Cottoperca gobio: 115023731
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Entry
115023731 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: synaptopodin-2-like
KO
K24066
synaptopodin-2
Organism
cgob
Cottoperca gobio
Pathway
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115023731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
115023731
Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
115023731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
115023731
NCBI-ProteinID:
XP_029310806
UniProt:
A0A6J2RKR6
LinkDB
All DBs
Position
18:complement(1783581..1801295)
Genome browser
AA seq
1606 aa
AA seq
DB search
MGTGDYICVTLRGGAPWGFTLREGEGDTYRPFLVSQVAAGGRAFLAGVCEGDEVVSLNGE
PCADLTLLRALALIDTSIDCLQLLVKRYCSIPSEESESEETLCVERDSSGEALESTTLHI
FSPQHSSQSPRELYISESRDEAYYGEFGSDAEVPKGPQLLYTQLHTPLPGGRRGREPVCK
EDDEEARRSFSPGNMVELQVSLSEQTLDGVGCTSLGSAHGIEGQLSNREAVEKIHTTTAS
HYVPCSARQPLGQHGVVLSSHSMLGQVEVILQQPAASGAGRGILSVGGPRVSGSVGSQSE
GEEGGGPCEGVPGSFTVSFGIPSEEATPAGEQDSETEGDPDKPNKHRAKHARLRRSESLS
EKHVKEAKSKCKRIALLLTAAPPNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPEYSDE
DDEENEDDTQETHTVEFTLLAPNGSELDKHFITNAHSGKGLLTINWDKGLLEIERNLNNQ
AEMECLPETKGKGAVMFAQRRMRMDEISAEHDELRRQGIPVEAVPVVEKKIEEHSYMQST
TESHAYMDVNIQQQSQQQQQQQQQQQQQYQQYQEQQYYEQQQNYQQQQHQQQQQQQLQQQ
QYQQQQQYEQQLYQQQQMYQQQQEYHQEQQQMQHYSTNINGTVQHQNSEMQSSFSNRTAK
PFPAGNMPATPYSPAMSGTNQDSVGQGEQIASRDERISTPASRTGVLSDARRRNAGKPMF
TFKEAPKVSPNPALLNLLNKKDKKIGFESGGEEDYLSLGAEACNFLQSQQIKQKNPPPVA
PKPVINPNSPPWSPQIEMTNQDMPQQAENSVFTPAVAPTIETTPAPELEPTPAPELEPTP
APALEPSPPPAPQEAPAGTTTDQQSTWTVPEIESQEPLQVTAQEENGHMNAPLQPEPAPC
WAPAQTPAQQPSNPNPNPNYWHPAQVQPQEPPPSQSPPPWVTRQPAQTQVQPQPPTNTWT
PQIQPTWAQPQEQPQSHSQVQPPWTHSHEQPNLQQMQPTWSQPQEPMQQPPQAPWAQPSQ
TDSQHQPPWVQQPQQKPQAQPPWAQQVEPESQPQPPWVQQPQHQAPQQAWPQTQAAGQPQ
PPWVSGQPQQQPSLNAWPPSQTQAQVQPPWTQAAQAQLPAQPQAILNPWQPVPPQAHSQP
SWAQPPSEHGQPPMNCWGQEQNQAQPQPPWAQSVPPQPTSQPNWQQSTSPPQPPMNTWPP
PQAQPQTTVNAWAPQPQQTPVNVSTSMVNTRPSPKPWQSPQNAPQSQTPPPPPQRMHSFT
IGQQASSHINPMASVLNPASQGSSFDMPAVRGKGADMFAKRLSRMEKFVVDSDTVQANKA
SRPPSPVASLPNEWKYTPNVRAPPSRSYNPMQSPSYPPGATKQPPSNSPSIKAKKKEKQK
PAPKPLNVLEVMRHQPYQLNSSLFTYGPAVEAAKPPEPKQDCSPPIPPVENQPIRYEQMA
PAQPAGPCNAPYPQQGYGMPMQPMQPMQPMQPMMHDGHYPQHPANVYPPSNPYQPPPGGP
YQQAYNQQYQQPAPPAYHPQAPQSPNQAYQQAPQAPYQPAHSPPYLAAPSVPYQPQPSSS
FVAPSFPVAARPESALGGIPGAAPKPKFTAKKSSAQVWKPTAVDEE
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattacatctgcgttactctgcgtggtggtgctccctggggattcacc
