Cottoperca gobio: 115022241
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Entry
115022241 CDS
T07513
Symbol
chd8
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
cgob
Cottoperca gobio
Pathway
cgob04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115022241 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgob03036
]
115022241 (chd8)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115022241 (chd8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_CHD1_Hrp3
Chromo_MIT1
RcpB
Motif
Other DBs
NCBI-GeneID:
115022241
NCBI-ProteinID:
XP_029309064
UniProt:
A0A6J2RG02
LinkDB
All DBs
Position
17:18585289..18604231
Genome browser
AA seq
2575 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDTFSQGSSDPVEEALKLALGHVDPPTETELTVNAGLGV
SVAAPAIPDPAPVFVPTQQPVPVATAQTVSIAVAPVPAPVDTIPQIQAHTTIPIVTTVAT
SSNVLLSSPLTVSSSPLTTATTQQLTQITHQLTPQQLAAITQQGGGKIVILKGPQGHAQV
LQTISGATGQTSGKVIRVLSGTPIKPGMSILQGGTVLNQASPGQTQVKVSAAGMQRLLQA
SNGPMKQMLLTSMPQQTQGQTVQVQIPTQAHLTQGHTQVQVQPQATQIHVPGQVQLQPAM
QAQSQGGEAKRITLVLQQPSQMGSAAVAGQAQQQITQVQQLQTGGQQQVSTRLVLGQLPG
GKLVLQGSQLAALTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGVKYQLVSGTGNTGGPQ
VLQISQGQGGQRVAVPLKMLLQPQTSSGSSLGSTVSVVKVINTSAAGPSTTTTIPSQAIR
ITKAPGEPASVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELPATQTSPEL
GGTVTVVSTAKKKSGGGGSKKKSPVAGGAMPKTTGGSDKKSKVKTPGATTGVSGGTVIPG
AGNKSKSKTKTNTITLVGAKKRKRNASSDHSDGELSPASPAALDDDLITKRRSNRVVKRK
KYTEDLDIKITDDEDEQEDVDVTTTTAVVPSISGGTAAQLKQELELDADGQPSMQFFVEN
PSEEDAAIVDKVLSLRLTKKEVCQGQYTNVEEFFVKYKNYSYLHCEWASLNQLEKDKRIH
QKIKRFKIKHAQMRHLFQEEEEAFNPDYVEVDRILDVSHSVDKDNGEPVIYYLVKWCSLP
YEDATWELKEDVDEGKVEEFSKILNRQPRLKRMPRPSASSWKKLEETREYKNSNILREYQ
LEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEEYDAGVTGPFLVIAPLSTITNWE
REFCTWTDMNAIVYHGSLASRQMIQQYEMYFKDDKEHLIPGAYKFDALITTFEMVLSDCP
ELREISWRCVIIDEAHRLKNRNCKLLDSLNMLDLEHKVLLTGTPLQNTVEELFSLLHFLE
PTQFSSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTD
VQKKYYRAILERNFTFLSLGAHSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIVAELRE
VYDPMASDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRY
LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQ
NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKEGTVN
GQVQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIENEGKGSTF
SKASFVASENRNDIALDDPEFWQKWAKRADIDMDTMNRKNTLVIDTPRVRKQTRQFSSLR
GEGGDLSDPDSDDEYPPANSRQSRASRRSDRHSGGGYGRTDCFRVEKHLLVYGWGRWKDI
LSHARCKRRLSERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPQTLLNHS
GLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKVLLRVRM
LYYLKQEVIGEHADAVLKGADGRDVDIWMPEMEQQEFPAGWWDTEADRSLLAGVFKHGYE
MYTTMRADPCLCFLERAGRPDDKAIDAEQHTGDAELGDDADYDKYSEDPEFKPASRHAKD
LFDEVXSVSVDDEISVEDKLGPVITAESFSNHSGACDWPSSSSLTARLRRLITAYQRSYR
QEQLKIEAEAKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVEKIKKE
PGLPDRGDPDFDWNRFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRTGRGEDSVEHSQ
