Cottoperca gobio: 115022866
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Entry
115022866 CDS
T07513
Symbol
col6a2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115022866 (col6a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115022866 (col6a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115022866 (col6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115022866 (col6a2)
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115022866 (col6a2)
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115022866 (col6a2)
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115022866 (col6a2)
Hyaluronan
Extracellular matrix or blood plasma proteins
115022866 (col6a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
115022866
NCBI-ProteinID:
XP_029309832
UniProt:
A0A6J2RJZ7
LinkDB
All DBs
Position
17:18916962..18933576
Genome browser
AA seq
1012 aa
AA seq
DB search
MLGLEVIALCLLFGALTHGQPSECSKKNECPIDVYFTIDTSETIALQEPPPGALVESIKK
FAEQFAQRLEDAELKGSVRINWNIGGLHFSQRQEVFSRIGSKNDFITGVRGIRYLGKGTY
IDCALTNMTQEMLRTASSPNSLRFAVVITDGHVTGNPCGGIKVAAEKARDEGIRMFVVAA
TKNVEETGLREIANSPASVYRREFMAVDLSQGRAVIHMDTIDRIIATMKHLAFVECYKVT
CLETPGPPGPKGHRGQKGAKGDNGDPGLKGDIGRQGDPGIEGPIGQPGIKGEAGFLGDKG
EIGTQGKKGVGGISGRNGTDGQKGKIGRIGAPGCKGDPGDRGPDGHPGDVGERGFGGTDG
EKGDHGRPGRSGPSGPSGEGGPKGERGSPGSPGVPGLKGTPGNLGTGGPIGEPGRRGDYG
PKGGEGPDGVNGDKGEMGPEGLRGLPGESGNKGTKGDNGLPGPRGPPGTTGEAGKNGTRG
DPGDAGPRGESGLVGPKGDGGRPGFSYPGPRGSSGERGEGGNRGPRGSRGDCGQKGGPGK
KGTLGEGGEPGSQGEPGLRGTRGEFGRDGNPGPEGDPGLTECDVMNYIRETCGCCDCEKI
CGPLDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSMSKDPKSETGTRVGVVQYSHSGT
FQAIRLDDPKIDSLSAFKDAVKSLEWIAGGTWTPSALKYAYDNLIRDSRRAKANVNVVVI
TDGRFDPRDDDSLLTYLCSDPSIDVSAIGIGDMFDQIEENESLKSIACQKDGRVMGMRRF
ADLVAEEFINKIETVLCPNPIVKCPDLPCKSEPAVASCVQRPVDLVFMLDGSERMGLEDH
RKAKEFIENVARHLTLANGQTDERNARLALLQYGSHSEQRVEFALTHNLTVISDSLARVK
YMDSSSALGSAIIHAVNNLVVPKQGTRLSRRNAELAFVFITDGITASEQLEEGVSAMRRA
EGVPTVIAMGTDTDEEVLRKVSLGDMSAVFRGADYTMLNKPSFFERFIRWIC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgctggggttagaggtcatcgcgctctgtcttctttttggagccctcactcacggacag
ccatcagagtgcagcaagaagaatgaatgtcccatcgacgtgtacttcaccatagacacc
tctgagaccatcgccctgcaggagccaccccctggagcactggtggagagcatcaagaaa
tttgctgagcagtttgcacagcgtttggaagatgctgaactcaaaggctccgtgcggatc
aactggaacatcggcggactgcacttctcccagagacaggaagtgttcagtcgcatcgga
tccaagaatgatttcatcactggcgtgaggggaatccgttacctgggtaagggcacctac
atcgactgcgccctcaccaacatgacccaggaaatgctgcgcacagcctcatcccccaac
tccctccgattcgctgtggtcatcaccgacggccacgtgactggaaacccatgcgggggc
atcaaagtggcagcagagaaggctcgcgatgagggcatccggatgtttgtcgtggccgca
