KEGG   Cottoperca gobio: 115023039
Entry
115023039         CDS       T07513                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob04382  Cornified envelope formation
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04518  Integrin signaling
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115023039
   04518 Integrin signaling
    115023039
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115023039
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115023039
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115023039
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgob04147]
    115023039
   00536 Glycosaminoglycan binding proteins [BR:cgob00536]
    115023039
Exosome [BR:cgob04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   115023039
Glycosaminoglycan binding proteins [BR:cgob00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   115023039
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 115023039
NCBI-ProteinID: XP_029310039
UniProt: A0A6J2RJ78
LinkDB
Position
17
AA seq 1561 aa
MMAHQATLEQVVSLVCQEQMAVMGQGDDQESLVFLVWMVSMGLLGLAGPKGIKGEPLYGA
ALPGIPGERGGDGQHGLPGRQGDIGPKGHTGPPGPLGYEGSEGRRGVRGQPGDPGGSLAG
AKGDNGEQGSPGPQGPEEVMNFPPDFLPVKGYKGEQGLPGPCGSKGLSGGREDYNIQGIK
GEQGILGFPGMRGLPGFPGRDGLPGPEGFHGEKGFPGLIGINGPKGYPGDPGPSGPLHFH
NGSNARGVKGDRGYPGNPGTPGDAGYMGMHGPTGPPGSTLPEEPGLPGQPGSLGPKGYKG
EQGRYKNFENLFPGSKGTKGFLGPKGVTGPPGPPGCGDYYCEPGYPGDPGSAGPKGSHGN
KGPKGIKGCEGECNCRSGGGSKGLPGPTGDPGFPGLPGTLGFRGDPGLKGYEGSRGQVGF
QGIPGLKGHKGQKGHTFVVDTKGAKGNQGFPGHSGPPGATGSSGQDALPGPAGDRGTPGA
GYEGLPGPKGDPGVAGPKGFPGDIGPPGPGFQGTKGLPGPKGHQGRSGTSGIPGRSGPPG
EIETCCHEEEIGSHGPKGEPGSPGIPGTLGRDGPLGTPGHPGPKGMNGDDIVAGGIGLIG
SPGLNGCQGDPGPSGISLDGPSGPPGLLGRPGRKGDPGDVLSARPGATGTPGRLGAVGTN
GHRGIPGNPGSPGAQGQPGQPGWKGEPGLNGDPGATGPQGPPCTECELKESPGPPGNPGR
GGIPGYIGQKGLKGDIGPPGHGLRGPEGFPGPPGLPGLAGTRGPTGPSGDPGTDGWSGQK
GESGYPGMAKSLPGHPGPAGPRGKQGETGFNGHPGEPGYQGQPGNKGVRGSPGIPGPSWI
VNMTKGPPGPSGRKGQKGEQGPAGSKTQRGVPGDSGPDGRPGSQGFKGSTGAPGRAGRPG
SPGYSGIKGFPGPRGYHGQGGDLGDQGPWGQTGIPGLPGFPGAKGESGQSYGQPGPSGPK
GMRGDDGYSAPRGIPGDPGDPGPRGRSGQLGQTGIVGEPGRQGVPGFPGPLGLTGRPGLP
GLPGDHGGLGPPGPPGPYGPPGSPGTPGLDGLDGLRGPNGMKGESGIGIHGPPGPDGFPG
VKGLRGQQGAPGATFPGPKGERGPPGITGLPGFLGGPGNPGKECLKRPPGTYGDIGYEGP
PGPAGSRGEPGPPGSSIYSKGDPGPNGLPGFPGRKGDGSLPGPPGSQGYPGFTGPKGERG
PAGPGGPPGPKGQFGVPGPWGRKGLTGPTGNAGTKGPPGDVIRQDQVGPPPVPQGSRGFP
GSVGFPGDAGPPGTPGRKGQKGPIGYVGLPGTPGPVGRDGPIGDAGDVGQLGFTGPQGIP
GPPGNPGQLGHPGVLSSGFLLVIHSQSVQVPQCPEGSSPLWVGYSLVYLEGQERAHTQDL
GQAGSCLPVFSTMPFSYCNKAACHYSSRNDKSYWLSTTAPIPMMPLFGQEISSHISRCVV
