Cottoperca gobio: 115023105
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Entry
115023105 CDS
T07513
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115023105 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115023105 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115023105 (tnn)
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115023105 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Ig_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
Motif
Other DBs
NCBI-GeneID:
115023105
NCBI-ProteinID:
XP_029310119
Ensembl:
ENSCGOG00000017317
UniProt:
A0A6J2RJG3
LinkDB
All DBs
Position
17:complement(11947108..11989664)
Genome browser
AA seq
1122 aa
AA seq
DB search
MSMTTRLLWRALCLLVLLCIVSHFSSATNPPDPPAPEQGVTFSHVYKIDIPGSSSCKLES
LPTEDKTGLQTETTTNGKNDIIFRHNIRLNTPKCECEESESFKSLLYRVNGLEEEVNYLK
TQCTQGCCGSGGAIGVDTSCSGHGTYQPDTCSCFCNPGWEGPDCSVSSCPDECNDNGRCV
DGKCVCHQGYTGEDCSQLMCPDNCNDKGQCVDGKCVCFPHFTGEDCSVQKCPNDCIGNGQ
CVDGQCICEEGFYGEDCSLVLGPQGLRLVQVTDISLLVEWESVRGAEYYILTYHPKDDKS
SLEQVRVPNTENSYLITGLSPGVTYIVQVHAVIKEIQSEADKIEAATDVSTIDGIRVLGQ
TEVSIKVDWKNPPAEVDHFRLTHTGPAGQEEELNVKRSQEARTKHTIVGLFPGTEYKISV
QAIKGTSEGKPSSVTGATDIDAPTNLITTEVTEDTATVSWERVQAEIEGYMLSYTSAEGS
STDISVGRDSTSYRLVGLKPGVLHTVYIWAYKGDKVSKKSSTEAETELDTPTNVLAQDET
ESSFRVSWDHTQANIDGYILTYSSSEGSSEEISVGSDISSYMLNGLRPGVLYTVYVWAIK
EGKASRKISTQAETDLDAPANLSARDVTESSFSVSWGPAQAEIDGYALTYSSSEGSTDVI
PVGSDSTSHSLTGLRPGVLYTVYIWAIKGNKASKKTSTQAQTELDAPANLLARDESESSF
SVSWDPVQAEIDGYILTYSSSEGSSKEIPVGSDSTSYSLTGLRPGVLYTVYIWAIKGSKA
SRKISTKAETDIDAPEDLKATDVTLDSAFLTWIAPLADIEGYILTYRDEDGNMETVEKQL
GASESSFAVSSLETGKRYIVTIIAYRGNKSSKVLQTTFRTVGLLYPFPMDCVQIMKNGNK
KSAIYTVYINNNRSKPIEAYCDMETDGGGWLVLQRRTTGKLDFMKRWRQYIAGFGNMTEE
FWIGLDKIYELTNTPTQYEVRFDVGLGAERAYAVYDDFKIAPVKEKFKLTIGKYSGTAGD
AMTYHQGRPWTTVDNDNDIALGNCALTHRGAWWYKNCHLANLNGKWGDIRHSLGVNWEPW
KGHLVSLDFTEMKIRPVGALSSRKRRSLVAREKSRTTNLQKK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgactaccagactcctgtggagggccctgtgcctgctggtcctactctgcatc
gtgtcacacttcagctccgccactaaccccccagaccccccagccccagagcagggagtc
accttcagccacgtctataaaattgacatcccagggagctccagttgtaaacttgagagc
ctgccaactgaggacaaaacaggtctgcagacagagaccactacaaatggaaaaaatgac
atcatcttcagacacaacatcaggctgaatacaccaaagtgtgaatgtgaagagtctgaa
agcttcaagtcactcttgtacagagtcaacgggctggaggaagaagtcaactacctaaag
acccaatgtactcagggatgttgtggaagcggtggggctataggagtggacacaagctgt
agtgggcatggtacctaccaacccgacacctgcagctgcttctgtaacccaggatgggaa
ggcccagattgctcagtgtcctcctgccctgacgagtgcaatgacaacggccgatgtgtg
gatggaaagtgtgtgtgccatcagggctacacaggagaggactgtagccagctgatgtgt
ccagacaactgcaacgacaagggacaatgcgtggatggaaaatgcgtgtgtttcccgcac
tttaccggcgaggattgcagcgtccagaagtgtcccaatgactgcattggtaacggccag
tgtgtggatggccagtgcatctgtgaggaaggcttttatggcgaagactgttcattagtc
