Cottoperca gobio: 115023458
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Entry
115023458 CDS
T07513
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115023458 (focad)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115023458 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
115023458
NCBI-ProteinID:
XP_029310314
Ensembl:
ENSCGOG00000024305
UniProt:
A0A6J2RK28
LinkDB
All DBs
Position
18:8074054..8117150
Genome browser
AA seq
1809 aa
AA seq
DB search
MMESLKIRFDFPSPVIQAQTVRNLVAAVLKEKGPNGQITQSSTQGPALESLWQQSCSDCA
LLRSSCCDAVVLLVDQGHADLHYILNRVLNLLPSARNVQGLIKVIGRLLQMQADQRDGEA
HFTCPYSIRSSPHPYITVLENRVDCWPALLLEIDDFIRQAAERNEPAYITMLAPFLRYLY
CEPQRQSQHALLRHSLLRVLLPIQPGAGSDLQNKDQELTSPVSDSLLHCLCQLVPHMQVD
SVEAVLELCGFVDALLQGLVPASEEEEERWRTERAELLLQLLCACQCCLKLNGNCRPLLN
LLQKLLPVCQQELPLDELLLGVALLLLEVPASQQTSLLSLALSLVPEQTELSPWLSPVLV
LPVLQLLSCSGLTEALADQRTHRLNQDLAHSLLRRISRETDEPRQSGPPLALPLSSWYNE
LSVALSTLRKVTDNPAVAADWLLSVISALSSSQNQLCSLTLIVTHLIITGREDVCQLALN
ACQAIAAADPCQVPSLIPVLLYKLGKEKNAVLAHAVLNCLPNLGTHKLCVPMVLQTLHML
ASAPKLRAMAMRLMAALWKKQDRIYPDLQRLLSLQDSRVTVGKDAQWEQILARAACLRDI
CRERPYQHGGDMLAAITLTLKQCTRPDMATPAALALQGLQELCRAEVVDLVSTWRSLGPE
LSCDSRPLMVKIIAELLTLVPQLPVKSEEYEKLKEEVVSFLWNYAVSKDPEVASCGYRAL
ADFPEAVHTINLLPEAARPATKPLENEEDEEGNEKEEEEQDLSIPGSSYVKLMALTPVSV
LPAFDLFLTSLVKQEMRQMPRGVYFSALRGGNLRTDQGKTMAGIPSFMLKTYEKNKQPGL
KPGLAAGLLLSYELPVQTDREGKRLDRFLISRSRSYQQTLASLVHEVNIQPSEWHRALLL
PQAWRGFMSRAFHAVLQGRRADLEIQQKQGKEEPQELQYKQHCAWLWARDQLADVIKAAT
KDSPVVQGNSILALSGLAAVLAKYESNLPADTDGDLGAGPEFVPTASWLAIVLNTLLSIS
SSSYKAKGQVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLMQVLSALQ
AGLPGSTTADDSQAVQFHSGLALGMVLSSLHHQRLSDVQKDTDVLLSSLEALESCSFDPN
LEYNTGCVLGLGLVLAALCSSGQTDQHVHITQTLDKLLSSLQDSSGQGRMLQEVLAYSVA
CVGVSAFSGGLIDAAKAEEVMNTLRTLTEESQQTPGFSLALGLMVHGLSMSGHGKAVDIL
PRLLAAWIKILLAEGCPTMQRLAAVNGLVALVGSERYLFQQTGEMELSSQQQSRLNEVIR
AITQIITFSGAIGLQSNSTCLVGHLHLAHMSTSHSHTAVPPDFSYLSEKSVIRSIVDFIT
EAGTKGPEFALPALVKSALTPLASVGASFQYPPINWSAVLSPLMRLSFGEDVQHQCVVLA
ACQAQSSQSASLFLGSWLSPPLVHSLSYQTRAHLYESLGLWMKHVAEDKLQVHMESLGLQ
QFQEDLRPQRLSLCRSLLQGLAQAMALPNPPNNCWTILCSTTEKIFALLPNQIQDNEVDL
YVGITKCLSEMSDAEIDRITKVTEAQMEKTCFVLAHLTSQGRVPLLGLNDVIAGVLSGWS
SRRVGWLLLQTFYQCRLATNPNTGVMKRMEWLLELMGHIRNVAYDATSVTCGDTKLATDF
LFQVFAAAVVSWGDHYMPLLLGIRAQWFPWQPGSKPQTLQHCLYGEESFTDNALPQCMLG
MSHSLALLLDKEPWSSQRHKFIDWLFSITEGPEQSLSATTIRAAKAALLSLKSSAEFKKK
AVWTRAYGW
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagtttgaagatacgttttgatttccccagccccgtcatacaagcacagacg
gtgagaaatcttgttgctgctgtgctgaaggagaaggggccaaatggacaaatcacacag
tcctccacccagggtccagcgttggaaagtctttggcagcagagctgcagtgactgcgct
ctgttgcgttcatcctgctgcgatgccgtggtgctgctggtggaccaaggccacgcagac
ctgcactacatactcaacagagtcctcaatctcctgccctctgccagaaatgtccagggg
