Cottoperca gobio: 115022246
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Entry
115022246 CDS
T07513
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
cgob
Cottoperca gobio
Pathway
cgob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115022246 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115022246 (smg7)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
115022246 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
115022246 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
115022246
NCBI-ProteinID:
XP_029309069
Ensembl:
ENSCGOG00000014868
UniProt:
A0A6J2RG08
LinkDB
All DBs
Position
17:complement(314706..343880)
Genome browser
AA seq
1139 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPSRV
KSSQLGIISNKQSSTSAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIRAFIKFHGHVYLSKSLDKLDDLREKLEEQFQRLILQKAFSTQQLVHITVIN
LFELHHLRDLTADEQSYSSEQQISWFQLLGLFMSFLGVMCSRALLNKSRGGEIMGECPLP
AVKVSLDWLKLRPSVFHEAAVDQRQHVWPWLVSILNSFQPKEDDVSCTSVTPLPEEFELQ
GFLALRPALRYPTPSVSGGVNVQRSLDFTKGHQGILVDRDGLPVHTRHQRLISLGKWVAD
NQPGLIQCSVSEDGLLLFITDIPEQAIEEPQEKEAPVLQESSNAEQTANDGGNSGLKSVL
SAGKTQSSWPDGSDRPVVTFKENIKPREQSREPTRSHHLKDSGKERRDFAKGNGAAGKGE
LKRDGKRKSELKKAGHERSTDAGKQVKAQTELRKTPVSEAKKTPVSQTQTTCSTQFIPIH
HPGAFPPLPSRPGFPPSAYVIPPSVAFPGLQVNPGFTFSTGVSVPGPFLQPGVHTQAGGQ
AGKPSHIPYSQQRPSGPGPGQGPGSSGPPQGQQPQNLQQSVQLQVQAMNQQQQSPTKPVQ
QVGMGKSPPHHPGMQQYMQVQDQPAQMWSQAQAALQKLSPLQMSLKPQTFYLAAQDPLKL
YEHQLQPPAQPQLSNMDKKIKYPNVKMQDFYWDPSYRMGDGLAVMADRMKRPPPGGMCGE
QDGPAGPRGPPFELPNQTRMESGPEVVSQSSLLPMSGFPMQEYNQNSIFSQAYGKNLPPS
SKPDAPMMHQEPSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHGA
MPFSNFGPIGTPDSRDRRVVDRWKSDKTGAVSGFGLDYLPAAASSAASDSSWHQAGPTGS
SWTNQESPMEESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHGAMNPPH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaacctatgtgcccaatatctacgacaggcagaggccctgaaggcggacatgacagat
tcaaagctgggggcggcagaagtgtggacgtcccggcaggccctgcaggatctgtaccag
aagatgctggtgactgacttggagtacgctctggacaagaaggtggagcaagacctgtgg
aatcatgcttttaagaaccagatcaccacgctgcagagccaggccaagaacagagccaac
cccaaccgcagcgaggtccaggccaacctgtcgctgttcctggaggcagctagtggtttc
tacacacagttgctgcaggagctgtgcacggtgttcaacgtggacctgccgtctcgcgtc
aaatcttctcagctcggcatcatcagcaataaacagagcagcacgagcgccatcgtcacc
ccgcagcccagctcctgctcctacatctgccagcactgcctcgtccacctcggagacatc
gcacgttatcgtaaccagaccagccaggcggagtcgtactaccgacacgcagctcagctg
gtcccgtcaaacggtcagccgtacaaccagctggccatcctggcctcctctaaaggagac
cacctcaccaccatcttctactactgccgcagcatcgcagtcaagttccccttcccagca
gcctccaccaacctgcagaaggctctttccaaggccctggagagccgcgatgaggtgaaa
accaagtggagcgtgtcagatttcatcagggccttcatcaagtttcacggtcacgtctac
ctgagcaagagtctcgacaaactggacgatctgagggagaaactggaggagcagtttcag
aggctgatcctgcagaaagccttcagcactcagcagctggtccacatcaccgtcatcaac
