Cottoperca gobio: 115024340
Help
Entry
115024340 CDS
T07513
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgob01002
]
115024340 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115024340 (usp42)
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115024340 (usp42)
Peptidases and inhibitors [BR:
cgob01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115024340 (usp42)
Ubiquitin system [BR:
cgob04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115024340 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
115024340
NCBI-ProteinID:
XP_029311670
UniProt:
A0A6J2RQT5
LinkDB
All DBs
Position
19:complement(16898526..16910290)
Genome browser
AA seq
1231 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAMGPTMPSDSPRMKAAGGCLGP
TPGAAVYNSTASSVDRPKEQVISSGDGIDSPQKVLFPPERLTLKWNQTHRIGAGLQNMGN
TCFLNSALQCLTYTPPFANYLLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGAKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEYLDLQPCMSQSQGEPQVYGLFAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSSDGKKAG
DYSHMNHNPGIPGQSSPRPVVIPRINTTVHHNNNNNNNIGFIGPQLPPHMTKRTLHVNGN
GSLRDYPTNSNSKPSTSTSSGVLGKPSHGLASSSSSSISHSISRPTMIPDHDKRQKLSFF
IGQGKLNRPSSSSSSYSQPSSASCSSSSSSSSSSSSSSSSSSSLSSSQSTSDVRFVPRQL
NHVNGVSRSNGDHHTGGNGASFLVPYGQESSEESDQENCGTLDNGGLTKSHLNGNMRTGD
NSTQTTNGDSGVHHNGNGLNGPTNGVSKSSQNGLHNGHHKVNGHNTPNKLSGSNHDTSSP
VATVVANGLDSDHSPTSKETHTSASSQATSSQSIHRASESQPISTPDTRAQTVSEPLPQH
TASSAVSAPPPANATKTHSVTSREPASSSAQHGKPAALSTPTDASQSTNGASVAPQVSRG
EGEAKDLPQTSDPSAGTEARTDAKEQTQSKPSSRGNERQTSRDREKDRLYSDWSRDKDKH
YRDRSQERESDGDRHRHRRDSRDPYQHQRSHRDRLSPHNRSSRDWDSERRRERPLHHPRE
RDRDRCSNHYHHYHHYSSREDWDRERRGHGDPYREESHNRGRWQQESRESRSMKDKSNGR
EREYDSSKEETSSPNTEPETSEKSKGSPPRARLATCESAPNREDQNHKRTADPPSKERED
SSEARRSKKHKKSKKKKKSKDKDRHRESGSSEVDSDRATDPKKKKKKKRRRQRDSEAEQQ
SPGAARIHKNRSSEERESRKRRYYDIKDAKHDNISLPEKRRRTDDADDHLLPSNPTPPPN
GPTHHHLNGYKGNGYSHTNGDSHGFCSGLKH
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacgagtcagtcgggtgtaagcga
tctccctttaccagtggagacgtggggatggatggcagctgttccagcagctgggcaatg
ggtcccaccatgccgagcgactctccgaggatgaaggctgctggaggctgcctgggcccc
acgcctggagctgcagtctacaacagtacagcctcctctgtggaccggcccaaggagcaa
gtgataagcagtggtgatggcattgactcgccccagaaggtcctcttccctccagagcgc
ctcaccctaaagtggaaccagactcaccgcattggtgcaggcctgcagaacatggggaac
acctgcttcctcaactcagccctgcagtgtctcacctacaccccgccgtttgccaactac
ttgctgacacgggagcactccaaaacatgtcacgagccaggattctgtatgatgtgcacc
atgcaaaaccacatcattcaggtttttgcaaactctgggaatgtcattaagcccattggt
gtgctcaatgagctcaaaaggattgctaagcacttccgctatggaagccaggaggatgcc
catgagttcctgcggtacacagtggacgctatgcaaaagtcctgcttacctggagccaaa
ttggacaggcaaacacaggcaaccactttcatccatcaagtatttggcgggtacctacgg
tccagagttaaatgtttaaactgcaaagcagtctccgatacatttgatccgtttctggac
ataactctggaaattaagacggctcccagtgtctctaaggctctggagcagtttgtgaag
ccagaacagctggacggagaaaatgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagatttaccatccaccgcagctccaacgtgctcaccctctcgctcaaacgc