TVAPITEERASRTLYRISLLRRLRERVLPHPSLEERLPLAPTSSELPAWWNMPEHDRQLM
LGSALHGVSRTELSIYSDPQFTFSQARDEFTLNQQAAPPPPQASAIMPIMPLMPLMPLMP
LMPLSQPKTEEDVPGVKEEVAEEDVRLLASEISADLQSTPLSHHDGKARGQAWSLKRSRG
RAGKTGGRKGEGGSDSDSESDSGSSSSGRSGSSDESGESEEEVERARMKMCDVDEDNSLL
SMTTSQDGLLPPDPLRVDWPKDRVLINRLDSLCTLTLTGQWPSGRRYMPEAQLAPSSELA
GDEMAYTRVIRKPGGTPGGPGEEGEDGEFTVKLLKEEGLKLTFSKQAMMPNGSGGEGSGR
KRRKDQDLSDPDGLNDPLERTPRRRDPPTWLKENPDYEVEGDMLELLVNRSKRKRRRRAD
KALTGSEKVKVINMRTGKKVGAAFCPMLQDLREYLEGNPDNAVASDWSETVRNSGFLPET
LFHRLLTEHSDIPKKSRRRHHHHHHHHHHTPEPTPEDPNLDGVEEETLVSDGAYMMDEED
LETSHHFLTSPDFDVKMEGGDSLSQGDYDSSDQEALLDDVIIAQKDSDSSSSSED
NT seq
7728 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctatttgaggacacaccgctgtttaacctcgacgccctg
ccggatgataccttctctcagggctcctcagaccccgtggaggaggcccttaagttggcg
ctgggccatgtggacccaccaaccgagactgagctcacggtcaacgcagggcttggtgtt
tctgtagcagctcccgccatcccagaccctgcccccgtttttgtccccacacagcagcca
gtgccagtggcgactgctcagactgtttccatagctgtagccccagtccctgccccggtt
gatactatacctcagatccaggcccataccaccatacccattgtcaccaccgtggccacc
agtagcaatgtcctgctgagctcacctctgactgtttccagctccccactcaccaccgcc
accacgcagcagctcacacagataactcatcagctcactccgcagcagttagctgccatc
acacagcagggcggtggtaaaattgtcattctcaaaggtccccagggtcatgcccaggtg
ctgcagactatatcaggagccacagggcagaccagtggaaaggtcatccgtgtgttgtct
ggcactcctattaaaccgggcatgtccatactgcagggggggaccgtcttgaatcaggca
agcccgggacaaactcaagtcaaggtgagcgctgcagggatgcagaggctgctgcaggct
tctaacgggccaatgaaacagatgctgctgacctccatgccccagcagacacaaggccag
acagttcaggtgcaaatccctacccaagcacacctgactcaaggccatactcaagtccaa
gtccagccccaggctactcagatccatgttccaggccaggtgcagctccagccagccatg
caggcacaatcacagggtggcgaagcaaagcggatcaccctggttctccagcagccctca
cagatgggctctgctgcagtagcgggtcaagctcagcagcagatcacacaagtgcagcag
cttcagacagggggccagcagcaggtttcaactagactggtgctggggcagctccctgga
ggaaaactggtgcttcagggaagccaactagcagccctgacccaggctcgagctgcaggc
caagctggagggcagcccaaagtcctcacaattcagctgcaggtgcagcagcagcccaac
caacaaggaggagttaagtaccagctggtctcaggaactggcaatactggcggcccacag
gtgttgcagatctcgcagggccaaggaggacagagagttgcggtgccactcaaaatgctt
ctgcagccacagaccagctcaggatcctcgcttggcagcacagtctctgtggtgaaggtc
atcaacacgtcggcagcaggcccctccactacaaccaccattccgtcccaggccatccgc
atcaccaaggctcctggcgagcctgcctctgtgcgacgagtcgagattctgtgcaagcag
gagaaagcaaaccgtattgtggctgaagctatagcacgggccaaagcgcgcggtgagaag
aaccttccaagagtcctgaaccaggacgagcttccagccactcagacctccccagaattg
gggggcactgtgaccgtggtgtctactgctaagaaaaagagtggcggaggaggaagcaag
aagaaaagtcctgtagctggaggagcgatgcccaaaaccacaggaggttcagacaaaaag
agcaaagtgaagaccccaggagcaacaactggagtgtctggaggcacagtgatacctggg
gctggaaacaagagcaaaagcaagactaagacaaacactattactctcgtgggagccaag
aaaagaaagagaaatgcgtcctcggaccactctgatggggagttgagccctgcctcacct
gctgcgctggatgatgacctgattacgaagaggcgctccaatcgcgtagtgaagaggaag
aagtacactgaggacctggacatcaagataacggatgatgaggacgagcaggaagatgtg
gatgttactacgaccacggcagttgtgccctccatcagtggcgggacagcagcgcagctt
aaacaggagctggagctggatgctgacggacaacccagcatgcagttctttgtggaaaac
