Cottoperca gobio: 115022406
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Entry
115022406 CDS
T07513
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115022406
Enzymes [BR:
cgob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
115022406
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
115022406
Prokaryotic type
115022406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
115022406
NCBI-ProteinID:
XP_029309247
Ensembl:
ENSCGOG00000020402
UniProt:
A0A6J2RIE7
LinkDB
All DBs
Position
17:20902504..20911458
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AA seq
544 aa
AA seq
DB search
MLHCIWRSSFLRQLLGVVAHTYQRPSSVLFPLTKSFTGQTIMSDKKRKSTSSAKEPSAKQ
QKVAPMKERGWLQDSLKQLRTEKKEMKLNKKRLRFISDTEKIKQGSEGVLYWMSRDHRVQ
DNWALVRAQRLALKEKLPLHICVCLVVPESELSTLRHFSFMLKGLEEVAKECKVLDIQFH
LLHGSAGDVLPGFVSDRGLGAVLTDFSPLREPLQWLEDVKKALPKDIPLIQVDAHNIVPC
WVASPKLEYAARTIRGKITKLLPEFLTDFPLVEKHPYTATKPAKPVDWEETLASLQVDQA
VGEPEWAKPGTKGGVAMLESFIDERLKVFDTQRNDPNVAGLSQLSPWIRFGHLSAQRVAL
QVQCSGKSAGHSVASFIEELVVRRELTDNFCFYNKKYDRVEGAYEWAQKSLKDHAKDKRE
YLYTREQLEKAKTHDKLWNGAQYQMVTEGKMHGFLRMYWAKKILEWTSSPEEALSIALYL
NDRYSLDGQDPNGFVGCMWSICGMHDRAWAERAVFGKIRYMNYKGCQRKFDVARFERRHC
PKKL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttgcactgcatttggaggagctctttcttgaggcagttattgggggttgttgcccac
acttatcagagaccctcttcagtattattccccctgaccaagtcattcactggtcaaact
atcatgtcggacaaaaagcgcaagtcaacatcttctgctaaagagcccagcgctaagcag
cagaaggtggctcccatgaaggagaggggctggctgcaggacagtttgaagcagctcagg
acagagaagaaggagatgaaattgaacaaaaagcgcctccgctttatatctgacactgag
aagataaagcagggctcagagggggtcctgtactggatgtcaagagaccacagagtacaa
gataattgggcgttagtccgtgcccagcggcttgccttgaaggagaaacttcctctacac
atctgtgtctgtctggttgtcccagaatcagagctgtccactctgagacatttcagcttt
atgctgaaaggtctggaagaagtagcaaaggaatgcaaagtcttagacatccagttccac
ttgctgcatggttcagcgggggacgttctccctggctttgtgtcggaccgtggcctgggc
gcagtgttgacagacttctcccccctcagagagccgctgcagtggttagaggatgttaaa
aaggctcttccaaaggacattcccctcatacaggttgatgcccacaatattgttccctgc
tgggtagcatcacctaaacttgagtacgctgccaggacgatcagaggaaagatcacaaag
cttttgccagagttcctcacagactttcctctggtagagaaacacccctacacagctaca
aaacccgccaaaccagtggactgggaagaaaccctggcctccctgcaggttgaccaagca
gtaggagagccggagtgggctaagcccggcacaaagggaggggtggccatgttggagtcc
ttcattgatgaacgcctcaaagtgtttgacacccaacgcaacgacccaaacgttgccggc
ctcagtcagctgtcgccctggatccgctttggccacctgtcagcccagcgtgtggcgctg
caggttcagtgcagtgggaagtctgcaggtcattctgtcgcctccttcatcgaggagctg
gtggtgcgcagggagctgacggacaacttctgcttctacaacaagaagtacgaccgcgtg
gagggtgcgtatgagtgggctcagaagtctttgaaagatcatgccaaagacaagagagag
tatctctacacccgcgagcagctggagaaagcaaagacacatgacaaactctggaatggc
gctcagtaccagatggtcactgaggggaagatgcatggtttcttgaggatgtactgggcc
aaaaagatcctggagtggacttcttcaccagaggaagcgctctccatcgctctataccta
aacgatcgctatagtctggatggccaggaccccaatggctttgtcggttgtatgtggtcc
atttgtggcatgcatgaccgggcctgggcagagagagccgtttttggaaagatccgctac
atgaactacaaaggctgccagcggaagtttgacgtagcgcggtttgagagaagacactgt
cccaaaaaactttga
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