KEGG   Cottoperca gobio: 115021957
Entry
115021957         CDS       T07513                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
cgob  Cottoperca gobio
Pathway
cgob03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115021957 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgob03019]
    115021957 (ndc1)
Messenger RNA biogenesis [BR:cgob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115021957 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup UNC-79
Other DBs
NCBI-GeneID: 115021957
NCBI-ProteinID: XP_029308557
Ensembl: ENSCGOG00000018006
UniProt: A0A6J2RGK8
LinkDB
Position
17:complement(6077051..6084746)
AA seq 671 aa
MYPNMFSAEQSCWFVRKVICWRAVASIAWAVLLLPSITAVFVILSRFSLLHPIQTVSECL
SFLTSASAIFSFILLCGVIIMVGFLNLEYYTVVPTIACSKIALLGQLLHPRQFVNSLAHC
IMGIIVAWCCAITIGGRFETIGYPCTQGDGTDSSPQMCLNEYHLILLLAGAFVGLSHSLL
GVIYNMNYVSFHTVQQYKYLRFKGSLPLLVKCSATQALYSVRNYIVVYLFLGYVPKAWIC
KTLNLHLNSSVHPLDSIAGLLDLNLLYQLWISASFLLLTWHITLLLFRIFVTEVYSFPVQ
SSFTEDAHQCLPKVLTDKQPMILKFLALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNA
MSKECLSLLADLTQRLITYHDTVATNGRAKSLSTGSERKTSSETSDDPMSPRPTLLMRTP
ASVFARSIVGSPQSPLTAPFTPDLGSPFASPALRRLTAPADPCSPWFGTVQSPHIMRRAP
KLWSTSTDSQGNGSPLASPASVPSPKQEASKPSLLAQFLQNRKDQVKHFLAKRVLIMYLF
NKLPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTALPSILSSMLVLQEAVD
RHFKLPHASSKPVRSASSMGDSTHKTLRFALRATLKTAIYRITTTFGNHLNAVQMSAEHR
KRLQQFLENKE
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtatccaaacatgttttctgcagagcaaagttgttggtttgtccgcaaggtgatttgc
tggagagctgtggcgagtattgcttgggctgtcctgttgttgccatccatcacagcagtt
tttgtaatcctcagcaggttcagtctcctccacccaatccagacggtatcagaatgcctg
tccttcttaacgagtgcaagtgccatcttctccttcatcctgctgtgtggagtgatcatc
atggtggggttcttgaacctggagtattacacagtcgtcccaactattgcatgttcgaaa
attgccctgttgggtcagctgctccaccctcgtcagtttgtcaactccctggcccactgc
atcatgggaataatcgtggcttggtgttgtgccatcaccatcgggggcagatttgagacg
atcggttacccctgcacacagggtgatggcacagacagttcccctcagatgtgtctgaat
gagtatcacctcatccttctgctggctggagcctttgttggattatctcacagtctgctt
ggtgtgatctacaacatgaactacgtctcttttcacactgttcagcaatacaaatacctt
cgctttaagggatccctacctttattggtgaagtgcagcgccactcaagcactttactct
gtcaggaactacattgttgtgtatttgtttttggggtacgttccaaaagcatggatttgt
aaaaccctgaaccttcatttgaacagctcagttcaccctcttgacagtatcgctggactg
ctcgacctaaacctgctctaccaactgtggatcagtgccagcttcctcctcctcacgtgg
cacatcacactgctgctctttaggatctttgtcactgaggtgtacagtttcccggtgcag
tcctcttttactgaggatgcgcaccagtgtcttcctaaagttcttacggacaagcagccg
atgatattgaagtttctagctctgcaggacttggctctgctgtctcaacactccccatcg
agacgctgtgaagtcttcagtctgagtcagccaggaggccatcctcacaactggaatgcc
atgagtaaggagtgtctgtctctgctggccgatctgacccagagactcataacttatcat
gacactgtagcaaccaatggcagggccaagtccctgtctaccgggagtgaaaggaagacc
tcgtctgagacgtcggatgacccgatgagcccgaggcccactttactgatgagaactcca
gcttctgtattcgcacgctccattgttggcagcccacagagccctctgacggcaccattc
actcctgacctgggcagcccttttgcttctcccgccctgcggcgtcttactgctcctgcg
gacccatgctcgccgtggttcggcacagtgcagagtccacacatcatgaggagagcccca
aaactctggtccacctccacagattcccaggggaacggcagtcccctggcatcacctgcc
tcagttcccagtcccaagcaggaagcgtccaaaccgagtctcctggctcagttcctccaa
aacagaaaagatcaggttaaacatttcttggcaaagcgagtgctgataatgtatttgttt
aacaagcttccagaagcctccagtcaagctctgtttgcagacagccaggctcacatctgg
gctttagaagggctgtcataccttgttcaagcctccttctcagaagaccagtttggagtc
gtacagactgcattacccagcattctcagttccatgctggtcttacaagaggcggtagat
cggcacttcaagctgccgcatgcctccagtaagcccgtcaggtcggccagcagcatggga
gactctactcacaaaacactgcgctttgctctcagggccactctgaagactgccatctac
aggataacaactacttttggaaatcacttaaatgctgttcagatgtctgcagagcaccgg
aaaagattgcagcagtttctggagaacaaggaataa

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