Cottoperca gobio: 115022433
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Entry
115022433 CDS
T07513
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115022433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115022433
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115022433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
115022433
NCBI-ProteinID:
XP_029309267
UniProt:
A0A6J2RIG3
LinkDB
All DBs
Position
17:22415134..22452817
Genome browser
AA seq
2472 aa
AA seq
DB search
SLPHTEQQYFDIEKRLSESQEQILSSTRDLQTLKEENKKLNEELSTLKGIEGETLEDKPP
QQQTKAKYEIEAEKRELARLLEKRTQEAENLSEDVKRLNEKLTETSKVKMELQLKLDGIQ
SSEASLQHREKRMEQEKELQTKKIKWLTEQLKTKTEELLNTTREKGKDILQLQGGLKNGK
EQVTRLDRQLTSLKQTSESQGRRAEDLNNKLKQSKDELSAMEEKYRNELNAHVKLSSLYK
VRTATMETKNQELSRAVQELSKLVKDSGEANKALEKKVSEGEELKTRLEAELREKVKKME
KELENATMKAAGKRCCVPSLTDEQLDAMCPSAAAIAAIVKPGMKFFDLYNAYAECQTHLQ
LEKQETRRVSRVLDEIVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQK
EKEEAKQCCDAMERDKLRTERQLEDTSAQVCTLLVELEEARGNKVTKDDGSSANISSTSE
VISPRQLSFRSVEQLQRQNQSLLGRVRELEEEKDRQKSQVTSARVSELEASVDKLQKEVE
QLREQRNQQKQLAESNARQRDMYKALLTQSTGFSLPPQGLDSSSQPAPVKPSVPATRSTP
QRAAAAESAQTIQTKAALKQLNDAFSLYKKEKAENDRMLNETNDRLQRQLTDLRSSHTKL
TSQLEFSSKRYEMLQETVSAYRREISALQDRNQKMSATAQRHEQIIHTMSQDLRQANEKL
ALEEVRVENLTKEKDILRQAESRLNREKEAVLAEQRNQNLLLTNLKTIQLNMERTETETR
QRLNSKMENLEAELVLMKTRQDQEVAQRHALGRTMDVQLLEAKKQLETQNTLQQKTRELL
RGAEQQVAALKAQLASASSSEAVTTSSSMTTAATRAAGLRAPLRVRSPVPAASQQLSQSE
QEIAEVKSLLRTAEELNGEIAEQLKNANATVEQYRAVVLTLEDSLKKEKESRSPLELRLK
ESEEVQKQLEKAILEAEKMKQQEREERRKAVDAVEKQVCEVQRSLKSSQAEQQEALERAA
TAVTLEQKAVQDSLLQTKLAGEAQAKYERELMLHAADVEALQELKKRSQQGVAQNRELEE
QLNKISSLLQEKTVALNTVERQLKEDLSTQSRRCVELGKQNTLLHQQMDEMATKSSRMQK
QQQQLLDLSFTEEGKTTEQILEILRFVRREKEIAVACGEASGEEALRYKQRVEHQDRELK
ELQEALNSERENMQATAKTLALQEEQLKKMETIGALQDANRMLKMERERLEQELLQAQAK
VKKLQSDISPLHQSLSLLSEKNGSMQADKRILEEDLKRWKAKTQQLVSQQKDGDVEERQK
LATEREAQQRRITQLAEETGKLKTELARSSASSNSAQSQLQALRDSVARLTSERDGLKKD
LETKNSDILEKNRTITQVKKIGRRYKTQYEELKALHDKLVVDTAAKAGSEAGPSHEVQQD
LTKAQEELNTLKEEMQKKVEEAQKSQQELEEAKKENQQTKDKLQEVQNQLTQKQNQLTQV
QSQFSQTQTQQQQNQNQLTQSQKELQQAKTHSQQVQNQLKSAQSQAQARQNQIQQIQREL
LQAKEALQQNLANQKELQQTNQSSQQSHNQEVSNIKTALSQAESKVTEFQGRLDSQQKMV
GEREADIKRLQEQLTEANQANEASRATQANQNQSSQSIQAGDSNVASDANQAQQEELTKL
RQELSESKNREEQLKKQISEKEEKTKKVFMGAKTKINQLNGAKEQLSQEIEQMKQSKEEL
EVRMNALKSQYEGRFLRLDRELRELRETQSQSDAREEPQDQSGAKVGDQARSADQRQISL
KSPAQDRGSSSLSDPPTANIRPTTSTPSPSNKPSPSPGSKATPRASVRPMVTPATVPIPT
PTATVMPTTQTDSQEVLMTAGAVVHSTSSSLVNTPTSITQPTSTQATAFVQPTQQQAANQ
DSGLSMEAERPSTSSSLSGTAGSKRSREDEEEENRPESSHTPPTSKKLRLKPTMALQLEG
DEEIEGELRDEGERQDSPDDSQELPDDCFPVLAEDDEDMERVSQSVPSDMMSSQGSAIIR
DVIVIDTDSESRESKEGEEKQEDEEEDEEEEEEEEDEEEEEEEEGYKEEEDDDDEDDGDS
