Cottoperca gobio: 115023039
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Entry
115023039 CDS
T07513
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04382
Cornified envelope formation
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04518
Integrin signaling
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115023039
04518 Integrin signaling
115023039
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115023039
09142 Cell motility
04820 Cytoskeleton in muscle cells
115023039
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115023039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115023039
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115023039
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115023039
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115023039
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115023039
NCBI-ProteinID:
XP_029310039
UniProt:
A0A6J2RJ78
LinkDB
All DBs
Position
17
Genome browser
AA seq
1561 aa
AA seq
DB search
MMAHQATLEQVVSLVCQEQMAVMGQGDDQESLVFLVWMVSMGLLGLAGPKGIKGEPLYGA
ALPGIPGERGGDGQHGLPGRQGDIGPKGHTGPPGPLGYEGSEGRRGVRGQPGDPGGSLAG
AKGDNGEQGSPGPQGPEEVMNFPPDFLPVKGYKGEQGLPGPCGSKGLSGGREDYNIQGIK
GEQGILGFPGMRGLPGFPGRDGLPGPEGFHGEKGFPGLIGINGPKGYPGDPGPSGPLHFH
NGSNARGVKGDRGYPGNPGTPGDAGYMGMHGPTGPPGSTLPEEPGLPGQPGSLGPKGYKG
EQGRYKNFENLFPGSKGTKGFLGPKGVTGPPGPPGCGDYYCEPGYPGDPGSAGPKGSHGN
KGPKGIKGCEGECNCRSGGGSKGLPGPTGDPGFPGLPGTLGFRGDPGLKGYEGSRGQVGF
QGIPGLKGHKGQKGHTFVVDTKGAKGNQGFPGHSGPPGATGSSGQDALPGPAGDRGTPGA
GYEGLPGPKGDPGVAGPKGFPGDIGPPGPGFQGTKGLPGPKGHQGRSGTSGIPGRSGPPG
EIETCCHEEEIGSHGPKGEPGSPGIPGTLGRDGPLGTPGHPGPKGMNGDDIVAGGIGLIG
SPGLNGCQGDPGPSGISLDGPSGPPGLLGRPGRKGDPGDVLSARPGATGTPGRLGAVGTN
GHRGIPGNPGSPGAQGQPGQPGWKGEPGLNGDPGATGPQGPPCTECELKESPGPPGNPGR
GGIPGYIGQKGLKGDIGPPGHGLRGPEGFPGPPGLPGLAGTRGPTGPSGDPGTDGWSGQK
GESGYPGMAKSLPGHPGPAGPRGKQGETGFNGHPGEPGYQGQPGNKGVRGSPGIPGPSWI
VNMTKGPPGPSGRKGQKGEQGPAGSKTQRGVPGDSGPDGRPGSQGFKGSTGAPGRAGRPG
SPGYSGIKGFPGPRGYHGQGGDLGDQGPWGQTGIPGLPGFPGAKGESGQSYGQPGPSGPK
GMRGDDGYSAPRGIPGDPGDPGPRGRSGQLGQTGIVGEPGRQGVPGFPGPLGLTGRPGLP
GLPGDHGGLGPPGPPGPYGPPGSPGTPGLDGLDGLRGPNGMKGESGIGIHGPPGPDGFPG
VKGLRGQQGAPGATFPGPKGERGPPGITGLPGFLGGPGNPGKECLKRPPGTYGDIGYEGP
PGPAGSRGEPGPPGSSIYSKGDPGPNGLPGFPGRKGDGSLPGPPGSQGYPGFTGPKGERG
PAGPGGPPGPKGQFGVPGPWGRKGLTGPTGNAGTKGPPGDVIRQDQVGPPPVPQGSRGFP
GSVGFPGDAGPPGTPGRKGQKGPIGYVGLPGTPGPVGRDGPIGDAGDVGQLGFTGPQGIP
GPPGNPGQLGHPGVLSSGFLLVIHSQSVQVPQCPEGSSPLWVGYSLVYLEGQERAHTQDL
GQAGSCLPVFSTMPFSYCNKAACHYSSRNDKSYWLSTTAPIPMMPLFGQEISSHISRCVV
