Cottoperca gobio: 115024208
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Entry
115024208 CDS
T07513
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgob03036
]
115024208 (mms19)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115024208 (mms19)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115024208 (mms19)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
115024208 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
TPR_DNAAF5
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
115024208
NCBI-ProteinID:
XP_029311432
Ensembl:
ENSCGOG00000013268
UniProt:
A0A6J2RPP5
LinkDB
All DBs
Position
19:complement(18448366..18461267)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSHFSPLTFRACVVSVELHGTMAADSTLLLSLVEEFVSGLQDSKAKDTATGVKDGEFTVL
QLVEALGLSLTSSQPHTRARGVQLLSEVLHECYGGLTEREVEVLIAFYENRLKDHYVITP
PVLQGLRALTKCTVLPPGSAVSMLRSLFQDVHVQSLMLTERACVYNMLINLMGTREAELK
GLGADFVFGFVQSMDGERDPRNLLLAFQIAKSIILRGYDLGKFTEELFEVTSCYFPIDFS
PPPNDPHGITREELIQTLRDVLTGTPRFAEFLLPLIIEKLDSDVQSAKLDSLHTLTACVS
QYEHKDVAEFLEGLWASLRREVFQTSSEKIESAGLASLSALTSCLSRSVLNSDSEDSLST
FLDLVLKDCKHHLCEPDLKLVWPSAKLLQAACSASSRASHIITVSVMPALIEQYNSRAQC
SHRRTLLEVVQRFIQSVKTGRTSESEDSVFLDFRPSLCSVVFSALTETNSSLQITAASVL
TSLAQQTGLLLDSDIELAVDHLSRLLLTEEDGSVSLAVVECAGALAELHPEAFISQMIPR
LKKEMFSAPLVQDDNRAASEQHSHHAVRQRCLSALAAVSTRPSVVQQSTPVLLEVLSSAH
TGGVGFSVEEVVLACRSLQRIAEQVQDTEETGRCFHDIIIPRLLSLALQAALQGDGAPGG
RSPLLEEAVLSAMVPVISTSCSRLQPALAGQTASRAVSLFLDGDVSFLPDNSFPSHIRLL
KKQQGDAWSQSQMVCLLMGCVCSLPRSVEVPRIDELLSELEEMSCTCSHLLSHTSAAKCF
AGLVNKRAHGDSLDSRIQSTMTRVCSELDSASPSARTQAFTLVIWVAKALLLRYHPLFTT
LTDKLFSLLDDADLGPLAADGFSLLMSDSADILNRGCHADVRIMYRQRFFSENSAKLVEG
FNAAPQEKKPNYLKALSNIVNKLPKQVQVTELPALLSLLLEALSCPELGVQLSTLSCLQP
VLVDPPPALIQQLEALINRLLALTCSPAMDVRIASIRCIHAVSRFPEHEILPVRARVLRA
LARPLDDKKRLVRSEAVHARADWFLLGS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacttttcgcccctaacttttcgcgcatgcgtagtctcagttgagttacatggc
acgatggctgcggacagtaccctgctgctgtctctggtggaggaatttgtctctggacta
caggacagcaaggctaaagatacagcaacaggtgtcaaagatggagagttcacagtcctg
cagctggtggaagcactgggactgagtctgaccagctctcagcctcacactcgagccaga
ggagtccagcttctctctgaagttctgcacgagtgctatggaggtcttacagagagagaa
gtggaagtgctcattgccttttatgaaaaccgtctaaaggaccattacgtcatcactccg
cctgttttacagggtctcagagcgctgactaaatgtacggtgttgcctcctggctcagct
gtgtccatgctgaggtctttgttccaggatgttcacgtccagtctttgatgctgacagag
cgcgcttgcgtctacaacatgctcatcaacctcatggggaccagagaagccgagctgaag
ggtttgggggcggactttgtgtttggttttgtccaatcaatggacggagagagggatcct
cgcaacctcctgctggccttccagattgccaaaagcatcatcctccgaggttatgatcta
ggtaaattcacagaggagctgtttgaagtgacgtcctgctatttcccaattgacttcagc
