Cottoperca gobio: 115023681
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Entry
115023681 CDS
T07513
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cgob
Cottoperca gobio
Pathway
cgob04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115023681 (frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cgob04091
]
115023681 (frem1)
Lectins [BR:
cgob04091
]
C-Type lectins
Lecticans
115023681 (frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
115023681
NCBI-ProteinID:
XP_029310734
Ensembl:
ENSCGOG00000024405
UniProt:
A0A6J2RL89
LinkDB
All DBs
Position
18:8233982..8264583
Genome browser
AA seq
2184 aa
AA seq
DB search
MGSQGQTMAWTLLPVLLLVMTCSSHGSLVKVNKGLKAKQGQSAYLQDGDLQFHIPRQKDA
CKVEVVLNEPITQRVGKLMPQVFDCHYLADEVKYVHNGCPLLKEDTVKLRLYRFTETETY
MEVFSLHVDIIEPDCSIIKLGPKSLEVPEFYSLSDALDGNVVSFHYEQRSSLECSIHLNS
HHTHLPAHGQLVTGEPEKATIRGDEPESFIDLRQQLDNKARAMCKSEDCLKGLKLVKFTK
IPCDDFLMMGLRYQHIDPPSPDIDYIAIRLDLKDTRSGSIYQSEQAWIPVQIVGAMPNQP
PKPSFMSMFILEVDQFILTPLSTATLDSEDEETPKQLLVFNITKPPIDGFITHLSDHTRP
ISSFTWLDLNDMLIGYQPPNSSHTQRRNYEVELDVHDFFFEKSPSMTVHMSVRNADTNAP
RVSWNMGLSLLEGQSRPIMWEQFQIVDNDNMNVVRIITVDGLQHGRLTVRGGKGFMFTVN
DIKAGVVRYHHDDSDSTKDFIIFRITDGHHQTRHKFPIKILPKDDSPPFLITNMLLEVSE
GQMALLRGSTLQASDMDSSDDYILYNITRPPQAGEVMKMPTSGLTGYPVSHFLQKDLSQS
MVYYRHLGNKVFDDSFEVVLSDFHDPPNLSEPQVVMVHIEPVPDQPPKEVPGSSRCLVIK
ETEVVHVTRQQLHFVDQESPDTELTYTVTTPPFYTGPYSSPDAGRLFLVDSIPKFSKDSN
APVLRLFTQHAVNFMKVAYMPPVMDIGPYPQYIQFVLSVTNHLGKTVTGICFNITVVPVD
NQPPQVITNPLTVNEGGEGWLGPEHLLLSDVDSMEEALLVALQREPQHGALQRGGIPLKP
GHAFTVKDLKSLKVRYNHDSSETVEDNIEFIATDGTNSVNFVLQVKVIPINDEVPVLVAG
LKPVLSCAEGQAVVITAEYIYATDADSDNSSLAFLIARQPYHGVVLRNSVVIDRFIQADI
TAGIITYKHTGLEIGLTPRHDTITFVISDGETENSPLCCGEENSSRNRDMPQLRHSLPVY
DLKITVFPVDSQPPSLTTGDIFLVDEGGSAPITASHLKASDVDTVLDKLVVNLISPPQFG
YIENVLPSPGFEKSNTGISIASFSYKDIIDGHVNYVQSRHQRMEPTADQFMLCVSDGKHS
SAQVPFYIIINPTNDEIPQFVARNITVREGEMKQLDVSVLHAMDLDVPKNSLLFSVVKAP
QHGSIITHSSEKQIYKRREASPQSSVLDFTMTDLSNGMDLMYMHDDSENTEDSFTIELTD
GSHQLQRQVMVKVLPVNDEEPHVIRNNGLEVEPGEARLISSVTLFAQDSDTPASKVMYIF
ESVPTQGLLQLKEGQDWVTLTTVRNCTQEMVDMNLLRYMHTGLHGAKTQDFFVFYLLDGK
NQSPPQHFHISVKDLEKGNIAMFVKTLNIGRGDRVVLTTNVLLATDGAEKPEELLYIITN
PPAHGHIEYIKHPGLAISTFSQMDIAANIVAYVHDNRATTPTETFQFVLSNGKTSQNGSF
EIAVEMVDRILPSLSSNKGISVPQGSSMILGPDCLVMSDPDTPPSALTFVLLQPPQYGML
LLGLTTLTAGSNFTQRDIKELEVTYKHDGGPSQIDRFAFTASDSTKRGFLLDGKLHKEPV
FFTIQIKPLDNSCPEVVKLLPLWKAEPLGDGRHGIFISSRELKAKDSDSREEELIFSIVR
QPYFGYLENITTGGFVPQRFSQMELNKRTISYIINPDRESLSDSLEFTVSDSLGNTGPSH