CETVSPAVAVHSQDHNVPACPPGWSSLWTGYSFLLHTGAGDEGGGQSLTSSGSCLKDFRT
NPFIECQGARGSCHYFANLYSFWLTTVSQAEQFITQRPGTIKAADQQRRKASQCHVCLRA
Q
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcatcaggccaccctggagcaggtggtgagcctggtttgccaggagcagatg
gctgtaatgggacaaggggacgatcaggagtctttggtattcctggtttggatggtctcc
atgggcctgctgggattagctggacctaaagggattaaaggagaacccttgtatggtgct
gcccttccagggattccgggggagcgtggtggagatggacaacatggtctacctggaaga
caaggagacattgggcctaaagggcacactggccctcctggccctcttggatatgagggc
tcggaaggacgtagaggtgtgagaggacaaccaggcgaccccggaggatcactggcagga
gctaaaggtgacaatggtgagcaaggctcgcctggcccacaaggaccagaagaagtcatg
aactttcctccagactttcttccggttaaaggttacaagggagaacaaggtcttcctgga
ccatgtggatcaaagggcttaagcggtggtagagaagactacaacattcaaggaattaaa
ggagagcaaggaatcctcggttttcctggaatgaggggtcttccaggatttcctggtaga
gatggactgccaggacctgagggtttccacggagagaaaggatttccaggtctcattgga
ataaatggaccaaagggttacccaggagatccaggtccatccggtcctctgcactttcac
aatggaagtaatgcaagaggtgttaaaggtgatcgtgggtatcctggaaatcctggaacc
ccaggtgacgctgggtacatgggcatgcatggacctactggtccaccagggtcaacctta
ccagaagagcccggtctgccaggtcaaccagggtcccttggccccaagggctacaaggga
gagcaaggaaggtataagaactttgaaaatctgtttccgggatcaaagggaactaaagga
ttcctcggacctaaaggtgtcacaggccccccgggtcctccaggatgtggagattactac
tgtgagcctggttacccaggggaccctggcagtgcaggacctaaaggatctcatggaaac
aaagggcccaaaggaattaaaggttgtgaaggggaatgtaactgtaggtctggtggggga
agcaaagggcttcccggtccaactggtgatccaggatttccagggttacctggaactcta
ggatttagaggagacccggggctgaaaggatatgagggttcaagaggacaagtaggcttt
caaggaattcctggtttaaaaggacacaagggtcaaaaaggtcacacttttgtggtagat
accaaaggtgccaagggaaaccaaggatttcctggacattctggtcctcctggagcaaca
ggtagttcaggacaggatgccctccctggtcctgcaggggaccgtggaacaccgggtgct
ggatatgaaggattacctggtcccaaaggtgaccctggtgttgcaggacccaaagggttt
ccaggggatataggccccccaggtcctggttttcaaggcaccaaggggctacctggacct
aaaggtcatcaaggacgttctggcacctcaggaattcctggacgatcaggccccccaggt
gaaattgagacatgctgtcatgaagaagagattggatcacatggtcctaagggtgagcca
ggttcaccggggattccaggtacgctaggaagagatggtcctctgggaactccgggacac
ccaggcccaaaaggcatgaacggagatgacattgtagctggagggattggactgatcgga
tctccaggtttaaatgggtgtcaaggtgaccccggtcccagtggaattagcctggacggc
ccttcaggccctcctgggttactgggacgtccaggcagaaagggtgacccaggagatgtt
ctgtctgctcggccaggtgctactggcacacctggccgccttggggctgtggggacaaac
ggacaccgtggcattcctggaaacccagggtctccaggcgcacaaggccaacctggacaa
cctggatggaaaggagagccaggactcaatggtgaccctggagccactggtccccaaggc
ccaccctgcactgaatgtgaactgaaagaatctccaggccctccaggaaaccctggacgc
gggggaataccaggctacattggtcagaagggtttaaagggagatataggtccacctggt
catggactaaggggtccagaaggtttccctggccctcccggtttgccaggcctggctgga
