggggagccctcatcctcttc tgtgactatgtgtgtcagaaccttcatgactcggagcatctgacctggctgattgtcaac cacgtgcgtgacctcatcagtctttcccatgagcctccagtgcaggatttcatcagcgcc gtgcaccgcaactcagctgccagtggtctcttcatccaggccatccagtcccgctgtgac aacctcagtgctcccaccatgttgaagaagactctgcagtgtttggaaggcatccacctg agtcagtctggctccttgctgatgctttatgtggacaagctgctcagtacacccttcagg gttctggctcgcatggtggacacactggcgtgtcgcagggtggagatgctgctggctgag acgctacagaacagtatagctcagctgcctgtggaggaactgcacaggatccaggaatac ctccagaccagtggcctggctcagaggcaccagaggttctactccctgctggacaggttc agagccactgttgccgacaccagcagccccactcctcctgtgacatcacaccccttggat ggggatccaccacctgcccctgagctggtcaatgcagataaggagtggtacgtggctctg gtgaagtctcagtgttgtcttcgtggagacgtttccctgttggagacgacagaactcctc accaaactacctcccgctgacctcttaaacatcatgagctgcaaggagttcaacctaagc ctgctgtgtccatgcctgagtatggggatgcagcggttagcccggggtcaggggtcactc ttgttggagacagccttgcaggtgaccctagagcggctcgcgggggtcaccgggtcactt cctgtcccacaccagtccttcctgccacccgaccagccacaaccctactggaaacaaata gctgatgtgtatgatgagccaggtttctaccccagggttctatcgctgtgcagagctctg tcccagtacctgctgattgtgagccagctgccttcttcactacatatcccctctgacaag gaacacctcatcaccacgttcacctgcactgccgctgaggtggtagcgtggcgtctcctc cagaaccagttgcccctgagtgtggacctgcagtgggctctgtcctgcctgtgtctggcc ctgcagcagccctgcgtctggaacaaactctccacaccagagtacaccacacacacctgc tccctcgtctactgcctacgcctcatcattgttgcagttgctgtgagtcctggtgaccag cttctgcatccagagaagaaaaagacgagagcagagagcgatgctgaaggagacgaagtg gactcggcacatgctgaccacatgggcgagtggcaagcatgtgagatcatggcggaactg gtggaaggcctgcagagcattcttgccgtgggtcaccatagaaacggtgcattccccgct ttcctcacaccaaccttgcgcaacattgtcatcagtctgtcccgactgcctctggtcaac agctacacccgagtacctccactggtttggaaactgggctggtcccctcaaccaggagga gagtacggcacaacgctgcctgagatccctgtggacttcctgcaggaaaaggatgtcttc agagagttcctctaccgtatcaacacactgggctggagcagcaggactcagtttgaggag acctgggccacactgctgggggtgctggtcacccaacccatcactatggaccaggaggag gagacgcaacaagaggaggacttggagcgtacccaattgaatgtgttagcagtgcaggcc atcaccagcctggtgctgagtgccatgaccctgcccactgctggcaaccctgcggtcagc tgtctggaacagcagccccgcaacaagagcctcaaagtcctggaaacacggtttggaagg aaacttgcagtgatcagaggcgaggtggagagagagattcaggctcttgtgtcaaagagg gacaacgtccatacacaccacccgtaccatgcctgggaccctgtgccctcgctgtcggca gcctcagctgcaggcacgctgatcagccatgagaagctgctacttcagatcaacacagag agggagatgggaaatatggactacaaactgggacaggtctccatccactcagtgtggcta ggtaacaacatcaccccactgagagaggaagagtggggtgaggatgaagaagatgaagca gacactcctgcccccacctccccacccatatctcccatcaactctaggaagcatcgtgca ggtgtggacattcattcatgttcccagtttctcctggagctctacagccagtggctgatc cctggctccccgagtaacaggaggaccccgacaatcctcgtcagtgaagtggtccgatcg ctgctggcggtgtcggacctgttcacagagaggaaccaattcgacatgatgttctccacc ctgatggaactgcagaagctccacccgccagaggacgagatcctcaatcaatacctggcg cctgcaatctgcaaggctgctgccgtactgggcatggacaaagcaatagctgagcctgtg tgtcgcctgttggagacgaccctgcgcagcacccacctgcccagccgcatgggggctctg catggagtgctgtatgtgttagagtgtgacctgctggatgacacagccaaacagctcatc cccactatctctgagtacctgctgtccaacctccgggctatcgctcactgtgtgaacctg cataaccagcagcatgtgttggtaatgtgcgcagtggccttctacatgatggagaactac cctctggatgtaggggctgagtttatggctggaattatacaggtgtgtggcgtgatggtg tcggccagcgaggactccacgccctccgtcatctatcactgtgtgctgcgcggtctggag cgccttttgctgtcagagcagctgtcccgcgtggacggcgaagcgctggtcaaactcagc gtggaccgagtcaacatgccgtcgccacacagagccatggccgccctgggcctcatgctc acctgcatgtacaccgcggtgcttgcgtcgggttcagacgtgacaggggttagaggtcag gttgactgtgccgtagcagaggcggtgggcgtcacggcaggtcatgttggtttctcctca ggcaaggagaaagccagccctgccagtcgcccctcccactctgaccctcaggccccagac agcgagtcgatcattgttgccatggagagggtctctgtgctcttcgacaggatccggaaa ggtttacccagcgaggctcgtgtggtgtccaggattctgccccagtttctggacgacttc ttcccgccgcaggacgtcatgaacaaggtcatcggagagttcctgtccaatcagcaacct tacccacaattcatggccactgtcgtctacaaggttttccagacactacatgccacaggc cagtcttctatggtgcgagactgggtgctgctgtctttgtccaacttcactcagaggaca ccagtagccatggccatgtggagcctctcctgtttctttgtctctgcttccacctcccag tggatctcagccctactgccacacgtgatcagccgtatgggctccagtgaggtggtggac gttaacctgttctgcctggtggccatggatttctaccggcaccagattgacgaggagctc gaccgcagagctttccagtccgtctttgagaccgtggcctcgccaggcagcccttattac cagctgctgggctgtctgcagtcaatccaccaggacacatcactctga

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