ctgagagagggagagggggacacctacagacctttcttagtctcccaggtagcagcaggt
ggtcgtgccttcctggcgggagtctgtgaaggtgatgaggtcgtgtcactcaacggagag
ccgtgtgcagatctcactcttttacgagccttggcgctgatcgacacatcgatcgactgt
cttcagctgcttgtgaagagatactgctccatcccctcagaagaatctgagtcagaagag
acgctctgtgtggagagggactcctctggtgaggctttagagagcaccaccctccacatc
ttctccccacagcacagctcccaaagtccaagggaactctacatatccgagtcccgggat
gaggcctactatggggagttcgggagcgacgcagaggttcccaagggaccccagctgctt
tacactcagctacatactcccttgcctggaggtcggagaggccgggagcctgtttgtaag
gaagatgatgaagaagcacggcggagcttctcccctgggaacatggtggagctccaggtg
tccctgtctgagcaaaccttggacggtgtgggctgcacctctcttgggagcgctcacggg
atagagggacaactctcaaacagagaggccgtcgagaagatccacaccaccactgcgtcg
cactacgtaccgtgttctgccagacagccgctcggccagcacggagtggtgctcagctct
cattcgatgctggggcaggtggaggtcattctacagcagccggcagcatcgggagcaggg
aggggcatcctgagtgtgggaggccccagggtcagtggaagtgttggatcccaaagcgaa
ggagaagaaggaggagggccctgcgagggagttcctgggtctttcaccgtctcctttgga
attccctcagaagaggcgacaccagcaggagagcaggactctgagacggagggtgaccca
gacaaacccaacaagcatcgggcaaaacacgccaggctcaggcgcagcgagagtctgtct
gagaagcacgtgaaggaggccaagtccaaatgtaaacgtattgctctccttctaacggct
gctccacccaaccccaacaacaagggggtgttgatgttcaagaaacatcggcagagggcc
aagaaatacacacttgtgagctacggcacaggagaagacgaaccagagtacagcgacgaa
gacgacgaggaaaacgaagacgacacacaagaaacccacactgttgaatttacccttttg
gctccaaacggttctgaattagacaagcatttcatcactaatgcccatagtggcaaaggt
ctgctaactatcaactgggacaagggtctccttgagattgaaaggaacctgaataaccaa
gcagagatggaatgtttgcctgaaaccaagggaaaaggtgccgtaatgtttgcccaacgg
cgtatgaggatggacgagatttctgctgaacatgatgagcttcggcgtcaggggattcct
gtggaagcagtgccggtggttgagaagaagatagaagagcactcctacatgcagtccacc
acagagagccatgcttacatggatgtaaatatacagcaacaaagccaacaacaacaacaa
caacaacaacaacaacaacaacagtaccagcaatatcaggaacagcagtactatgagcaa
caacagaactaccaacaacaacaacatcaacaacaacaacaacagcagctgcagcaacaa
cagtatcagcagcagcagcagtatgaacaacagctctatcaacaacagcaaatgtatcag
cagcagcaagaataccatcaagagcaacagcaaatgcaacactattctacaaacatcaat
ggcacagtccaacatcaaaacagtgaaatgcagagttctttcagtaatcgtactgcaaag
cctttcccagcaggaaacatgccggctaccccatattctcccgcaatgagtgggaccaat
caagattctgtgggccaaggagagcagatagcctcccgcgatgagcgcatttctacccct
gcaagtcggacaggtgttttatctgacgcaaggagaagaaatgctggcaaacctatgttc
acatttaaggaagcaccaaaagtatcgcctaacccagcactgctaaacctcctcaacaaa
aaggataagaagattggttttgagtcaggaggcgaggaagactaccttagccttggggct
gaggcttgtaatttcctgcaatctcaacaaattaaacaaaagaatcctccaccagtggct
ccaaagcctgtgatcaaccccaactctcctccttggtccccacagatagaaatgaccaac
caggacatgcctcaacaagctgaaaatagtgttttcacacctgctgtagcccccaccata