ccccctcccaatgacccccacggcatcaccagagaggagctcatccagacgctgagggac
gtcctcaccgggacgccacggtttgctgagtttctgcttcctctcatcatcgagaaactg
gactccgatgttcagagtgcgaagctcgactcgctgcacactctgacggcttgtgtgtca
caatatgaacacaaggacgtggcagaattcctggagggactgtgggcgtccctgcgtaga
gaggtgtttcagacgtctagcgagaagatcgagtccgccggcctcgcttctttatccgca
ctcacttcctgtctgtctcgctcagtcctcaactccgactctgaagactccctcagcacc
ttcctggacctcgttctcaaagactgcaaacatcacctgtgcgagccggacctgaagctc
gtgtggccgagcgccaagctgctgcaggccgcctgcagcgcctccagcagggcgagtcac
atcataaccgtgtccgtgatgcccgctctcattgagcagtacaacagcagagctcagtgt
tcccacagacgaacattactggaggtggtgcagcgatttatccagtcagtgaaaaccggc
cggacttcagagagcgaagacagtgtgtttttagacttccgtccgtctctgtgcagcgtt
gtgttttcagcgctgacggagacgaactccagtctgcagatcactgccgcctctgttctc
acctcactggcacaacaaacaggtctgctgttggactctgatatcgagctggctgtggat
cacctgagcagactgctgctgacggaggaggacggcagcgtcagtcttgccgtggtggag
tgtgccggagccctggcagagttacacccggaagcttttatctctcaaatgatcccaaga
ctaaagaaggagatgttttctgcgcccctggttcaagacgacaacagagccgcttctgag
cagcattcccatcatgcagtgcggcagcggtgtttgtccgctctggctgcggtgtccacc
cgacccagcgtagtgcagcagagcacacctgtcctcctggaggtcctcagctccgcacac
acaggtggtgtcggtttctcggtggaggaggtggtgttggcgtgtcgcagcctccagaga
atagcagagcaggttcaggacacggaggagacggggcgatgcttccatgacatcatcatc
ccgcgcctgctgtctctggcgctccaggcagcgctgcagggtgacggggcacctgggggt
cgtagtcctcttctggaggaggcggtcctgtcggccatggtccccgtcatcagtacttcc
tgctcccggctgcagcccgcgctggcgggacagacggcgtcgagggcggtgtctctcttc
ctggatggagacgtttcctttttgcccgacaactccttcccctcacacatccggctgctg
aagaagcagcagggggacgcgtggagccagtctcagatggtgtgtctgctcatgggatgt
gtgtgttcgctccctcgcagcgtggaggtgcctcggatagacgagctgctgtcggagctg
gaggagatgagctgcacctgcagccacctgctgtctcacacctcggcagcaaagtgcttc
gccggcctggtgaataagcgagcgcacggtgattctctcgacagccgcattcagagcacg
atgacgagagtgtgtagtgagctggactctgcgtctccgtccgcacgcactcaggccttc
accctcgtgatctgggttgccaaggcgctgctgctcagataccacccgctgttcacaaca
ctgactgacaagctcttctcgctgctcgacgatgctgatctgggtcctctggcagccgac
ggcttctcgctgctgatgagcgactctgccgacatcctgaaccgcggctgccacgccgat
gttcgcatcatgtaccgccagcgattcttcagcgagaattcagccaagttggtcgagggc
ttcaacgcggcgccgcaagagaagaagcccaactacctgaaggctctgtctaacatcgtc
aataagctgcccaagcaggtgcaagtcactgaactaccagcgctgctgtcgctgctgttg
gaggccttgtcttgtcctgagctgggcgtccagctgtccaccctgtcctgtctgcagccc
gtcctcgtcgaccctccgccggcgctcatccagcagctggaggctctgatcaacaggctg
ctcgctctcacctgcagtccagcgatggacgtgaggatcgcttcaatccggtgcattcat
gccgtttcccgcttccctgaacatgagatcttgccggttcgggcccgagtgctgcgagct
ctggcccgacctctggacgacaagaagaggctggtgaggagcgaagcggtccacgcaaga
gcagattggttcctgttgggaagttga
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integrated database retrieval system