ctcggccctcagggtctgcggctggtccaggtgacagacatctctctcctggttgagtgg
gaatcagttcgtggggcagagtattacattctgacatatcatcccaaagacgataagagt
tcactggagcaagttcgggttccaaacacagagaactcctacctcatcacaggactgagt
cctggggtcacctacattgtccaggtgcatgccgtcatcaaagaaatccaaagtgaagca
gacaagattgaggccgccacagatgtctccactattgatggtatcagagttcttggccag
acagaagtctctatcaaggtggactggaagaacccaccagctgaggtggatcacttcagg
ctcacacacactggcccggcaggacaggaggaggagctgaacgtaaagaggagtcaggag
gcgcgcaccaaacacactattgtcggtttgtttccaggaacagagtacaagatctcagtg
caggcgatcaaaggaacctctgagggaaaaccttcctctgtcactggtgccacagacatt
gatgctcctaccaacctgatcaccactgaagtaacagaggacactgcaaccgtttcatgg
gagcgtgtccaggcagaaatagagggctacatgttgagctacacctctgctgagggctcc
agcaccgacatctccgtaggacgtgacagcacgtcgtacaggctggttggcctgaagccc
ggagttctccacactgtctacatctgggcttataagggagacaaagtcagcaagaagagt
tccacagaagctgaaacagagctggacactcctactaatgtcttggcccaagatgaaaca
gagtccagcttcagagtctcctgggatcatacccaggccaacattgatggctacatccta
acctacagctcctctgaggggtcaagtgaggaaatctctgtcgggtctgatatttcttcc
tacatgctgaatggcctgaggcctggtgtcctctacactgtctacgtatgggccatcaag
gaaggcaaggccagcaggaagatctcaacacaagcggagacagacctggatgctcccgct
aacctctcagcccgagatgtgacagagtccagcttcagcgtgtcatggggtccggcccag
gcagaaatagatggctacgccctaacctacagctcctctgagggctctactgatgtgatc
ccagtgggctctgacagcacctctcacagcctgactggcctgaggcctggtgtcctctac
actgtctacatctgggccataaaaggaaacaaagccagcaaaaaaacctcaacacaagct
cagacagaactggacgctcctgctaacctcttagcccgagatgaatcagagtccagcttc
agcgtgtcatgggatccagtccaggcagaaattgatggctacatcctaacctacagctcc
tctgagggctctagtaaggaaatcccagttgggtctgacagcacctcttacagcctgact
ggcctgaggcctggtgtcctctacactgtctacatctgggccatcaaggggagcaaagcc
agcaggaagatctcaacaaaagctgagacagacatcgatgcccctgaggacttgaaggca
acagatgtgacactggattctgcttttttgacctggattgctcctctcgctgacattgag
gggtacatcctcacatacagagatgaggacggcaacatggagacggttgaaaagcagctc
ggggccagcgagagcagttttgctgtatccagtttggagacagggaagagatacatcgtc
accatcatcgcctacagggggaacaagagcagcaaggtgctacagacgaccttcagaaca
gttggcctcctgtaccccttccccatggactgcgtccagatcatgaagaatggcaataag
aagagtgccatctacaccgtctacattaacaacaaccgctccaaaccaattgaggcttac
tgcgacatggagactgatggaggcggctggctggtgctccagcgacgtaccactggcaag
ctggacttcatgaaacgctggagacagtacatagccggctttggcaacatgacagaggag
ttctggattggtctggataagatatatgagctcaccaacactccgactcaatatgaggtg
aggtttgacgtgggactgggcgccgagagagcctacgctgtatacgacgactttaagatc
gcaccggtcaaggagaaattcaaactcactatcggcaaatacagtgggacagcaggtgat
gctatgacctaccaccaaggccggccctggaccactgttgataatgacaatgacatcgcc
ctgggtaactgtgccctgacccaccgtggcgcatggtggtacaaaaactgtcatctggcc
aacctcaatggaaaatggggagacatcaggcacagtttgggagttaactgggaaccgtgg
aagggccacctggtgtccctggacttcaccgagatgaagatccgacctgtgggagccttg
tccagcaggaagaggcgatcgttggtggccagagagaagagcagaaccacaaacctccaa
aagaaataa
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integrated database retrieval system