Cottoperca gobio: 115023127
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Entry
115023127 CDS
T07513
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03271
Virion - Rotavirus
cgob04145
Phagosome
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04514
Cell adhesion molecules
cgob04530
Tight junction
cgob04810
Regulation of actin cytoskeleton
cgob04820
Cytoskeleton in muscle cells
cgob05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
115023127
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115023127
04514 Cell adhesion molecules
115023127
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115023127
09144 Cellular community - eukaryotes
04510 Focal adhesion
115023127
04530 Tight junction
115023127
09142 Cell motility
04820 Cytoskeleton in muscle cells
115023127
04810 Regulation of actin cytoskeleton
115023127
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115023127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115023127
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115023127
04515 Cell adhesion molecules [BR:
cgob04515
]
115023127
04090 CD molecules [BR:
cgob04090
]
115023127
Membrane trafficking [BR:
cgob04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115023127
Exosome [BR:
cgob04147
]
Exosomal proteins
Proteins found in most exosomes
115023127
Cell adhesion molecules [BR:
cgob04515
]
Integrins
Integrin beta subunits
115023127
CD molecules [BR:
cgob04090
]
Proteins
115023127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
115023127
NCBI-ProteinID:
XP_029310147
Ensembl:
ENSCGOG00000015317
UniProt:
A0A6J2RGZ5
LinkDB
All DBs
Position
17:3277461..3294395
Genome browser
AA seq
754 aa
AA seq
DB search
MDLRLLLIATLSAVLCGSWAQQEGSVCIKANAQSCGECIQVAETCGWCGDEKFLTVGESM
SARCDDLESLKKRNCVVDKIENPRGSIDINKNKPVTNRKMDRAEKLKPEEITQIQPQKLT
LTLRSGEPLTFKLKFKRAEDYAIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDF
RIGFGSIVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLTLTDKGDEFNRLVSQQQ
ISGNLDSPEGGLDAIMQVAVCEDQIGWRNVTRLLVFSTDAGFHFAGDGKLGSTVLPNDGR
CHLENNMYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTR
SSNSSNVIKLIIDAYNSLPFEVILENGRLPEGVSITYKSICKNGVEGTGENGRKCSNISI
GDEVSFEISVESQKCPSNGKPEIIKIKPLGFTEEVEIVLNFICDCQCAGEGEQNSETCHH
GNGTFECGACKCNDGRIGRVCECSKDEVRIEDLDANCRKDDGTDICSNNGDCVCGTCECK
KRENPAEIYSGKYCECDNFNCDRSNNKLCGGHGHCECRQCICDANYTSSACDCFLETASC
LAKNGQICNGRGTCECGICRCTDPKFQGPTCEVCPTCPGVCAEHKDCVQCRAFETGEKKD
TCERDCSYFQLIKVKDRDKLPQPTDQSFPLTHCKERDANDCWFYYTFAIRNDNKEVYVVD
CSMYLHRGTNPRLRSAHRGILTHDFEENCTCDLV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcggttacttttaatagcaacgttatcagcggtcctctgtggcagctgggca
cagcaagagggaagcgtatgcatcaaggcaaacgcacagtcgtgtggggaatgcatccag
gtcgccgagacgtgtggatggtgcggagatgaaaaattcctcactgtgggtgagtccatg
tcggctcgctgtgatgatctggagtccctgaaaaagagaaattgtgtcgtggacaaaatt
gagaacccacgcggaagcatcgacatcaacaagaacaagccagtcaccaaccgcaagatg
gacagagctgagaagctgaagcccgaggagatcacccagatccagccgcagaaactcact
ctgacgctccgatctggtgagcccctgacttttaagctgaaattcaagcgtgctgaggat
tacgccatcgacctgtattacctcatggacctctccttctccatgaaagatgatttggaa
aacgtgaagaacctcggcactgacctcatgagggaaatgcaggagattacctcagatttc
aggattggtttcggctcaattgtggaaaagaccgtcatgccttacatcagcaccacgcca
gccaggctcatcaacccctgcacggggaaccagaactgcaccagccccttcagctacaag
aacgtcctgacgctgacggacaagggagacgagttcaatcgcctggtcagccagcagcag
atctcaggaaacctggactctccagaggggggcttggatgccatcatgcaggtggcagtc
tgtgaggaccaaatcggctggaggaacgtgactcgtctgctggtgttttccaccgacgcc
ggtttccactttgctggagacggcaaactgggcagcaccgtcctgcccaacgacgggagg
tgtcacctggagaacaacatgtacaccatgagccactactatgactacccctccatcgcc
cacttggttcagaaactgagcgaccacaacatccagaccatctttgccgtcactgaggaa
ttccagcccgtctacaaggagctgaaaaatctcattcctaaatcagctgttggcacacgg
tcctccaactccagcaacgtgatcaaactcattatcgatgcttacaattctttgccgttt
gaggtcattctggaaaacggcaggctgccagagggagtttccatcacctacaagtccatc
tgtaagaacggtgtggagggaaccggggagaacggcaggaagtgctccaacatctccatc
ggggacgaggtgtctttcgagatttctgttgaatcccagaagtgtccttcgaacggcaag
cctgagatcattaaaatcaaaccgctgggcttcaccgaggaggtggagatagttctgaac
ttcatctgcgactgtcaatgcgccggcgaaggagagcaaaacagcgagacgtgccaccac
ggcaacgggacctttgagtgtggagcctgcaagtgtaacgacggacgtatcgggcgtgtt
tgcgagtgcagcaaagacgaagtgcggatcgaggatctggatgccaactgccgaaaagac
gacggtacggatatctgcagcaacaacggcgactgcgtctgcggcacctgcgaatgcaag
aagcgggagaatcctgcagagatctacagtggcaagtactgcgagtgcgacaacttcaac
tgcgaccgctccaacaacaagctctgcggaggacatgggcactgcgagtgcagacagtgc
atctgtgacgcaaactacacaagcagtgcctgcgactgcttcctggagaccgcctcctgc
ctcgccaagaacgggcagatctgtaacggccgcggtacttgtgaatgtggaatctgcaga
tgcaccgaccccaaattccagggtccgacctgtgaggtctgtcccacctgccccggcgtc
tgcgctgagcacaaagactgcgtgcagtgtcgagcattcgagaccggcgagaagaaggac
acgtgtgagcgggactgcagctacttccagctgatcaaggtgaaggatcgcgacaagcta
ccccaacccacagaccagagcttcccactgacgcactgcaaagagcgagacgccaacgac
tgctggttctactacaccttcgccattaggaacgacaacaaggaggtctacgtggtggac
tgctcaatgtatcttcatcggggaacaaatcctcgacttcgtagcgcacatcgtggcatc
cttacacatgattttgaagaaaactgtacttgcgatttggtttag
DBGET
integrated database retrieval system