ccaagtgaggaagatgctgctattgtagacaaagttctgtctttgaggttaaccaagaag
gaagtgtgccagggccagtacaccaatgttgaggaattctttgtaaaatacaagaactat
tcgtacttgcactgtgagtgggccagtttgaatcagctggagaaagataagaggatccat
cagaagatcaagaggttcaagatcaagcacgcacagatgaggcacctcttccaggaggag
gaggaggcttttaacccagactacgtagaggtggacaggatcctggacgtctcccacagt
gtggacaaggacaatggcgagcctgttatctactacttggtgaagtggtgctctctgcct
tatgaagatgcaacttgggaactgaaggaggacgtggacgagggcaaggtcgaagaattc
agcaaaatcctaaacagacaacctcgcctgaaaagaatgccacggccatctgccagttca
tggaaaaagttggaggagacaagagagtacaagaattccaacatactcagagaataccag
cttgaaggagtcaactggctgctcttcaactggtacaacaggcagaactgtatcctggca
gatgagatgggtctggggaagaccatccagtctatcgcgctgctgtctgaagagtacgat
gctggagtcacaggcccgttcctggtcattgctcccctctctaccatcactaactgggag
agggagttctgcacatggaccgacatgaacgccatcgtctaccacggcagcctggccagc
cgacagatgatccagcagtatgagatgtacttcaaggatgacaaggagcacttgatccca
ggtgcttacaagtttgacgccctcatcacaacatttgagatggtgttgtctgactgccca
gagctgagggagatctcctggcgctgtgtgatcattgacgaggctcatcgcctcaagaat
cgtaactgcaagctgttagacagcttgaatatgttggatctggaacacaaggtgttgttg
accggcactcctctgcagaacactgtggaggaactcttcagcctgcttcatttcctggag
cccactcagttctcttctgagactgaattcctcagagactttggagaccttaaaacagag
gaacaggttcagaagctgcaggccatcttgaaacccatgatgttaagaaggctcaaagaa
gatgttgagaagaacttggcacccaaacaggagaccatcattgaggttgagttgacggat
gtccagaagaagtactaccgggccatcctggagaggaacttcactttcctcagtttaggt
gcacacagtaacagcaatgtccccaacctgctcaacactatgatggagctgcgcaagtgc
tgcaaccacccctacctcatcaatggcgcggaggagaagattgtggcggagttgcgggag
gtgtatgatcccatggcctccgacttccatttgcaggccctgattcggtctgccggcaaa
ctggtgctactggacaagctgctgccgcgcctcaaggctggtggccacaaggtgctcatc
ttctcccagatggtgcgctgcttagacattctggaggactacctcatcaacaagagatac
ctttatgagcgaatcgatggcagagtccgtgggaacttacgacaagctgccatcgaccgc
ttcagcaagcctgactcggaccgctttgtcttcctgctgtgtacccgtgctggcggcctg
ggtattaacctcactgctgctgacacgtgtgttatatttgactctgactggaaccctcaa
aacgacctgcaggctcaagcacgttgtcatcgtattggccagtctaaggcggtcaaggtc
taccgtctgatcactaggaactcttatgagagggagatgctggataaagcaagtctgaag
cttggcctggaccgtgccgtcctgcagagcatgagtggaaacaaagaaggcaccgtcaac
gggcaggtccagcagttctccaagaaggagattgaggaccttctgaggaagggagcctac
gctgccatcatggatgagaatgatgaaggcagtcgcttctgcgaggaggacatcgaccag
atccttcagcgaagagccaccaccatcaccatcgagaacgagggcaagggctccacgttc
tccaaggccagcttcgtggcctctgagaaccgcaatgacattgccctcgacgaccccgaa
ttctggcagaaatgggccaagagagccgacatagacatggacaccatgaacagaaagaac
accctcgtgatcgacactcccagagtccgcaagcagactcgccagttctccagtttacga
ggtgaaggtggagacctgtctgatccagacagcgacgatgagtatccaccggccaattcc
agacagtcgcgggcctcccggcgctccgaccgccacagtggagggggctacggccgcacc
gactgtttccgggtggagaaacacctgctcgtctatggttggggtcgctggaaggacatc
ttgtcccacgcaagatgtaagcggcgtctgagtgaacgcgacgtggagaccatctgccgt
gtcatcctggtcttttgtctgctccactaccgtggagatgagaacatcaagagtttcatc
tgggagctcatcacaccgccggagaacggccgcgaaccccaaacgctactcaaccactct
ggcctgtctatccctgttccaagaggcaggaagggtaagagggtaaaggcccagagcacg
tttgatgttcagaaggtggagtggatccgcaagtacaaccctgacaccctgcttctggac
