KEGG   Cottoperca gobio: 115022187
Entry
115022187         CDS       T07513                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
cgob  Cottoperca gobio
Pathway
cgob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115022187 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgob03019]
    115022187 (exosc4)
Messenger RNA biogenesis [BR:cgob03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     115022187 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     115022187 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 115022187
NCBI-ProteinID: XP_029308963
Ensembl: ENSCGOG00000022344
UniProt: A0A6J2RDM5
LinkDB
Position
17:9843806..9846169
AA seq 265 aa
MGNVVQRQTRGALRFEVCGNMAGLELLSDQGYRLDGRKASELRKVQARMGVFAQADGSAY
LEQGNTKALAVVYGPHEVRGLRSRIRHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMS
LHLKQTFEAAVMTQLYPRSQIDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCAC
TVGFVDETPLTDLCHAEESGGVSSLALALLPRGGQIALLQMDARLHQDHLESLIEAAMTA
CKGVSKVLDEVVRQHLQEVSVLSGE
NT seq 798 nt   +upstreamnt  +downstreamnt
atgggtaatgtagtacagcggcagacacgtggggcgttgcgtttcgaagtttgcggaaac
atggcgggtctggagctgctgtcggaccagggttaccgtttagatggaagaaaagcctct
gagctgcggaaggttcaggcccggatgggtgtgttcgctcaggcggacggttcggcgtat
ttagagcagggaaacactaaagctctggctgtggtttacggtccacatgaagtacgaggt
ttacgcagccggattcgtcatgatcgagctgttatcaactgtcagtacagcatggccacc
ttcagcacagcggagaggaagaggagaccacacggggaccgcaagtccactgagatgagc
ctccatctcaagcagacttttgaagctgctgtgatgacccagctctacccacgctctcaa
atagacatctatgtcaagattctgcagtcagacggcggtaactacagcgtgtgtgtgaat
gctgccactctggcggtgattgacgccggcatccccatgagggactacgtgtgtgcctgc
accgtcgggtttgtggatgagacgcccctcactgacctttgccatgcagaggaaagtgga
ggagtgagctctctggccttagcgctgctgccacggggtggacagatcgccctgctgcag
atggacgccagactacatcaggatcacttagagtctctgatcgaagccgccatgacagct
tgtaaaggtgttagcaaggtgctggatgaggttgtgcgacaacatctccaagaagtttct
gtgctctccggagagtga

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