CETVSPAVAVHSQDHNVPACPPGWSSLWTGYSFLLHTGAGDEGGGQSLTSSGSCLKDFRT
NPFIECQGARGSCHYFANLYSFWLTTVSQAEQFITQRPGTIKAADQQRRKASQCHVCLRA
Q
NT seq 4686 nt   +upstreamnt  +downstreamnt
atgatggctcatcaggccaccctggagcaggtggtgagcctggtttgccaggagcagatg
gctgtaatgggacaaggggacgatcaggagtctttggtattcctggtttggatggtctcc
atgggcctgctgggattagctggacctaaagggattaaaggagaacccttgtatggtgct
gcccttccagggattccgggggagcgtggtggagatggacaacatggtctacctggaaga
caaggagacattgggcctaaagggcacactggccctcctggccctcttggatatgagggc
tcggaaggacgtagaggtgtgagaggacaaccaggcgaccccggaggatcactggcagga
gctaaaggtgacaatggtgagcaaggctcgcctggcccacaaggaccagaagaagtcatg
aactttcctccagactttcttccggttaaaggttacaagggagaacaaggtcttcctgga
ccatgtggatcaaagggcttaagcggtggtagagaagactacaacattcaaggaattaaa
ggagagcaaggaatcctcggttttcctggaatgaggggtcttccaggatttcctggtaga
gatggactgccaggacctgagggtttccacggagagaaaggatttccaggtctcattgga
ataaatggaccaaagggttacccaggagatccaggtccatccggtcctctgcactttcac
aatggaagtaatgcaagaggtgttaaaggtgatcgtgggtatcctggaaatcctggaacc
ccaggtgacgctgggtacatgggcatgcatggacctactggtccaccagggtcaacctta
ccagaagagcccggtctgccaggtcaaccagggtcccttggccccaagggctacaaggga
gagcaaggaaggtataagaactttgaaaatctgtttccgggatcaaagggaactaaagga
ttcctcggacctaaaggtgtcacaggccccccgggtcctccaggatgtggagattactac
tgtgagcctggttacccaggggaccctggcagtgcaggacctaaaggatctcatggaaac
aaagggcccaaaggaattaaaggttgtgaaggggaatgtaactgtaggtctggtggggga
agcaaagggcttcccggtccaactggtgatccaggatttccagggttacctggaactcta
ggatttagaggagacccggggctgaaaggatatgagggttcaagaggacaagtaggcttt
caaggaattcctggtttaaaaggacacaagggtcaaaaaggtcacacttttgtggtagat
accaaaggtgccaagggaaaccaaggatttcctggacattctggtcctcctggagcaaca
ggtagttcaggacaggatgccctccctggtcctgcaggggaccgtggaacaccgggtgct
ggatatgaaggattacctggtcccaaaggtgaccctggtgttgcaggacccaaagggttt
ccaggggatataggccccccaggtcctggttttcaaggcaccaaggggctacctggacct
aaaggtcatcaaggacgttctggcacctcaggaattcctggacgatcaggccccccaggt
gaaattgagacatgctgtcatgaagaagagattggatcacatggtcctaagggtgagcca
ggttcaccggggattccaggtacgctaggaagagatggtcctctgggaactccgggacac
ccaggcccaaaaggcatgaacggagatgacattgtagctggagggattggactgatcgga
tctccaggtttaaatgggtgtcaaggtgaccccggtcccagtggaattagcctggacggc
ccttcaggccctcctgggttactgggacgtccaggcagaaagggtgacccaggagatgtt
ctgtctgctcggccaggtgctactggcacacctggccgccttggggctgtggggacaaac
ggacaccgtggcattcctggaaacccagggtctccaggcgcacaaggccaacctggacaa
cctggatggaaaggagagccaggactcaatggtgaccctggagccactggtccccaaggc
ccaccctgcactgaatgtgaactgaaagaatctccaggccctccaggaaaccctggacgc
gggggaataccaggctacattggtcagaagggtttaaagggagatataggtccacctggt
catggactaaggggtccagaaggtttccctggccctcccggtttgccaggcctggctgga