gacagctaccgcaagcacctcaagcaccagtgcaacaaggtgttgctgagggtgcgtatg
ctctactacctgaaacaggaggtgattggagaacatgcagacgctgtcctgaaaggggct
gacggcagggatgttgatatctggatgcctgagatggagcagcaggagttccctgcagga
tggtgggatactgaggcggatcgctcactgcttgctggtgttttcaaacatggttatgag
atgtacaccactatgcgtgctgatccctgcctctgcttcctggagagagctggtcggcct
gacgacaaggccattgatgccgagcagcacactggtgatgcagagttgggagacgatgcc
gactatgataaatactcagaggacccggagttcaagcctgcgtcaagacacgccaaagat
cttttcgatgaggtttgatccgtctctgtggacgatgagatttcagtggaagacaagttg
gggccagtgatcacagcagaaagcttttccaaccacagtggtgcgtgtgactggccctcc
agctcatcgctgacagcgcggttgcggcggctgattacagcctaccaacgcagctacagg
caggagcagctgaagatcgaagcagaggcaaagggcgaccgcaggcgcaggcgctgtgaa
caggccagcaagctgaaggagattgcacggcaggagcgccagcagaggtggacacgtaga
gaagaatgcgacttctaccgcgtggtatcgacttttggtgtggaaaagataaaaaaggag
ccaggtctccctgacagaggagatcctgattttgactggaaccgcttccgtacctttgct
cgtctggataaaaaaacggacgagagcctcagtcgatacttccgctcttttgttgccatg
tgccggagagtttgccacctgcgcacaggccgtggtgaagattcagttgagcactcccag
actgtggcccccatcactgaggagcgtgcttcccgtactctttaccgtattagcctcctg
cgtcgcctccgtgagcgagtgctgccccacccatcgctggaggagcgtctgcctctggct
ccgaccagctccgagctgcccgcttggtggaatatgccagaacacgatcgtcagctgatg
ctaggctccgccctgcacggcgtcagccgcacggagctctccatctattcagacccacag
ttcaccttcagtcaggctcgggatgagttcaccctgaaccagcaggccgctccacctcca
cctcaggcatcggccatcatgcccatcatgcctctcatgcctctcatgcccctcatgccc
ctcatgcccctcagtcagccgaagactgaggaggatgtgcctggtgtgaaggaggaggta
gctgaagaggacgtccggttgcttgcaagtgaaatcagtgctgacctgcagagtacgccc
ttgagtcaccatgatggcaaggcacgagggcaggcctggagcctcaagaggagcaggggg
agggccggaaaaacaggaggaaggaagggagagggggggtcggattcagattctgagtct
gattcaggctcatcgtcatctgggcgatcgggcagcagcgatgaaagtggagagagtgag
gaagaggtggagagagctcgcatgaagatgtgtgacgtggatgaagacaatagtttactc
tccatgactacatctcaggacggccttcttcctcccgatcctctcagagtggattggccc
aaggaccgtgtgttgatcaaccgtctggacagtttgtgtacgctgacgctgaccggtcag
tggccctcagggcggcgctacatgcctgaggctcagctcgccccgagctcagagctggcg
ggagacgagatggcctacacaagggttatccgtaaacccggaggcacgcctggtggccct
ggggaagaaggagaagatggagagttcactgtgaagctcctgaaggaggaggggttgaag
ctgaccttctctaagcaggccatgatgcccaacggatcagggggagagggcagtggccgc
aagaggcgcaaggaccaagacttatcagacccagatggactcaatgatccactggagcgt
actcctcggcgcagggacccccccacctggttgaaggagaacccagattatgaggtggag
ggagacatgctggagcttcttgtgaacaggagcaagaggaagaggaggaggagggcagat
aaagccctgacaggcagtgagaaggtcaaagtcattaacatgaggacaggaaaaaaggtt
ggagctgctttctgtccgatgctgcaagacctgagggaatatcttgaggggaatcctgat
aatgctgtcgcgtccgactggtctgagactgttcggaactctggcttcctgcccgagacc
ctcttccaccgactgctgaccgagcactccgatatcccgaaaaaaagccgacgccggcac
catcaccaccaccatcaccatcaccacactccggagcccacccccgaagatccaaacttg
gacggagttgaagaggagaccctggtctcagacggagcctacatgatggacgaggaggac
ctggagacctcccaccacttcctcactagtccggactttgacgttaaaatggaaggcggc
gacagcctttcccaaggtgactatgacagctcggatcaagaggcgctattggacgatgtc
atcatagcacagaaggactccgactcctcatcaagctcagaggattga
DBGET
integrated database retrieval system