ctgataaaggtcattggacggctgctacagatgcaggcggaccagagagacggagaagca
cacttcacctgtccttactccatcaggagcagccctcacccatacatcactgtactagag
aaccgagtggactgctggccagctctgctgctggagattgatgacttcattcggcaggct
gctgagagaaatgaaccagcctacatcaccatgctggcccccttcctgcggtacctgtac
tgtgaacctcagaggcaatcccagcacgcactcctgcgccacagtctcctcagggtgctg
ctgcccatacagccaggagctggatcagacctccagaacaaggaccaggaactgacctct
ccggtgtctgacagcctgctgcactgcctctgtcagctggtgccacacatgcaggtggac
agtgtggaggcggtgctggagctgtgcggattcgtagacgctctgcttcagggtctcgtc
ccggcgtcggaggaggaggaggagcgctggaggactgagagagccgagctgcttctgcag
ctgctctgtgcctgccaatgctgcctcaagttaaatggaaactgccgacctcttctcaac
ttattacagaagctcctgcctgtctgtcaacaggagctgccattggacgagctgttgttg
ggcgtggccctgctcctgctagaagtccctgcatcccagcagaccagcttgctcagtctg
gctctgagtttagtccctgaacagactgagctgtcgccctggttgagtccagtcctggtt
cttcctgtgctgcagctcctgtcctgctccggcctcactgaggctctggctgaccagcgt
acgcacagactcaaccaggatttggcccacagtctgctccgcaggatcagcagggagacg
gatgaaccccgacagtctggtccaccattggcacttcctctcagttcctggtacaacgag
ctcagtgtggccctatccacactgcgcaaagtgacagataatccggcagtggcagccgat
tggctgctgtcggtcatctcggccctgtcctccagccagaaccagctctgctccctcacc
ctcatcgtgacccatctcatcatcacgggtcgagaagacgtctgccagctggctctgaat
gcatgccaggccatcgctgcagccgacccctgccaggtcccttcacttattcccgttctg
ttgtacaaactggggaaggaaaagaatgcagtcctggctcacgctgtgctgaactgcctg
ccaaacctcgggactcataagctgtgtgtccccatggtgctgcagactctccacatgctg
gccagcgcccccaagctgagagcaatggcaatgcgcctcatggctgctctttggaagaaa
caggatcgtatctaccctgatctgcagcgtctgcttagcctgcaggacagtagggtgacg
gtggggaaggacgcccagtgggagcagatcctagccagagctgcctgcctcagggacatc
tgcagagagaggccttaccagcatggaggtgacatgttggctgcaattacactcactctg
aaacagtgcaccagaccagatatggcaacccctgctgctctcgccctgcaaggactacag
gagctgtgccgggcagaggtagtggacctcgtctcaacatggagaagtctcggacccgag
ctgagctgcgactcccgtccactgatggtcaaaatcatagctgaacttctgactctggtt
ccccagctccctgtcaagtcagaagaatatgagaaactgaaggaggaggtggtcagcttc
ctctggaattatgctgtgagcaaggacccagaggtggccagctgtggctacagggctttg
gcagattttcctgaagcggtccacacaataaatcttcttcctgaggcagccagaccagct
acaaagcctcttgaaaatgaggaggatgaagaagggaacgagaaggaggaagaagagcag
gatctctccatcccaggttcatcttatgtgaagctgatggctctcactcccgtatctgtt
ctgccagccttcgatctctttttgacctcactggtgaagcaggagatgcgccagatgcca
cgtggggtatacttctctgccctgagaggcgggaacctgcgtacagaccagggtaaaaca
atggctggaattccatcattcatgctgaaaacctacgagaaaaacaagcagccggggctg
aagcctggactagcagctggactgctgctcagttatgagctgcctgtgcagacggaccgc
gaaggcaaacggctcgatcgtttcctcataagccgcagccgcagctaccagcagaccttg
gcatccctcgttcatgaagtgaacattcagccctccgaatggcaccgtgctttgctcctg
ccccaggcctggcgaggtttcatgagccgagctttccacgctgtcctgcagggtcgacgt
gctgatttggaaatacagcagaaacaaggcaaagaggagccacaagagctacagtacaaa
caacactgtgcctggctgtgggccagagatcagctggcagacgtcatcaaagctgctaca