GMRGGEESNEESREAEEEGGEDEPSEAASAEENVCGASSDSQQRPSEPSHSNEGSSSATS
EAEPPREPVYFPPTSSSSLTPRLPHPRRPPHPLPPRLYIQPPAPELGPPHTQRQSSQLRR
PSVGRGPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRF
GPPEDLLPQTSASHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTV
FTESLPSDSGDNMASQSVPMVTTSTGMASAADDGDEVFMDQEGDGPGIESSLESQTDMES
TGQQSDYASLPSTSQDPDTSSAAQRRTVTSLMSSLSGRGTRGGRMEARTLLSRRGTFSRG
GRGGAMGRGGLA
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
tctctgccccatacagaacagcagtactttgacattgaaaagagactgtccgagagtcag
gaacagatcctgtcttccaccagagacctgcagacactcaaggaggaaaataaaaaactc
aatgaagagctgagcacactgaaggggatagagggagagacccttgaagataaaccacca
caacagcaaaccaaggccaagtatgagatcgaggcagagaagagagagctggcgcggctg
ctggagaagagaacgcaggaggcggagaacctctctgaggatgtgaagcgtctgaatgag
aagctgacagagaccagcaaagtgaagatggagctgcagctaaaactggatggtatacag
tcctctgaggcttctctacagcaccgagagaagcgtatggagcaggagaaagagttgcag
acaaagaagatcaagtggttaactgaacaactgaagaccaaaactgaagaactgctgaac
accaccagagagaaaggcaaagatattctgcagctacagggtggtctgaagaacggcaag
gagcaggtgaccagactggacagacagctgacctctctgaagcaaaccagtgagagccag
ggtagaagagccgaagacctcaacaacaaactgaaacagtctaaagacgagctcagtgcc
atggaggagaaataccgcaacgagctcaacgctcatgtcaagttgtcttccctctacaag
gtgagaacggctactatggagacaaaaaatcaagaactgagcagagccgtgcaagagctc
agcaagctggttaaagacagcggggaagccaataaggctctagaaaagaaggtgtcggag
ggagaagaactaaagacccggcttgaggcagagcttagagagaaggtcaagaaaatggag
aaagagctagaaaacgccacgatgaaggctgctggaaaacgatgctgtgtgccctctctg
actgacgagcagttggacgccatgtgtccatcagcagccgccatcgctgccatcgtcaag
cccggcatgaagttctttgatctgtataatgcgtatgcagagtgtcagacgcatcttcag
ctggagaagcaggagaccaggagagtgagcagagttctggatgagatcgttcaggaggtt
gagtccaaggctcctgtcctcaagcggcagagagaggagtacgagagcatgcagagatcc
atggcctccctgtgcaacaagctggaacaggctcgaacggagatctactctttgcagaaa
gagaaagaagaggctaagcagtgctgtgatgccatggagagagacaaactgaggacagag
agacagctggaggatacatcagcacaggtatgtactcttctggtggagctggaggaagcc
agaggtaataaggtgactaaggacgatggcagctccgccaacatctccagcacctctgag
gtcatcagtccacgccagctgtccttccgcagtgtggagcagctgcagaggcagaaccaa
agcctgctggggagggtgagggagctggaggaggaaaaggacagacagaagagccaagtg
acatcagcacgtgtgtcagagttggaggccagcgtggataagcttcagaaggaggtggag
cagctgagagagcagaggaaccagcagaaacagcttgccgaatccaacgccagacagaga
gacatgtacaaggccctgctgacacagagcaccggcttcagcctaccccctcaaggtctg
gattcttcatcccagcctgcacctgttaagccgtcagtcccagctactcgctctactcct
cagagagctgctgctgctgagtcagcacaaaccattcagactaaagctgctttaaaacag
ctgaatgacgccttcagtctgtataagaaggagaaggcagagaacgacaggatgttgaat
gaaacaaacgacagactgcagagacagctgacagatctccgctccagccacaccaagctc
acctctcaacttgagttcagcagcaagaggtacgagatgctccaggaaacggtatcagcc
taccgcagagagatctccgccctacaggataggaaccaaaagatgtctgctacggcccaa
cgacatgaacagatcatacacacaatgagccaggacctgagacaggctaacgaaaaactg
gcgctggaagaggtgcgcgtcgagaacttgactaaagagaaagacattttgagacaagca
