KEGG   Cottoperca gobio: 115024258
Entry
115024258         CDS       T07513                                 
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
cgob  Cottoperca gobio
Pathway
cgob03266  Virion - Herpesvirus
cgob04081  Hormone signaling
cgob04145  Phagosome
cgob04148  Efferocytosis
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04517  IgSF CAM signaling
cgob04518  Integrin signaling
cgob04810  Regulation of actin cytoskeleton
cgob04820  Cytoskeleton in muscle cells
cgob05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    115024258
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    115024258
   04512 ECM-receptor interaction
    115024258
   04517 IgSF CAM signaling
    115024258
   04518 Integrin signaling
    115024258
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115024258
   04148 Efferocytosis
    115024258
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115024258
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115024258
   04810 Regulation of actin cytoskeleton
    115024258
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115024258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgob04131]
    115024258
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgob04147]
    115024258
   04515 Cell adhesion molecules [BR:cgob04515]
    115024258
   04090 CD molecules [BR:cgob04090]
    115024258
Membrane trafficking [BR:cgob04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115024258
Exosome [BR:cgob04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115024258
Cell adhesion molecules [BR:cgob04515]
 Integrins
  Integrin beta subunits
   115024258
CD molecules [BR:cgob04090]
 Proteins
  115024258
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_integrin EGF_2 EGF_TEN EGF_Teneurin
Other DBs
NCBI-GeneID: 115024258
NCBI-ProteinID: XP_029311547
Ensembl: ENSCGOG00000013021
UniProt: A0A6J2RQ07
LinkDB
Position
19:complement(12888074..12904280)
AA seq 795 aa
MGALPAQRILWMCVFILTGITEVCGSNVCTSRGASTCKQCLAVHPSCAWCFQEDFGQGVA
SSSRCDLKTNLMATGCALSSLESPNSKLQVIEDRPLSNKAAGATQDVTQIKPQKLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPKQAVKNPCYSINTTCLPQFGYKHVLSLTEEVSRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVQPNDGRC
HLNSDKMYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSKVELELQDVPEELSLSFNATCLNGELIPGLKSCSGLKIGD
TVSFSVEARARGCPKQKKKTFIIKPVGFKDSLSITVNFECDCKCQTKTQPDSPKCNHGNG
TFECGICLCHPGRLGPHCECAEGDYNPTEQDRCSGPEGSGGPHSAICSGRGDCVCGQCVC
HSSDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCM
SNLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLFDD
NTCSQICKDEIVLVDEIVLHDTNAVNCTYKDEDDCVERFQYYEDASGKSILFVVKDPDCP
KGPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgggtgctctgccggcgcaaaggatattatggatgtgtgttttcatcttgactggaata
actgaagtttgcggttcaaacgtctgcacctccagaggggccagcacatgcaagcaatgt
ctagctgtgcaccccagctgcgcgtggtgcttccaggaggactttggccagggggttgcc
agttcttcccgctgtgatctgaagactaacctgatggcaacgggctgcgctctttcatca
ctggagtctccaaacagcaaactgcaggtgatcgaggaccggcccctcagcaacaaggca
gcgggggccacgcaagacgtcacccagataaaaccccagaaactacacatcaccctcagg
ccagatgatgctaagcgcttcacagtgaaggtgcgtcaggtagaggactaccctgtggat
ctctactacctcatggatctctcctactccatgaacgatgacctcttccgcttgaggacg
cttggcaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttt
ggggcttttgtggacaagccgctctcaccttacatgtacatctcccccaagcaggctgtg
aagaacccctgctacagcattaacaccacctgcctgccccagtttggctacaaacacgtt
ctgtccctgacggaggaggtgagccgcttcaccgaggaagtgaagaagcagatggtgtcc
aggaaccgagacgccccagagggaggctttgatgccatcatccaggccgccgtgtgcaag
gagcagatcggttggcgtccaggtgcatcccaccttctgatcttcacctcggacgctaag
actcacgtggctctggacggtcgtctggctggaatcgtgcagcccaacgacggacggtgc
caccttaactctgacaaaatgtacagcatgtctaccaccatggattacccatctctagcg
ctgatcacagagaagatgtcggagaacaacatcaatctcatctttgctgtcaccaacccc
gtggttcctctgtaccagaactacagtgagctgattcctggcaccacagtaggaacactg
tccaacgactcgggcaatgttattcagctcattctgaaggcttacgctaaaatccgttcc
aaggtggagctggagcttcaagatgtcccggaggagctgtccctgtccttcaacgccacc
tgtctgaatggagagctcatccctggcctcaaatcctgctctggactcaagataggagac
acggtgtctttcagcgtggaggccagagctcgcggctgccccaaacagaagaagaaaacc
ttcatcattaagcctgtgggcttcaaggactccctctctatcaccgtcaattttgaatgc
gactgcaagtgccagaccaagacccagccagatagccccaaatgcaaccacggcaacggc
accttcgagtgtggcatctgcctgtgccacccgggtcgcttagggccgcactgcgagtgt
gcagagggtgactataaccccacagagcaggaccgctgcagcggacccgaaggctctgga
ggacctcattctgccatctgcagcgggcgaggagactgtgtgtgcggccagtgtgtgtgt
cacagcagtgactttggaaaagtctggggaaagctgtgtgagtgtgatgacttcaactgc
ctgcgctacaaaggggaactgtgctcaggccatggcgtctgtaactgtggcttctgccag
tgtgcaccagactggcagggggagaactgtaactgctccagacgtactgacacctgtatg
tccaacctgggcttgttgtgcagcgggaggggccagtgtgtgtgcggggcctgtgagtgc
acccagcccggtgcctacggagccacgtgtgacaagtgccccacgtgccctgacgcctgc
accatgaagaaggagtgtgtggagtgtaaacacttcaagaggggcaagctgtttgatgac
aacacctgctctcaaatctgcaaggatgagattgtgcttgtggatgaaatagtgctccat
gatacgaatgctgtgaactgcacctacaaagatgaggatgattgcgtggagcgtttccag
tactatgaggacgccagtggaaagtccatcttgtttgtcgtcaaagacccagactgccct
aagggtccagacattttagtggtgcttctgtcggtggcaggagccatcttgttcctcggc
ttggcggctttgcttatctggaaactcctggtcaccattcacgacagacgggagtttgcg
aaatttgaagaagaacgcgctcgtgccaagtgggacacgggacacaatcctctctacaaa
ggagccacatctaccttcacaaatatcacatacagaggaaaagactga

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