gagacaacccctgctccagaactagagccaacccctgcaccagaactagagccaacccct
gcacctgcccttgagccctctccccctcctgccccccaggaggctcctgctggcaccacc
acagatcaacagtccacatggactgtcccagagattgaatctcaagagcctctgcaagtg
acggctcaggaggaaaatggtcatatgaatgctcccctgcagcctgagcctgctccttgc
tgggctccagcacaaacaccagcacaacagccatctaaccctaaccctaaccctaattat
tggcatccagctcaagtgcagccccaggaaccacctccaagtcagtccccaccaccttgg
gtgacacgtcaacctgctcagacccaagtccagcctcaaccccccacaaatacttggacc
cctcaaattcagccaacctgggcccagcctcaagagcaaccacagtctcattcccaggtt
cagcccccctggacacactctcatgagcagccaaatctgcagcagatgcaaccaacttgg
agtcaacctcaagaaccaatgcagcagccgccccaggctccatgggcacagccatcacaa
acagactctcagcatcaaccaccatgggtgcaacaaccgcagcaaaaaccccaagcacaa
cctccttgggctcaacaggttgagccagaatctcagccccagccaccatgggttcagcaa
ccacagcaccaggccccacaacaagcttggccacagacccaagcagcaggtcagcctcaa
ccaccttgggtctcaggtcagcctcaacagcaaccctcactgaatgcatggcctccatca
caaactcaagcccaagttcagccaccttggacccaagcagcccaagcacaacttccagcg
cagcctcaagccattttgaatccatggcagccagtacctccccaggctcactcccaacca
tcatgggcccagcccccttcagaacatggtcagccccccatgaattgttggggccaagag
cagaatcaggcccaacctcaaccgccttgggctcaatcagttccaccccagcctacatca
cagccaaactggcaacagtccacttctccgccacagccaccaatgaatacgtggcctcca
cctcaggcacaacctcagacaactgtgaatgcctgggcaccacagccacagcaaacaccc
gtgaatgtttccacgtcaatggtgaacactcgtccctctccaaaaccttggcagtctcca
caaaatgccccacaaagccagacccctccacctccaccgcagcgaatgcactctttcacc
attggtcaacaagcttcatcacacattaacccaatggccagtgtcttaaacccagcatcg
caaggttcatcttttgacatgccagccgtcagagggaaaggagcagatatgttcgccaag
aggctgtctcgaatggagaagtttgttgtggactctgacaccgtgcaagcaaacaaggca
agccggccaccatcgccagttgcttccttaccgaatgagtggaaatacacacccaacgta
cgtgctcctccttcgagatcatataatcctatgcagtccccttcttatcccccaggagca
acaaagcagcccccttcaaatagtccttcaatcaaagccaagaaaaaggagaaacaaaag
cctgcccctaaacccctcaatgttttagaggttatgagacatcaaccctatcaactcaat
tcctcactctttacctatggcccagcagtagaggctgccaagccacctgaacctaagcag
gactgctcacctcctatcccacctgttgaaaaccaaccaattagatatgagcaaatggcc
cccgcccagccagctggaccatgtaatgccccatacccccagcaaggctatgggatgcca
atgcagcccatgcagcccatgcagcccatgcagcccatgatgcatgatggccactacccg
caacacccagctaatgtttatcctccctccaatccttatcaaccgccccctggtggtcca
taccagcaagcatataaccaacagtatcagcaacctgccccacctgcttatcatcctcaa
gcccctcagtctccaaaccaggcctaccaacaggccccgcaggccccttaccaaccagct
catagccctccctacctggcagctccctcagtaccttaccagccacagccttccagtagc
tttgttgctcccagttttcctgtagctgcaaggcctgaatctgcattaggtggcatccct
ggagctgctcctaaacctaagtttacagctaaaaagagctcagctcaggtgtggaagccc
acagcagttgatgaagagtga
DBGET
integrated database retrieval system