acaagaggccccactggcccctcgggagatcctgggactgatggctggtcaggacagaaa
ggtgaaagtggttacccaggcatggccaaaagtttaccaggtcatcctggacctgcggga
ccccgaggtaaacagggagagacaggctttaatggtcacccaggtgaacctggataccaa
ggacagcctggtaataaaggtgtgcgtggatcacccggaataccaggaccatcttggatt
gtgaatatgacaaagggcccaccaggaccttcaggaaggaaggggcaaaaaggagaacaa
ggacctgcaggctcaaagacccaaaggggagtgccaggtgattcggggcctgatggacgg
cctggttcgcaagggtttaaaggcagcactggtgctccaggcagggcaggaagaccaggt
tctcctgggtactctggaatcaaaggtttccctggtccaaggggatatcatggacagggt
ggagatctgggagatcaagggccttggggacaaacgggtatcccagggttaccaggattt
ccaggagccaagggtgagtcaggacaatcttatggacaacctggtccatctggacccaaa
ggaatgcgaggggacgatggatacagtgcacccagagggattccaggagatccaggggac
ccaggaccccggggaaggtcaggacaacttggacaaacaggcattgtcggggaaccagga
agacaaggagtaccaggcttccctgggcctcttggcttaacaggtcgtccaggtcttcca
ggtcttccaggcgatcatggaggtctgggaccaccaggcccacctggcccatatgggcct
ccagggtcccctggaacaccaggcctggatggactggatgggcttagaggtccaaacggg
atgaaaggagaaagtggcataggtatccatggccctcctggaccagatggttttcctgga
gtcaaaggcctcaggggccagcaaggggctccaggagccacttttcctgggcctaaaggc
gagaggggcccacctggcatcacaggtcttccaggcttcctcggtggacctggtaaccct
ggcaaagaatgcttaaagcgtccgccaggaacctacggggacataggatatgaagggcct
ccaggaccggcaggctctcgtggggagccgggccctccaggcagcagcatttactccaaa
ggagatccaggtccaaatggcctccctgggtttccaggtcgtaagggagatgggagcctc
ccagggcctcctgggtctcagggctacccaggctttacaggaccaaaaggtgagagaggt
cctgctggtcctggaggtcctccaggacccaaaggtcagtttggggtccctgggccttgg
ggccgcaagggattaactggcccaactggaaatgcaggtaccaaaggtccacctggtgat
gtcatcagacaagaccaagtggggcctccccctgtaccccaaggatcacgtggtttccca
ggatctgtgggattccctggcgatgcgggtcctcctgggactccaggacgtaaaggacaa
aagggtcccattgggtatgtcggcctccctggcacaccaggtcctgttggtcgtgatggt
cctattggagacgcaggagatgttggtcagctaggatttaccggacctcaaggtatccca
ggtccacccggtaatccaggtcagctaggccatccaggggtgttgagctcaggcttcctt
ttggttatccacagccagtcagttcaggtgccacagtgccctgaaggcagcagtcctctt
tgggtgggctacagtctggtctacttggagggacaagagagggctcacactcaagatctg
ggccaggctggctcctgcctccctgttttctccaccatgccgttctcctactgcaacaag
gctgcctgtcactactctagtcgcaacgacaaatcctattggctctccaccaccgctccc
atacccatgatgccactctttggccaggagattagctcccacatcagccgctgtgtggtc
tgtgagacagtttcgcctgcagtggctgttcacagtcaggatcacaatgtccctgcctgc
ccacctggctggagtagtctgtggaccgggtactctttcctcctgcacacaggggcaggt
gatgagggtggtggccagtctctgacttcttctggtagctgccttaaggatttccgaaca
aatcccttcatagagtgccagggtgcgcgcgggtcctgtcactactttgccaacctctac
agtttttggctgactactgttagtcaagcagaacagtttattactcagaggcctggcacc
atcaaggcagctgaccaacagcgacgcaaagccagtcaatgtcatgtctgcctcagagca
cagtaa
DBGET
integrated database retrieval system