ILKFSWSSVELSQPEYSVCEEQGTFSLDIIRKGNLAESSYITVKVKEVTATAGKDFIINP
SSLIQFDPGVSKRSWQTEIVQDHLEEAIETFEVLLVFPEATMIGRINKAQVTIKDSGRGQ
QRLHQHQKAPVLVGKEIRSDTYPQHGSIQLEKLPLGTESAVWTRGDSISRPATIVPKRKL
KVMRNPKSIAPSTVFHNGTDTVYTYHGIMQMKVEDDTTPSRKGRKANIRVVSRGALQQVP
AVITKSKSDPQRKISKPQKTAPAKGHTTADNSVPKPCVPELMGLLHFNQTINQLFHCDGV
SWKPWAPNDQMVSAQNCPQGWTFHSGYCYTLSTEHKVTWSTANRACRERYKGTLASVLSK
VDMDWLWDFGGRKPFWIGLNDRDGRGRWEWSGGEPVSYTNWRKMPPRSKMKGSKKCVLVW
RRAKWQIRDCKTSRGQRFVCSIRT
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacagggtcaaacaatggcctggaccttgcttcctgtgcttctgctggtaatg
acctgctcatcgcacggttcccttgtgaaagtcaataaaggtttaaaggcgaaacaaggt
cagtcagcctacctccaggacggtgacctgcagttccatattccccgtcagaaggatgca
tgcaaggtggaggtggtgttaaatgagcccataactcaacgagtaggaaaactcatgcct
caggtatttgattgccactatctggctgatgaggtaaagtatgtccataatggctgtcca
ttgttaaaggaggacactgtcaagcttcgactgtacaggtttacagagacagagacatac
atggaggtattttctctccatgtggacattattgaacctgattgcagcatcataaagcta
gggcccaaatccttggaggttcctgaattctacagcctttctgatgctttggatggcaat
gtggtgtccttccactatgagcagaggtctagcctagagtgtagcatccatttaaatagc
catcacacccacctgccagcccatggccaactggtcacaggagagccagagaaagctacg
ataagaggggacgaaccagagagcttcatcgacctacgacagcagctagataataaagcc
agagcaatgtgtaaatctgaagactgcctgaagggtctgaagctagtgaagttcaccaaa
attccctgtgatgacttcctgatgatggggctgaggtatcagcacatagaccctccatct
ccagacatagactacattgcaatcagactggatctcaaggacaccaggagtggcagcata
tatcaatctgaacaggcctggattccagtgcagatagtgggtgcaatgcctaaccagcct
cccaaaccgtccttcatgtccatgttcatcttggaagtggaccagttcatcctcactccg
ctctccactgctacactagactctgaagacgaggaaactcccaaacagcttttggttttc
aacatcaccaaaccgcccatagacggcttcatcacccatttgtccgatcatactcgacca
atatcctcgtttacatggctcgatctcaatgatatgctcattgggtatcaacctccgaat
tcttcacatacccaacgcaggaattacgaggtggaattggatgttcatgatttcttcttt
gagaaaagcccatcaatgactgttcacatgtctgtaaggaatgcagacacaaatgcaccc
agagtgtcttggaacatgggcctcagtctgttagagggtcagtctcggccaataatgtgg
gagcagttccagattgtggacaacgacaacatgaatgtggttcgtatcatcactgtggac
ggcctgcagcatggacggctcactgtcagagggggaaagggcttcatgttcactgtcaat
gacatcaaagcgggcgtggttcgctatcaccacgacgacagcgactccaccaaagacttc
atcatcttccgcatcactgacggccaccatcagacccgacacaagttcccaatcaagatc
ctgccaaaggacgacagccctccattcctcatcaccaacatgctgctggaggtgtctgag
ggccaaatggcgttactgagaggctccaccctccaggcttcagatatggactccagcgat
gactacatactctataacatcacccgccctccacaggcaggagaggtcatgaaaatgcca
acgtcagggctcacaggttatcctgtcagccactttctgcagaaagacctgtctcagtcc
atggtttattatcgacacctaggaaacaaggtgtttgatgactcctttgaggtggtgctg
tcagatttccatgacccacccaacctgtcagagcctcaagtggtgatggtgcacatagag