aaggacagtcctgttgttcagggaaactccatcctggctctgagcggcctggctgctgtc
ctggctaaatatgagagcaacctgcctgctgataccgacggcgacctcggggctggacca
gagtttgtgcccacagccagctggttggctatagttctcaacaccctgctcagcataagc
agcagcagctataaggccaaaggtcaagttttcccatggttccttcatcgttcctactcg
ggtgagaacacagcgagcgcaatagctcgctcctgtgccagcctggcgttgtcactgctg
gtccccgtgctggtggtgtggcagagggacggtctgatgcaggtcctgtcagcgctgcag
gccggcctgccgggctccacaaccgctgacgactcccaggccgtccagttccactccggc
ctggcgctcggcatggtgctgtccagcctgcaccaccagcgcctgagtgatgttcagaag
gacactgatgtcctcctcagctctctggaggctctcgaaagttgttccttcgaccccaac
ctggaatacaatactggctgcgtgttaggtctgggtctggtgctcgcagctctctgcagt
agtggacagacggaccaacatgtccacatcacccaaacactcgacaagctgctgtccagc
ctgcaggacagcagtgggcagggacgcatgctgcaggaggtcttggcgtactctgtggcg
tgtgtgggtgtctctgccttcagtggaggccttatagatgcagccaaggctgaggaggtc
atgaacactctgcgcaccctgactgaggagagccaacagactccaggcttctccctggct
ctagggttgatggtccacggtctgtcgatgtccggccatggtaaagcagtggacatcctc
cctcgtctgctggctgcttggataaagatcttactggcggagggttgtcccactatgcag
cgactggccgccgtcaacggcctcgtggctttagtaggatctgagcggtacctctttcag
caaacaggtgagatggagctttcctcccagcagcagagcaggctgaatgaggttattcga
gccatcacacagatcataacattctcgggagccattggtttgcagtccaacagcacttgt
ttggttggtcatttgcatttggcccacatgtccaccagtcacagtcacacagcagttcct
ccggatttcagttacctctcagagaaaagcgtcatcagatccatcgttgacttcatcaca
gaggcggggacaaaaggtccagagtttgcccttccagctctggttaagtccgctctgact
ccactggcatcagttggagccagtttccagtacccacccatcaactggagtgctgtgcta
tctcctctgatgaggctcagctttggagaggatgtgcagcatcagtgtgtagtgctggca
gcatgtcaagctcagtcttctcagagtgcctctctctttctgggctcctggctgtcaccg
cctcttgtgcacagtctcagttaccagactcgggctcatctgtatgagagcctgggtttg
tggatgaagcatgttgctgaggacaagctccaggtccacatggagagtctgggcctgcag
cagttccaggaggaccttcgaccccagcgtctgtccctgtgccgctccctgctgcagggc
ctcgctcaggccatggctctcccgaacccccccaacaactgctggaccatcctctgctcc
accacggagaagatctttgccctgctgcccaaccaaatccaggataatgaagtggatttg
tatgttggaatcaccaaatgtctgtctgagatgtccgatgcagagattgaccgaatcaca
aaagtcacagaggctcagatggagaagacctgcttcgtcctggctcacttgacctcccaa
ggcagagttcccctcctgggtctcaatgacgtcattgccggtgtgcttagtggttggtca
agccgcagagtcggctggctccttctgcagactttttaccagtgtcgcctggccaccaac
cccaatacaggcgttatgaaacgaatggagtggctcctggagctaatgggacacatccga
aatgttgcctatgatgcaacctccgtcacatgtggagacacgaaactggccacagacttc
ctgttccaggttttcgccgctgctgtagtttcctggggtgaccactacatgcccctcctc
cttggcataagggcccagtggttcccatggcaacccggctccaagccccagactctgcaa
cactgtctgtacggcgaggagtcattcactgacaatgccctgcctcaatgcatgctggga
atgtcccacagtctggctctgcttctggacaaagagccctggagcagccaaagacacaag
ttcatagactggctttttagcatcacagaaggtcctgagcagagtctgtcggccacaacc
atccgcgcagccaaagccgccctgttgtccctgaagtcctccgctgagttcaagaagaaa
gctgtgtggaccagagcatacggatggtag
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integrated database retrieval system