acgaaaaacgtagaagagacggggctgagggagatcgcaaactctcctgcgtccgtctac
aggagggaattcatggctgtggatctgagccagggaagagccgtcatacatatggacacc
attgaccgcatcatcgccaccatgaaacatttggcgtttgtagagtgttacaaagtgacc
tgtctggagacaccagggcctcccggtccaaaaggtcacagaggtcaaaaaggagctaaa
ggagacaacggcgacccaggtctgaaaggagatataggtcgccaaggagatcccggtatc
gagggtcccatcggtcagcctggtatcaaaggagaagcaggatttctaggcgacaaggga
gagatcggaactcagggaaaaaagggcgtgggtggcatctcaggacgcaatgggacagat
ggacagaagggtaaaattggacggatcggcgctcccggctgcaaaggagacccaggcgac
agaggtcccgatggtcaccccggagacgtcggtgaacgtggttttggtggaactgacgga
gaaaagggggatcacggtcgccctggaagatctggtccttctggcccgtctggagagggt
ggaccaaagggagagagaggaagtcctggatcacctggcgtccctggacttaaaggaacc
ccgggaaaccttggaactggaggacccattggagaaccagggagaagaggagactacggg
ccaaagggtggtgaagggccagatggagttaatggagacaagggtgaaatggggcccgag
ggcttgagaggacttccaggtgaatcaggaaacaaaggaacaaaaggagacaatggcctt
ccaggtcccaggggaccaccggggacaacgggagaggctgggaaaaatggcaccagaggt
gaccctggtgatgctggaccaagaggagaatctggactggttggaccaaagggagacggt
ggaagacctggcttcagctatcctgggccgagaggatcatcgggtgagagaggagagggg
ggcaatcgtggacctcgcggcagcagaggagactgcggtcaaaaaggtggaccaggaaag
aaagggactctgggagagggaggtgagccaggatctcagggtgaacctggcctaagaggg
acaagaggagagtttgggcgtgatggaaatcctggccctgagggagatcccggcctcact
gaatgtgatgttatgaactacatcagagaaacttgtggctgctgtgactgtgagaaaatc
tgcggacccctggacattgtgtttgtgatcgacagctcagagtcagtgggtctgactaac
ttcaccctggagaagaactttgtcatcaacaccatcaacagactgggatcaatgtccaaa
gaccccaaatcagaaacaggcacacgagtgggagttgttcagtacagtcacagtggaacc
ttccaggccatccggctcgacgaccccaagatcgattcactgtctgctttcaaggacgca
gtgaagagtttggagtggatcgctggaggaacatggactccatccgctctgaagtacgcc
tacgacaacctgatcagggacagccgcagagccaaagccaacgtgaacgttgttgtcatc
acagacggacgcttcgacccccgagatgacgactcgctgctcacctacctctgcagtgat
cccagcattgatgtgagcgccatcggtatcggagacatgttcgatcagattgaggagaat
gagagtctgaagagcatcgcctgccagaaggatggcagggtgatgggcatgaggcgcttt
gcagacctggtggcagaggagttcatcaacaaaattgaaaccgtgctctgcccaaatcct
atcgtcaaatgccctgacctcccctgcaaatcagagccagcagtggctagctgtgttcag
cggccagtggatctggtgttcatgttggatggttctgagaggatgggactggaggatcac
cgcaaagccaaagagttcatcgagaacgtggctcgccatctcaccctggccaacggccag
acagatgagaggaatgcccgcttggctctgctgcagtacggcagccattcagaacagcgg
gtggagttcgcgctcacacacaatctcacagtgatctctgattcgctggcaagagtgaag
tacatggactcctcttctgcgctgggcagcgctatcatccatgctgtcaataatctggtg
gttccaaagcagggaacccgtttgtcccgtcgcaacgctgagctggcctttgtgttcatc
actgatggcatcacagccagcgagcagctggaggagggcgtgtctgccatgaggcgagct
gaaggcgttcccacggtgatcgcgatgggaacagacacagatgaagaggtgctgcggaag
gtgtcactaggggacatgtcggctgtcttcagaggagctgactacaccatgctgaacaaa
ccatcattctttgagcgctttatccgctggatatgctag
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