ctgtttgagctgcaccatctcagagacctgaccgctgacgagcagagctacagcagcgag
caacagatcagctggttccagctgctcggcctcttcatgtccttcctgggcgtcatgtgc
agccgagctctgctcaacaagagccgaggcggggagatcatgggggagtgtcctctgccg
gccgttaaagtttctctggactggctcaaactgagacccagcgtgttccacgaggccgcg
gtggaccagaggcagcatgtgtggccctggctcgtctccatcctcaacagtttccagccc
aaagaggacgatgtgagctgcacctcagtgacgcccctaccagaggagtttgagttgcag
ggtttcttggcgctccggcccgctttgaggtaccccactccttcagtcagtggtggggtg
aatgttcagaggtccctggacttcactaaaggtcatcagggcatcctggtggacagggat
ggcctgccggtccacactcgacatcagagactcatcagtttgggcaaatgggtggccgac
aaccagccggggctgatccagtgcagcgtgagtgaagacggcctcctcctcttcatcact
gacattccagagcaggccattgaggagccgcaggagaaggaggcgccggtgttgcaggag
tcgtccaacgccgagcagacggccaacgacggcggcaactccggcctgaagtcggtgctg
tcggcggggaagacgcagagctcgtggcccgacggcagcgaccgacccgtcgtcaccttc
aaggagaacatcaaacctcgggagcagagccgcgagcccacgcggagccatcacctgaag
gacagcggcaaggagcgccgagacttcgccaaaggcaacggggccgctgggaaaggagag
ctgaagagggacgggaagaggaagagcgagctgaagaaagccggtcatgagagaagtact
gacgctggaaagcaggtgaaggcgcagacggagctgaggaagactccggtgtccgaggcg
aagaagactcctgtctctcaaacgcaaaccacctgctccacacagttcatccccatccat
catcctggagccttccccccgctgcccagcagacctggtttcccgccctcagcctacgtg
atcccgccgtcggtggcgttcccggggctccaggtgaacccgggcttcacgttctccacc
ggcgtgtccgtccccggacctttcctccagccgggcgtccacacccaggccggcggccag
gccgggaagccgtcgcacattccttacagtcagcagaggccctctggtcccggtccgggt
caggggccgggctcctcgggccccccccagggccagcagccccagaacctgcagcagtct
gtccagctgcaggtgcaggcgatgaaccagcagcagcagtctcccaccaaaccggtccag
caggtcgggatggggaagagtccacctcaccacccggggatgcagcagtacatgcaggtg
caggaccagcctgctcagatgtggagccaggcccaggctgctctgcagaagctgtccccc
ctgcagatgtccctgaagcctcagaccttctacctggcggctcaggatcctctgaagctg
tacgagcaccagctgcagcctcctgcccagccgcagctctccaacatggacaagaagatc
aagtaccccaacgtcaagatgcaggacttctactgggatccgtcgtacaggatgggggac
gggctggccgtgatggccgacaggatgaagaggcctccgccggggggaatgtgcggcgag
caggacggccccgccgggccccgtggacccccgtttgagctgcccaaccagacccggatg
gagagcggacccgaggtcgtcagccagtcctctctgctgcccatgtccggcttccccatg
caggagtacaaccagaacagcatcttcagtcaggcctacggcaagaacctgccgcccagc
tccaagcccgacgctcccatgatgcaccaggagccgtccctctactccctgttcgaaggg
actccctggtccccgtccctccccgccagctcagatcactccaccccggccagccagtcc
cctcactcctccaaccccagcagccttccgtcctccccccccacacacaaccacggagcc
atgcctttctctaactttgggcccattggcactccggacagtcgggaccgcagggtggtg
gaccgctggaagtccgacaagactggagcagtcagcgggtttggactggactaccttccg
gctgcagcctcctctgcagcttcagacagcagctggcaccaggccgggccgaccggcagc
tcctggaccaatcaggagtctccaatggaggagtcgtcctccaccgtgctgctcgacagc
ctcaagtccatctggtcgagctccatgatgcagccgggcccgtcggcgctggagcagctc
ctcttgcagcagaaacagaagcagcagcgaggtcacggcgccatgaacccgcctcactga
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integrated database retrieval system
