Cottoperca gobio: 115022173
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Entry
115022173 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cgob
Cottoperca gobio
Pathway
cgob04145
Phagosome
cgob04814
Motor proteins
cgob05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115022173
09142 Cell motility
04814 Motor proteins
115022173
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115022173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgob03036
]
115022173
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgob04812
]
115022173
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
115022173
Cytoskeleton proteins [BR:
cgob04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
115022173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
115022173
NCBI-ProteinID:
XP_029308941
Ensembl:
ENSCGOG00000010097
UniProt:
A0A6J2RFH5
LinkDB
All DBs
Position
17:complement(14770486..14779357)
Genome browser
AA seq
630 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGESKRGGEAGGGHEDSDLERKRRE
AEMLLQSVGIAPDMPHVPAPMSPSNKSVGSDAGSQDSGDGNAGPRTLHWDPDPSTLQLHS
DSELMGRGAVRLGMSKVTQVDFAPKEMVSYCKETQTPTDAPTHTHQKADEEEDEEITAPP
TADDAQEEKDEHGEGQDEDSPKELTEEEKLQVLHSEDFLSFFERGSRIVERALAEHVDVC
FDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTCLDWSPQYPELLVASYNNNED
APHEPDGVALVWNLKYKKATPEYIFHCQSEVMSAGFAKFHPNLVVGGTYSGQIVLWDNRS
NKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSLEL
VFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGITEVFEGHHGPVTGLSC
HSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSCDYVYDAMWSPTHPALFACVD
LAGRLDLWNLNNDTEVPTASVFVEGAPALNRVRWAPSGKEIATGDSDGQVQVYDVGEQIC
VPKADEWTRFVRTLAEINENRDEAEELANV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctaaaagctgaactggagaggaagaagcaacggatcgcccag
attcgagaggagaagaaaagaaaagaagaggagaagaaaaagaaggatggagagtcaaag
cggggaggtgaggcgggcggtggccatgaagactctgatctggagaggaagaggagggag
gcggagatgctgctgcagagtgtcggcatcgcccccgacatgccccacgtccccgccccc
atgtctccctccaacaaatcagtgggcagcgatgcaggaagccaagattctggggacgga
aacgcaggaccaaggacattgcattgggatcctgacccctctactctgcaactccactcc
gactctgagctgatgggacgtggagccgtgaggctgggcatgtccaaagtgacccaggtg
gactttgctccgaaggaaatggtgtcctactgcaaagaaacacagacacccactgatgca
ccgacacacacccatcaaaaagcagatgaggaagaggatgaggagataactgctccccct
acagcagatgatgcccaggaggagaaagatgaacatggcgaagggcaggacgaggacagt
cccaaagagctgacagaagaagaaaagctgcaggtcctgcactccgaggacttcctgtcg
tttttcgagcgaggcagcagaattgtggagagagctctggctgagcatgtggacgtctgc
ttcgattacagcggcagagatctagaggataaggagggtgacttgcaggcaggtgcaaag
ctggttctgaacagacagtttgcagatgagcgctggactaaaaacagagtggtcacctgt
ctcgactggtcacctcagtatccagagctgctggtggcctcgtataacaacaacgaggat
gccccccatgagcctgatggagttgcactggtctggaacctgaagtacaagaaggccacg
cccgagtacatcttccactgccagtcagaggtgatgtcagcagggtttgcaaagttccac
cccaacctggtggtgggtgggacatactccggacagattgttttatgggacaacaggagc
aacaagcgcactcctgttcagagaactcccctgtctgcagctgcacacacgcatccagtc
tactgtgtgaacgtggtaggaacccaaaacgctaacaacctgatcagcatttccactgat
ggcaaaatgtgctcctggagcctggacatgctctcccagccacaggacagtctggagctg
gtcttcaaacagagcaaggcggtggccgtcacctccatggcctttcctctgggcgacgtg
aacaactttgtggtggggagcgaggacggctcggtttacacagcctgtcgccacgggagt
aaggcgggtattactgaagtgtttgagggccatcatggtccggtgaccgggctgagctgc
cacagtgctggaggacccgtcgacttctctcacctcttcatctcctcctcttttgactgg
actgtcaaactctggagcaccaagagtacccgtccgttgtactcgttcgaggacagttgt
gactatgtttatgatgccatgtggtctccaacacaccctgctctgtttgcttgtgtggac
ctggctggacgcctggacctgtggaacctcaacaatgatacagaagtacccactgccagt
gtgtttgtggagggggctccagccctgaaccgtgtgagatgggctccctccggaaaagag
attgctactggggactcggacggacaggtgcaggtctacgacgtaggggagcaaatctgc
gtgcctaaggctgacgagtggacacgctttgtcaggacgctggctgagatcaatgagaac
cgagatgaagctgaggaactggccaacgtctga
DBGET
integrated database retrieval system