cctgttccagaccaaccacctaaagaggttcctggttccagtcgttgtcttgtgattaag
gaaacagaagtggtccatgtaacacggcaacagcttcactttgtggaccaggagtcccca
gacactgagcttacatatacagttactactccacctttctacactggtccttacagcagt
ccagatgctgggaggttgttcttagttgacagtatacccaaattctccaaagactccaac
gcaccagtgctgaggctcttcacacagcatgcggtgaacttcatgaaagtagcctacatg
cctccagtcatggacatcggcccttacccccagtacatccagtttgttctctctgtaacc
aaccacctgggcaaaacagtcactgggatctgctttaacatcactgtggtgccagtggac
aaccagccgccacaggttattaccaaccctctgacagtaaatgaaggaggggagggctgg
ctcggacctgaacacttgttgctgtcagatgtggactccatggaggaagccctgctggtg
gcgcttcagagggaacctcagcatggagcgctgcaacgaggtggcatcccgctaaaacca
ggccatgctttcactgtgaaagacctgaaaagccttaaagttaggtacaatcacgatagc
tccgaaactgtagaggacaacattgaattcattgcaacagatggcaccaattcagtcaat
ttcgtcctgcaagtgaaggtgatacctatcaatgacgaggtcccagtgttggttgctggt
ttgaaaccggttctcagctgtgcagagggacaggcagtagtcatcacagctgagtatatc
tacgctaccgatgcagacagcgacaacagcagcctggcgttcctgatcgcccggcagcca
tatcatggtgtggttctccgaaactctgttgtgattgatcgattcatccaggcagatatc
actgcagggatcatcacctacaaacacacaggactggagattggactcactcctcgccat
gacaccatcacctttgttatttctgacggagaaacagaaaactctcctctatgttgcggt
gaagaaaattccagcagaaacagagacatgcctcagctacgacacagtctgcctgtgtat
gacctcaagatcacagtgtttccagtcgacagccaaccaccttctctgacaacaggagac
atctttttggtggatgaaggtgggtctgccccaataactgcatctcatttgaaggcatct
gacgtggacactgttctggacaaactggtggtcaatctgatttctccgccccagtttggc
tacattgaaaatgtcctgcccagtcctggctttgagaaaagcaacacgggcataagcata
gcgtccttttcatacaaagacataattgacggtcatgtaaactacgtacagtccagacac
cagaggatggagcccacagccgaccagttcatgctctgtgtatcagatggcaagcacagc
tctgcccaggtccccttctacattattattaacccgacaaacgatgagatcccacagttt
gtggctcggaacatcacagtacgagaaggagaaatgaagcagctggacgtatcagtttta
catgcaatggatctggatgtccccaagaacagcctgctcttcagtgtggtcaaagcccca
cagcacggaagcatcatcacccacagcagtgaaaagcaaatctacaagagacgagaggcc
agtcctcaatcctctgtgctcgacttcacgatgacagatctttcaaatggtatggatctg
atgtacatgcacgatgactcagagaatacagaggacagttttaccatcgagttgactgat
ggcagtcaccaactccaaagacaagtgatggttaaggtgctgccggtcaatgacgaggaa
cctcatgtcatcaggaacaacggactggaggtggagccaggagaagccaggcttatttca
agcgttacactgtttgcacaggacagtgatactcctgcgtcaaaggtcatgtatatattt
gagagtgttccaacccaaggactacttcagcttaaggaaggtcaggactgggtgacactg
acaacggtgagaaactgcacccaggagatggtggacatgaaccttctgcgctacatgcac
acaggcctgcacggtgctaaaacacaggacttctttgtcttctacttgttggatgggaag
aatcaatcacccccacagcacttccacatatctgtcaaagatctggaaaagggaaatatc
gcaatgtttgtgaagacattgaacatcggccgtggagatcgcgtggttctcaccacaaat
