KEGG   Cottoperca gobio: 115023127
Entry
115023127         CDS       T07513                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
cgob  Cottoperca gobio
Pathway
cgob03271  Virion - Rotavirus
cgob04145  Phagosome
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04514  Cell adhesion molecules
cgob04530  Tight junction
cgob04810  Regulation of actin cytoskeleton
cgob04820  Cytoskeleton in muscle cells
cgob05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    115023127
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115023127
   04514 Cell adhesion molecules
    115023127
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115023127
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115023127
   04530 Tight junction
    115023127
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115023127
   04810 Regulation of actin cytoskeleton
    115023127
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    115023127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgob04131]
    115023127
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgob04147]
    115023127
   04515 Cell adhesion molecules [BR:cgob04515]
    115023127
   04090 CD molecules [BR:cgob04090]
    115023127
Membrane trafficking [BR:cgob04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115023127
Exosome [BR:cgob04147]
 Exosomal proteins
  Proteins found in most exosomes
   115023127
Cell adhesion molecules [BR:cgob04515]
 Integrins
  Integrin beta subunits
   115023127
CD molecules [BR:cgob04090]
 Proteins
  115023127
SSDB
Motif
Pfam: Integrin_beta EGF_integrin Integrin_B_tail PSI_integrin I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 115023127
NCBI-ProteinID: XP_029310147
Ensembl: ENSCGOG00000015317
UniProt: A0A6J2RGZ5
LinkDB
Position
17:3277461..3294395
AA seq 754 aa
MDLRLLLIATLSAVLCGSWAQQEGSVCIKANAQSCGECIQVAETCGWCGDEKFLTVGESM
SARCDDLESLKKRNCVVDKIENPRGSIDINKNKPVTNRKMDRAEKLKPEEITQIQPQKLT
LTLRSGEPLTFKLKFKRAEDYAIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDF
RIGFGSIVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLTLTDKGDEFNRLVSQQQ
ISGNLDSPEGGLDAIMQVAVCEDQIGWRNVTRLLVFSTDAGFHFAGDGKLGSTVLPNDGR
CHLENNMYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTR
SSNSSNVIKLIIDAYNSLPFEVILENGRLPEGVSITYKSICKNGVEGTGENGRKCSNISI
GDEVSFEISVESQKCPSNGKPEIIKIKPLGFTEEVEIVLNFICDCQCAGEGEQNSETCHH
GNGTFECGACKCNDGRIGRVCECSKDEVRIEDLDANCRKDDGTDICSNNGDCVCGTCECK
KRENPAEIYSGKYCECDNFNCDRSNNKLCGGHGHCECRQCICDANYTSSACDCFLETASC
LAKNGQICNGRGTCECGICRCTDPKFQGPTCEVCPTCPGVCAEHKDCVQCRAFETGEKKD
TCERDCSYFQLIKVKDRDKLPQPTDQSFPLTHCKERDANDCWFYYTFAIRNDNKEVYVVD
CSMYLHRGTNPRLRSAHRGILTHDFEENCTCDLV
NT seq 2265 nt   +upstreamnt  +downstreamnt
atggatctgcggttacttttaatagcaacgttatcagcggtcctctgtggcagctgggca
cagcaagagggaagcgtatgcatcaaggcaaacgcacagtcgtgtggggaatgcatccag
gtcgccgagacgtgtggatggtgcggagatgaaaaattcctcactgtgggtgagtccatg
tcggctcgctgtgatgatctggagtccctgaaaaagagaaattgtgtcgtggacaaaatt
gagaacccacgcggaagcatcgacatcaacaagaacaagccagtcaccaaccgcaagatg
gacagagctgagaagctgaagcccgaggagatcacccagatccagccgcagaaactcact
ctgacgctccgatctggtgagcccctgacttttaagctgaaattcaagcgtgctgaggat
tacgccatcgacctgtattacctcatggacctctccttctccatgaaagatgatttggaa
aacgtgaagaacctcggcactgacctcatgagggaaatgcaggagattacctcagatttc
aggattggtttcggctcaattgtggaaaagaccgtcatgccttacatcagcaccacgcca
gccaggctcatcaacccctgcacggggaaccagaactgcaccagccccttcagctacaag
aacgtcctgacgctgacggacaagggagacgagttcaatcgcctggtcagccagcagcag
atctcaggaaacctggactctccagaggggggcttggatgccatcatgcaggtggcagtc
tgtgaggaccaaatcggctggaggaacgtgactcgtctgctggtgttttccaccgacgcc
ggtttccactttgctggagacggcaaactgggcagcaccgtcctgcccaacgacgggagg
tgtcacctggagaacaacatgtacaccatgagccactactatgactacccctccatcgcc
cacttggttcagaaactgagcgaccacaacatccagaccatctttgccgtcactgaggaa
ttccagcccgtctacaaggagctgaaaaatctcattcctaaatcagctgttggcacacgg
tcctccaactccagcaacgtgatcaaactcattatcgatgcttacaattctttgccgttt
gaggtcattctggaaaacggcaggctgccagagggagtttccatcacctacaagtccatc
tgtaagaacggtgtggagggaaccggggagaacggcaggaagtgctccaacatctccatc
ggggacgaggtgtctttcgagatttctgttgaatcccagaagtgtccttcgaacggcaag
cctgagatcattaaaatcaaaccgctgggcttcaccgaggaggtggagatagttctgaac
ttcatctgcgactgtcaatgcgccggcgaaggagagcaaaacagcgagacgtgccaccac
ggcaacgggacctttgagtgtggagcctgcaagtgtaacgacggacgtatcgggcgtgtt
tgcgagtgcagcaaagacgaagtgcggatcgaggatctggatgccaactgccgaaaagac
gacggtacggatatctgcagcaacaacggcgactgcgtctgcggcacctgcgaatgcaag
aagcgggagaatcctgcagagatctacagtggcaagtactgcgagtgcgacaacttcaac
tgcgaccgctccaacaacaagctctgcggaggacatgggcactgcgagtgcagacagtgc
atctgtgacgcaaactacacaagcagtgcctgcgactgcttcctggagaccgcctcctgc
ctcgccaagaacgggcagatctgtaacggccgcggtacttgtgaatgtggaatctgcaga
tgcaccgaccccaaattccagggtccgacctgtgaggtctgtcccacctgccccggcgtc
tgcgctgagcacaaagactgcgtgcagtgtcgagcattcgagaccggcgagaagaaggac
acgtgtgagcgggactgcagctacttccagctgatcaaggtgaaggatcgcgacaagcta
ccccaacccacagaccagagcttcccactgacgcactgcaaagagcgagacgccaacgac
tgctggttctactacaccttcgccattaggaacgacaacaaggaggtctacgtggtggac
tgctcaatgtatcttcatcggggaacaaatcctcgacttcgtagcgcacatcgtggcatc
cttacacatgattttgaagaaaactgtacttgcgatttggtttag

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