Cottoperca gobio: 115024267
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Entry
115024267 CDS
T07513
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cgob
Cottoperca gobio
Pathway
cgob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115024267 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115024267 (msh2)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115024267 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
115024267
NCBI-ProteinID:
XP_029311564
Ensembl:
ENSCGOG00000008128
UniProt:
A0A6J2RNG5
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All DBs
Position
19:9966162..9976887
Genome browser
AA seq
935 aa
AA seq
DB search
MAVQPKHNLSMDSAAEHGFLSFIFSMPEKPETTFRIFDRNDFYTVHGKDAIFAAKEVFKT
NGVIKFLGSGSRKLESVVLSKLNFEAFVKDLLLVRQYRVEVYKNHSKSSKEHDWKIEYKA
SPGNLTQFEEILFGSGTGAVGCAGVVAVRFATGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAHGEGNTDGNKLREVVERGGVLVSERKRAEFSSKDMVQDL
NRLLRAKKGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESHFNSFSLTALDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSHVPALVTAL
ERYSGRYEVLLEAVFLSPLRDLNADFVKYQEMIETTLDMNQIGHHEFLVKASFDPVLSEL
REKMDALEKSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFST
LDVQKNGVRFTNGKLSSLNEEYTKNREEYEEAQNAIVKEIINIASGYVDPLQTLSDAIAQ
LDAVASFAVVSVSAPVPYVRPRLLADGCRRMELQQARHPCMETDADTAFIPNDITFVQGE
KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSVMARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCLFA
THFHELTALAAQQSTVHNLHVTALTSHNTLTMLYRVKSGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPAGERSEQEEEPEAKRRRTDKQVGESLIQDFLEKAKSLSTATMSE
EEVKAALMKMKAQLRSKNNTYITEILSRCVPAKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacacaacctgtctatggatagtgcagccgagcatggctttctg
agctttattttctccatgccagaaaaaccggaaactactttcagaatatttgaccgcaat
gacttctacactgtccacggaaaagacgccatattcgcggcgaaggaagttttcaagact
aatggggtcatcaaatttttgggctcagggagtcgcaagctggagagcgtggtcctgagc
aagctgaactttgaggcctttgtgaaagacttgctgctggtgaggcagtacagagtggaa
gtgtacaagaaccacagcaagagcagcaaagagcacgactggaagattgagtacaaggcc
tctccaggaaacttgactcagtttgaggagattctgtttggtagtggaaccggtgcagtg
ggttgtgcgggagttgtagccgtgcggtttgctacaggagctgatggacagcgagtggtc
ggggtcggctatgtggacgccgcccagaggacgatgggggtgtgtgagtttccggacaac
gagatcttctccaacctggagtcccttcttgtccaaatcagccccaaagagtgtctcttg
gcccatggtgaaggcaacaccgacggcaataaactacgggaggtggtagagcgtggcggc
gtactggtctctgaaaggaagagagcagagtttagtagcaaggacatggtccaggatctc
aacaggctgctgagggccaagaaaggagagactgtggcgagcaacacgctgcctgagctg
gacaaacaggtggctatgtcgtgcttggccgcagtggtgcgtttccttgaactgctctct
gatgagtcccacttcaactctttcagtctgactgctctggacctgggtcagtacatgagg
ctagacaacgctgccgtgagggctcttaacctcttccagggatcacctgatgacaccagt
ggagctcattcattggccggtctgttgaacaagtgccgtacgccgcagggtcagcggctg
gttaaccagtggatcaaacaaccactcatggacaaaaccaaaatagaggaaaggctagac
ctggtagagagcttcgtgtgtgactctgagctcaggcagacttgtcaggaggacttgctg
cggcggtttccggatcttcaccgcctggccaagaagttccaccgtcactctgcgacgctg
caggactgctaccgcgtctaccaggctgtgagccacgtccctgccctcgtcacagccctg
gagagatactcaggtcgctacgaggttctgttggaggcggtgttcctctctcctctcaga
gatctgaacgctgactttgttaaataccaggagatgattgaaaccacactggacatgaac
cagattggccaccatgagttcctggtgaaggcgtcattcgatccagtgttgagtgagctg
agagaaaagatggacgcgctggagaagagcatgcaggcagtgctgaacagtgccgccaga
gaactaggtctggacgctggtaagactgtgaagttggagtccaacgccatgctgggtttt
tacctgcgagtcacctgcaaggaggagaagagtctgaggaacaacaagaaattcagcacg
ctggatgttcagaagaacggagtgcgcttcacaaacggtaagctgagctctctaaatgag
gagtacaccaagaaccgggaggagtacgaggaggcccagaatgcaattgtcaaggagatc
atcaacatcgcctcaggttacgtggatcccctccagacgctgagcgacgccatagcgcag
ctggacgctgtggcgagttttgctgtggtgtccgtctccgcccctgtgccgtatgttcgg
ccccggctgttggcggacggatgccgccgtatggagctgcagcaggccagacatccctgc
atggagactgacgcggacaccgccttcatacccaacgacatcaccttcgtccagggagag
aagaacttctacattataacaggaccaaatatgggcggcaagtcaacgtttattcgtcag
gtcggtgtgatcgctctgatggctcagatcggctgctttgtgccgtgcgagaaggcagag
cttagcgtgattgacagcgtcatggccagggtgggagcgggagatagccaggtcaaagga
gtgtccacctttatgtccgagatgctggagacggctgccatcctgcgctcggccacagag
aactctctcattataatcgacgagctgggaagaggcacgtccacatacgacggattcggt
ctggcatgggccatcagcgaacacattgcctccaaaatcagctgcttctgtctgttcgcc
actcacttccacgaactgacggcactggcagcgcagcagtccacggtccacaacctgcac
gtcacagccctgacctcccacaacacactgaccatgctgtacagagtcaaatcaggtgtg
tgtgaccagagttttggaatccatgttgccgagttggcgtgcttcccgccatcggtggtc
gccatggctaaggaaaaggcggaggaactggaggagttccaggaacctgcaggggagagg
tcggagcaggaggaagaacccgaggccaagaggcgacggacagacaaacaagtgggagaa
agcctgattcaggacttcctggagaaggcgaagtcactctctactgccactatgagtgaa
gaagaggtgaaggcggcgctcatgaaaatgaaggcacagcttcgctccaaaaacaacact
tatatcacagagatcctgtcccgctgtgttcctgcaaaaacagcttga
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