gagagtcgactcaatcgagagaaggaagccgtgctggctgagcaacgtaaccagaacctg
ctgctcaccaacctcaagaccatacagttgaatatggagcgtacagagacagagactcgc
cagcggctgaacagcaagatggagaatctggaggcagaactggttttaatgaagaccagg
caggaccaggaagtagcgcaaagacatgcgcttgggcgcaccatggatgttcagttatta
gaagctaagaaacagctagagacccagaacaccttgcagcagaagaccagagagttgttg
cgtggcgctgaacagcaggtggcagcactgaaagcccagctggcttctgcttcatcctct
gaggctgtcaccacctccagcagcatgaccaccgcagctaccagagctgcaggcctccga
gcaccactgagagtacgctctccagtgccagcagcctcacagcagctcagccaatcggag
caggagattgcagaggtgaaaagtctcctgcgtactgccgaggaactaaacggtgaaata
gcagagcagctaaagaatgctaatgctactgtcgagcagtacagggctgtggtactgact
ctggaagacagcctgaagaaggaaaaggagtctcgctctcctttggagctccggctgaag
gagtccgaggaagtgcagaagcagctggagaaggcgattttagaggcggagaaaatgaag
cagcaggaaagagaagagagaagaaaggctgtggatgctgtggaaaaacaagtgtgtgaa
gtgcagcgcagtctgaagtccagccaggcagagcagcaggaggcgctggagagagctgcc
actgctgttacactggagcagaaggccgtacaggacagcctgctgcagactaagctagct
ggagaggcgcaggctaagtatgagcgagagctcatgcttcatgctgctgacgtggaggct
ctgcaggagctgaagaaaagatcccagcaaggtgtagcacagaatagggagctggaggag
caactgaacaagatctcgtccctcctgcaggagaaaactgtagctttgaacacagtggag
agacagctgaaggaggatctgtccactcagagtcgtcgctgtgtggagctggggaagcag
aatactctcctgcaccaacagatggatgaaatggccaccaagagcagtcggatgcagaaa
cagcagcagcagctgcttgacctgtcgttcactgaggaggggaagaccactgaacagata
ctagaaatactacggtttgtgcggcgtgagaaagagattgctgtggcttgtggtgaggcg
tctggtgaagaagctcttcgctacaaacagcgagtggaacaccaagacagagaactgaag
gagctgcaggaagcgctgaactctgagagggagaacatgcaggccacagcgaagactctg
gccctgcaggaggagcagctgaagaagatggagaccatcggcgctctccaagatgccaac
aggatgctgaaaatggagcgcgagagactggaacaagagctgctgcaagctcaggctaaa
gttaaaaagctacagtcagacatcagcccactacatcaatctttgtccctgctgtcagag
aaaaatggctccatgcaggcggataagaggatactggaggaagacctcaaacgctggaag
gccaaaacacagcaactggtcagccaacagaaagacggcgacgttgaggagagacagaaa
ctggccactgagagagaagctcagcagagacgcatcacacagctcgctgaagagacgggc
aagctgaagactgaactggccagatccagcgccagcagtaactccgctcagtctcagctg
caagccctcagagactctgtggcccgtctgacgtcggagagagacggtctgaagaaagac
ctggaaacaaaaaacagcgacattttggagaagaacaggaccatcacccaggtcaagaag
ataggacgacgctacaagacccagtatgaggagctcaaagcgctgcatgacaagctggtt
gtggatactgctgctaaagctggaagtgaggcaggtccgagccacgaggtgcagcaggat
ctgactaaagcccaggaggagctcaacacactgaaagaggagatgcagaaaaaagtggaa
gaggcccagaagtcccagcaggagctggaggaggccaagaaggaaaaccagcagaccaaa
gacaagctccaggaggtccaaaaccagctgacacagaaacagaaccagctgacacaggtc
cagtcccagttttcccagactcagactcaacagcagcagaatcagaaccagctgacccag
agtcagaaagagcttcagcaagccaagacccacagccagcaggtacagaaccagttaaaa
tcagctcagtctcaagctcaggcccggcagaaccagatccagcagatccagagggagctc
ctccaggctaaagaagccctccagcagaacctggctaatcagaaagagctacagcagacc
aaccaaagcagtcaacagagccacaaccaggaagtcagtaacatcaagactgctctcagc
caagccgagagcaaggtgactgagtttcagggccgcctggacagccagcagaagatggtt