acaagaggccccactggcccctcgggagatcctgggactgatggctggtcaggacagaaa
ggtgaaagtggttacccaggcatggccaaaagtttaccaggtcatcctggacctgcggga
ccccgaggtaaacagggagagacaggctttaatggtcacccaggtgaacctggataccaa
ggacagcctggtaataaaggtgtgcgtggatcacccggaataccaggaccatcttggatt
gtgaatatgacaaagggcccaccaggaccttcaggaaggaaggggcaaaaaggagaacaa
ggacctgcaggctcaaagacccaaaggggagtgccaggtgattcggggcctgatggacgg
cctggttcgcaagggtttaaaggcagcactggtgctccaggcagggcaggaagaccaggt
tctcctgggtactctggaatcaaaggtttccctggtccaaggggatatcatggacagggt
ggagatctgggagatcaagggccttggggacaaacgggtatcccagggttaccaggattt
ccaggagccaagggtgagtcaggacaatcttatggacaacctggtccatctggacccaaa
ggaatgcgaggggacgatggatacagtgcacccagagggattccaggagatccaggggac
ccaggaccccggggaaggtcaggacaacttggacaaacaggcattgtcggggaaccagga
agacaaggagtaccaggcttccctgggcctcttggcttaacaggtcgtccaggtcttcca
ggtcttccaggcgatcatggaggtctgggaccaccaggcccacctggcccatatgggcct
ccagggtcccctggaacaccaggcctggatggactggatgggcttagaggtccaaacggg
atgaaaggagaaagtggcataggtatccatggccctcctggaccagatggttttcctgga
gtcaaaggcctcaggggccagcaaggggctccaggagccacttttcctgggcctaaaggc
gagaggggcccacctggcatcacaggtcttccaggcttcctcggtggacctggtaaccct
ggcaaagaatgcttaaagcgtccgccaggaacctacggggacataggatatgaagggcct
ccaggaccggcaggctctcgtggggagccgggccctccaggcagcagcatttactccaaa
ggagatccaggtccaaatggcctccctgggtttccaggtcgtaagggagatgggagcctc
ccagggcctcctgggtctcagggctacccaggctttacaggaccaaaaggtgagagaggt
cctgctggtcctggaggtcctccaggacccaaaggtcagtttggggtccctgggccttgg
ggccgcaagggattaactggcccaactggaaatgcaggtaccaaaggtccacctggtgat
gtcatcagacaagaccaagtggggcctccccctgtaccccaaggatcacgtggtttccca
ggatctgtgggattccctggcgatgcgggtcctcctgggactccaggacgtaaaggacaa
aagggtcccattgggtatgtcggcctccctggcacaccaggtcctgttggtcgtgatggt
cctattggagacgcaggagatgttggtcagctaggatttaccggacctcaaggtatccca
ggtccacccggtaatccaggtcagctaggccatccaggggtgttgagctcaggcttcctt
ttggttatccacagccagtcagttcaggtgccacagtgccctgaaggcagcagtcctctt
tgggtgggctacagtctggtctacttggagggacaagagagggctcacactcaagatctg
ggccaggctggctcctgcctccctgttttctccaccatgccgttctcctactgcaacaag
gctgcctgtcactactctagtcgcaacgacaaatcctattggctctccaccaccgctccc
atacccatgatgccactctttggccaggagattagctcccacatcagccgctgtgtggtc
tgtgagacagtttcgcctgcagtggctgttcacagtcaggatcacaatgtccctgcctgc
ccacctggctggagtagtctgtggaccgggtactctttcctcctgcacacaggggcaggt
gatgagggtggtggccagtctctgacttcttctggtagctgccttaaggatttccgaaca
aatcccttcatagagtgccagggtgcgcgcgggtcctgtcactactttgccaacctctac
agtttttggctgactactgttagtcaagcagaacagtttattactcagaggcctggcacc
atcaaggcagctgaccaacagcgacgcaaagccagtcaatgtcatgtctgcctcagagca
cagtaa

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