gtgctgttagccacagatggcgcagaaaagccagaggaacttctgtacatcatcaccaac
cctcctgctcatggacacatagagtacatcaaacatcctggactggccatctccaccttc
agccagatggacatagcagccaacattgtggcttatgtgcatgacaaccgagccaccaca
cccacagaaacctttcagtttgtcctgagcaatggtaaaactagccaaaatggaagcttt
gagattgcagtggaaatggttgatcgcatcctgccatctctgtcatccaacaaaggcatc
tcagttccacaaggctcctccatgatcctgggtcctgactgccttgtcatgtctgaccct
gacactccacccagcgccctgacctttgtccttctccagcctccccaatatggcatgctg
cttttaggtcttaccacactaactgctggctcaaacttcacccagagagacataaaggag
ttggaggtaacatataaacatgatggggggccatcgcagatcgaccgatttgcatttact
gcctctgacagcaccaaacggggtttcctgctggatgggaagttacataaggaacctgtg
ttcttcacaattcagatcaaacctttggataattcttgtcctgaggttgtgaagctgctt
cctctttggaaagcagagcctctaggcgacggacgacacgggatctttatttcatctcgt
gagctaaaggccaaagacagcgacagcagagaagaagagctgatattcagcattgttcgc
cagccctactttggttacctagaaaacattactacaggtggttttgtaccacagcgcttc
tctcagatggagctgaacaaaagaactatttcctacatcatcaacccagacagggagtcc
ctgtcagacagcctggagttcacagtgtcggattctttagggaacactgggccctcccac
atacttaaattcagctggtccagcgtggagctgtcgcagcctgagtactctgtgtgtgag
gagcagggaactttctcgctggatatcatccgaaaaggaaacctggcagagtcttcatat
atcactgtcaaggtgaaggaggtgaccgcaacagctggaaaagatttcatcataaaccct
tcttccctcattcagtttgatccaggagtgtcaaagaggagctggcaaactgagatagtt
caggatcaccttgaggaggctatagagacgtttgaagtgctgctggtcttccctgaagcc
acaatgattggccgcatcaacaaggctcaagtcacaatcaaggactcgggaagaggacag
cagagattacaccagcatcagaaggctcctgttcttgtaggaaaagagattcggtcagac
acatacccacagcatggatccattcaactagagaaactgcccctcggcacagaatcagca
gtgtggacccgtggagacagcatctccaggcctgcaacaattgtcccaaaaaggaaactc
aaagttatgcgcaatccaaagtctattgcaccttcaacagtttttcacaacgggacagac
actgtttacacgtatcatggtatcatgcaaatgaaagtagaggacgacaccactccatcg
aggaagggcagaaaggcaaacatccgtgtggtcagcaggggagcactgcagcaggtgcca
gctgtgattactaagtcaaagtcagatcctcaaagaaagatctcaaaacctcaaaaaaca
gcaccggctaaaggacatactacagcagataactccgtacccaagccctgtgtaccagaa
ctgatgggactcctgcatttcaaccagaccattaatcagctctttcactgcgatggtgtc
tcctggaaaccctgggcaccaaatgatcagatggtgagtgctcagaattgtcctcagggc
tggacctttcacagtggctactgttacaccctcagcactgagcacaaggtcacatggagc
actgctaacagggcgtgcagggagagatataaaggcactctagcaagcgttctctctaaa
gttgacatggattggctgtgggacttcggtggaagaaaaccattttggataggactgaat
gatagggatggccgaggacgctgggagtggtcgggcggtgaaccggtcagctacactaac
tggagaaagatgccccctcggtccaaaatgaagggaagcaaaaagtgcgtcctggtatgg
agaagagcaaagtggcaaatcagggactgcaagacaagtagaggtcaacgctttgtgtgt
tcaataagaacttga
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integrated database retrieval system