ggtgagcgtgaagcagacatcaagcgtctgcaggagcagctaactgaagctaaccaggct
aatgaagctagccgagccacgcaggccaaccagaaccagagttcccagtccatccaggcc
ggtgattcaaacgttgctagtgacgctaaccaggcacaacaagaggagctgacaaaactc
agacaagagctgtctgagagcaagaacagagaggagcagctcaaaaagcagatttctgaa
aaagaggaaaagactaagaaggtcttcatgggagccaagaccaaaatcaaccaactaaac
ggtgctaaggagcagctcagtcaggagatagagcagatgaaacagagtaaggaggagctg
gaggtgagaatgaacgccctcaagtctcagtatgaaggacgatttcttcggctggacaga
gagctgagagaactgagagagacgcaatcacagtctgatgcccgagaggaaccacaggac
cagagtggagctaaggtgggggatcaggccagatctgcagaccagaggcagatctctttg
aaaagtcctgcccaagaccggggaagctccagcctgtctgaccctcccaccgctaacatc
cgtcccactacaagtactccatctcctagcaacaagccaagcccctcccctggtagcaag
gctacaccccgtgccagcgtccggccaatggttaccccggcaactgtccccatcccaaca
cctactgctactgtgatgccaaccacacagactgacagccaagaggtgctgatgacagca
ggagccgttgtacactctaccagctccagtctggtgaacacacccacatcaataactcag
ccaaccagcacccaggccacagcttttgtccagcccacccagcagcaggcagccaatcag
gactcaggcctcagtatggaggcagagcgaccatcaacatcctcctccctgagtggaaca
gcgggttcaaagcgaagcagagaggacgaggaagaggagaacagaccagagagttcacac
acacctccgacctctaaaaagctacgactaaaaccaacgatggcactgcagttggaaggg
gatgaagagattgaaggagagctgagggacgagggggaacggcaggattcaccagatgac
agtcaggagcttccagacgattgtttcccagttttagctgaagatgacgaggacatggag
agagtgtcccagtctgtcccctctgatatgatgtcctctcagggctccgctatcattcgg
gatgtcattgtgatcgacacggacagtgagagccgtgagagcaaagagggggaggagaag
caggaggacgaagaggaagatgaggaggaggaggaagaagaagaagatgaagaagaagaa
gaagaagaagaggggtataaggaggaagaggatgatgatgatgaagatgatggagacagc
gggatgaggggaggagaggagagtaatgaagagagcagggaggcagaggaggagggaggg
gaggatgagccgtcagaagctgccagcgctgaggagaatgtgtgtggagcgtcttcagac
tcgcagcagcgtccctctgagccgtcccacagcaatgaaggcagcagcagcgccacatca
gaggccgagccccccagagagcctgtatacttcccaccaacctcctcctcctccctcaca
ccccgcctgccccacccacgcaggcccccacacccgctcccaccacgactctacatccaa
cctccagctccggagctgggacccccacacacacagagacagtcctctcagctgcgcaga
ccatcagtaggacgcggacctcaactaacccctggaataggcagtatgcaacatttcttt
gatgatgacgacaggatggttcccagtactcccactctggtagtcccacaccgcactgat
ggctttgctgaggctatacattctcctcaggtagcaggtctgtccaccaggttcaggttt
ggacctccagaagacctgctgcctcagacatcagcctcacactctgacctgggacaactg
gcctctcaaggaggtctcgggatgtatgagtctcctctgttcctggctgctcatgatgaa
gacggaggaggaaggagcgtccccaccacacctttacaagtggctgcaccagtgaccgtc
ttcacagagtctctgccctcagacagtggtgacaacatggcatcccagtcggttcccatg
gtaaccacctccaccgggatggcttctgctgcagatgacggagatgaagtcttcatggac
caggaaggagacggtcctggtattgaatcttctttggagagccagacagacatggagtca
acaggacagcagagtgactatgcatcactgccatctaccagccaagacccggacaccagc
agtgctgctcagcggcgcacagtgaccagtctgatgagcagcctgtcaggcagaggaacc
agaggaggcaggatggaggcccggacgttactcagccgcagaggtactttctctcgagga
ggaaggggaggagccatgggcagagggggcttggcctaa
DBGET
integrated database retrieval system