Cottoperca gobio: 115021986
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Entry
115021986 CDS
T07513
Symbol
vps4b
Name
(RefSeq) vacuolar protein sorting-associated protein 4B isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
cgob
Cottoperca gobio
Pathway
cgob03250
Viral life cycle - HIV-1
cgob03272
Virion - Hepatitis viruses
cgob04144
Endocytosis
cgob04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115021986 (vps4b)
03272 Virion - Hepatitis viruses
115021986 (vps4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115021986 (vps4b)
09143 Cell growth and death
04217 Necroptosis
115021986 (vps4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115021986 (vps4b)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115021986 (vps4b)
Membrane trafficking [BR:
cgob04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
115021986 (vps4b)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
Check point factors
Other check point factors
115021986 (vps4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_5
AAA_22
AAA_14
RuvB_N
AAA_18
IstB_IS21
DUF815
AAA_2
AAA_17
nSTAND3
RNA_helicase
NPHP3_N
AAA_33
TEBP_OB2-like
PhoH
AAA_24
nSTAND_NTPase5
Mg_chelatase
AAA_28
AAA_7
Parvo_NS1
ResIII
bpMoxR
Sigma54_activat
Dzip-like_N
Viral_helicase1
CLEC16A_helical
Motif
Other DBs
NCBI-GeneID:
115021986
NCBI-ProteinID:
XP_029308617
Ensembl:
ENSCGOG00000001734
UniProt:
A0A6J2RGR6
LinkDB
All DBs
Position
17:10946922..10955864
Genome browser
AA seq
438 aa
AA seq
DB search
MATNNNLQKAIDLASKAAQEDKAQKYEEALRLYQAAVQYFLHVVKYEAQSDKAKQSIRAK
CAEYLDRAEKLKEYLKKKENAPPAKPVKESQSDDKGNESDEGDDPEKKKFQNQLSGAIVM
EKPNIKWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKA
VATEANNSTFFSISSSDLVSKWLGESEKLVKNLFSLAREHKPSIIFIDEIDSLCGSRSEN
ESEAARRIKTEFLVQMQGVGNDNEGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPEEHAR
SFMFKLHLGSTPNSLNETDFVTLGKKTNGYSGADISVIVRDALMQPVRKVQSATHFKRVR
GPSRDDPNILEDDQLTPCSPGDPNAIEMTWMDVPGEKLLEPVVCMSDMLRSQANTKPTVN
EQDLGKLKKFTADFGQEG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacaataatttacagaaagccattgatcttgccagcaaggcggctcaggag
gataaagctcagaaatacgaggaggctctgcgtctttaccaggctgctgttcagtacttc
ctccatgtggtgaaatatgaagcacagagtgacaaagctaaacagagcatccgggcaaaa
tgtgccgaatacttggacagagcagagaagttgaaggagtatctaaagaagaaagaaaat
gctcctcccgctaagcctgtcaaagagtcacagtccgatgacaaagggaatgaaagcgat
gaaggtgatgatccagagaaaaagaagtttcaaaatcaactctcaggtgcaattgttatg
gagaaaccaaacatcaaatggaacgatgttgctggtttagagggagccaaggaggcactg
aaagaagctgttattctgccgatcaaattcccccatcttttcacaggaaagagaactcca
tggagagggatcttgctctttggacctccaggtacaggaaagtcctatctggctaaagct
gttgccacagaggcaaacaactcaaccttcttctccatctcctcatctgaccttgtctcc
aaatggctgggagagagtgaaaagttggtgaaaaatctttttagccttgccagggaacac
aagccttctatcatcttcattgatgagatcgactccctgtgtggctcaagaagtgagaac
gagagtgaggctgctcgccgtatcaaaacagagttcctggttcagatgcagggtgtgggg
aatgacaatgaaggagttctggtacttggggcaacaaatatcccgtggaccctagactca
gccatcagaagaagatttgagaagaggatctacataccgctgcctgaagagcacgcccgc
tccttcatgttcaagctccatctgggctcgacccccaacagtctcaacgagactgacttt
gtcactctgggcaaaaagacaaatggatactctggagcagatatcagtgtcattgtcaga
gacgctctaatgcagcctgttcgaaaggtccagtcagcaacccacttcaaacgggtacga
ggtccatcaagagatgaccccaacattttagaagatgaccaattgactccttgctcacct
ggcgatcccaacgcgattgaaatgacatggatggatgtacctggggagaagctattggaa
cctgtagtatgcatgtctgacatgctgaggtctcaggccaacacaaagccaacagtcaac
gaacaagacctgggcaaactgaaaaaattcacagcagactttggacaggaaggctag
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