tttgcaaacttcagtggaggcaaaatcaccaaggatgtgaaatatccagagtacctggac
ctgcagccctgcatgtcccagtctcaaggggagccccaggtctacgggctgtttgctgtg
ctggtccactctgggttcagctgtcatgctggacactacttctgctatattaaggcaagc
aatgggcagtggtatcagatgaacgactcctccgtgtccgtcagtgacatcaggtctgtt
ctcaaccagcaggcctatgtcctgttctacatcaagtccagtgacgggaagaaagcagga
gactacagccacatgaaccataaccccggcatccctggtcagtcgtctccacggccggtg
gtgataccgcgcatcaacaccaccgtacaccacaacaacaacaacaacaacaacattggc
ttcataggtccccagctgccaccacacatgaccaagcgcactctccatgttaatgggaat
ggatctctgagggactatcccaccaactccaactccaagcccagcaccagcaccagcagc
ggtgttttgggaaaacctagccatggactggcctcttcttcctcttcttccatctcccac
tcaatcagccggcccacaatgatcccagaccacgacaagcgccagaagctttcattcttc
attggacaaggcaaactgaaccgcccgtcttcctcctcgtcctcgtacagccagccgtcc
tctgccagctgcagcagcagcagtagcagcagcagcagcagcagcagcagcagctcctcc
tccagctctttatcctcctcgcagtctacctcagacgttcgctttgttccacgtcagctt
aaccacgttaacggcgtgtctcgcagtaacggggaccaccacacaggaggaaacggagcg
tcattcttggtgccgtacggccaagagtcttcagaggaatcagaccaggagaactgtggc
actctggataacggtggtttaaccaagtctcaccttaatggaaacatgagaacgggtgat
aactctactcaaactaccaacggagattcgggagtgcaccacaacggtaacggattaaat
ggaccaactaatggcgtctctaaatccagtcaaaatgggctccataatggacaccacaaa
gtgaatggacacaacacccctaataaactctctggcagtaatcacgacacttcatcccct
gtggccactgttgttgctaatggacttgacagtgaccatagtccaacaagcaaagagaca
cacacttctgcctcatcccaagccacttcttctcagagcatccatcgagccagtgaaagc
cagcccatctccactcctgacacaagggctcaaacggtgtctgaacccctgcctcagcat
acagcgtcctccgctgtcagcgctccacctccagctaatgctacaaagacccattctgtc
acatccagagaaccggcttcctcttctgcccagcacggcaaacctgcggccttatccacc
ccgacagacgcctcccaaagtaccaatggagcctcggtagctccacaggtcagcagaggt
gagggagaagcaaaggatctaccgcagaccagtgatccatcagcagggacggaagcgcgc
acagatgctaaggagcaaactcagtccaagcccagttctagaggtaatgaaagacaaact
tcccgagacagggagaaagacagactgtattctgactggagcagagacaaggacaaacac
tacagggacaggagtcaggagcgagaaagtgacggtgatcgacatcggcacagacgagac
tcccgagatccctaccaacaccagcgctcacacagggatcgtttgtctcctcacaatcgt
tccagcagggactgggactctgagcgtcgcagagagcggcccctccatcatcccagggag
cgtgatcgtgacagatgctctaaccattaccaccactatcaccattacagctccagagag
gactgggaccgtgagcggaggggacacggtgatccctaccgcgaggagtctcataaccgc
gggaggtggcagcaggagagtcgagagtcccggtcgatgaaagacaagagcaacggcagg
gagagagaatatgactcatcaaaagaggagacttcctcgcctaacacggagccagaaacc
tcagaaaagtccaagggctcaccccctcgggctcgtctcgccacgtgtgaatccgctcca
aacagagaggatcagaatcacaagaggactgctgatcctccaagcaaggagagggaggac
agctctgaggctcggcgctctaaaaaacacaaaaagagcaagaaaaagaagaagtcaaag
gataaagacagacaccgtgagagcggaagctccgaagtggattcagacagagccactgac
ccaaaaaagaagaagaagaagaaaaggaggcggcagcgggacagcgaggccgagcaacaa
agcccaggagcagctcgcatccacaaaaacagaagcagcgaggagagagagagccgcaag
cgacgttactatgacatcaaggacgctaaacatgacaatatttctttgccagaaaaacgc
cggcgcacagacgacgctgatgaccatctactcccctctaaccccaccccacccccaaac
ggcccaactcaccaccatctcaacggatacaaaggaaatggttacagccacaccaatggc
gactcccacggattctgcagtggcttgaaacactga
DBGET
integrated database retrieval system
