Cottoperca gobio: 115024291
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Entry
115024291 CDS
T07513
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115024291 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115024291 (smarcd2)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115024291 (smarcd2)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115024291 (smarcd2)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115024291 (smarcd2)
PBAF complex
115024291 (smarcd2)
GBAF(ncBAF) complex
115024291 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115024291
NCBI-ProteinID:
XP_029311608
Ensembl:
ENSCGOG00000018497
UniProt:
A0A6J2RL09
LinkDB
All DBs
Position
19:complement(14085700..14094680)
Genome browser
AA seq
502 aa
AA seq
DB search
MASRGGGFTQMNLNLNPMNVGHAAGMRMAGMPQPPAGYSRSMNNAPQYPQRTGMPSSRVG
GPMGSMGGQLPGPSYGGGNMSMRQGMGPSGMDASRKRFLHLHQQQQQEALGGLRRGAKRR
KMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYI
SNTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAS
IMQALWLYIKNNKLQDCHEKEFINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPIIIN
HMISSVDPNDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEVKIHETIEYINQ
LKTERDFMLSFSNKPQDFIQDWLKSQCRDLKLMTDVTGNPEQERRTEFYQEPWVPEAVGR
YVYSRVQQRRQDLEQVLGIRLN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagaggaggaggattcacccagatgaatctgaatttgaaccccatgaatgtg
gggcatgctgcgggtatgaggatggcaggtatgccccaacctccggcgggatactcccgg
agcatgaacaacgctccccagtacccccagcgcacagggatgccatccagcagagttggg
ggtcccatggggtcaatggggggtcagctgcctggtccttcttacggtggtgggaacatg
tccatgcggcaaggcatggggccttcaggaatggacgcctcgaggaaacgcttccttcat
ctgcatcaacagcagcagcaagaagcgctgggaggcctaagacgaggagcaaaaagacgc
aagatggctgacaaggttctcccacagaggatccgagacctggtcccagagtcccaggcc
tacatggatctcttggcctttgagaggaaactggatcagaccatcgcccgaaagcgtatg
gagattcaggaagccatcaagaagcccattatgcaaaaacgcaagctcaggatctacatt
tctaacacgtacactcccagcaagccggagggcgaggaggccgagaaggtgtcctcctgg
gaactgagagtggagggaaaacttctggaggaacctggcaagcagaagaggaagttctca
tctttcttcaaaagcctggtgattgagcttgataaggagctctatggaccagacaaccac
ttagtagagtggcacagaatgcccaccactcaggagacggatggtttccaggtcaaaagg
cccggcgacttgaatgttaagtgcaccctcctgctcatgctcgaccaccagccccctcag
tacaaactggacccccggctggctcgtctgctgggcgtgcacacgcagacacgggccagc
atcatgcaagccctttggctctacatcaaaaacaacaagctgcaggattgtcacgagaag
gagttcatcaactgcaaccgctatttcagacagatcttcggctgtccccgcatgaggttc
tctgagattcccatgaagctggcgggcctgctgcagcaccctgaccccatcattatcaat
cacatgattagcagtgtggaccccaacgatcagaagaagacggcgtgctatgacatcgat
gtggaggtggacgacccactgaagggccagatgaacagcttcctgtcctccacaaccaac
caacaggaaattgctgcgctggaggtgaagattcatgagacgattgaatacatcaaccag
ctgaagaccgagcgagacttcatgctgagcttcagcaataaaccgcaggacttcatccaa
gactggctcaagtctcagtgcagagatctgaagctgatgacggatgtgacgggaaaccca
gagcaggagcggaggactgagttctaccaggagccctgggtaccagaggcagtgggcaga
tacgtttactccagggtgcagcagagaagacaagacttggagcaagtgttgggaatccga
ctcaactga
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