Cottoperca gobio: 115024342
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Entry
115024342 CDS
T07513
Symbol
pms2
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cgob
Cottoperca gobio
Pathway
cgob03430
Mismatch repair
cgob03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115024342 (pms2)
03460 Fanconi anemia pathway
115024342 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115024342 (pms2)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115024342 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115024342
NCBI-ProteinID:
XP_029311677
UniProt:
A0A6J2RQG2
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Position
19:16920186..16925588
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AA seq
872 aa
AA seq
DB search
MHTVPNIARGHRFRYVLVMTYFRVSAFQLLKMSDACTSEPAGAIKAIDKQSVHQICSGQV
VLTLATAVKELVENSIDAGATNVDVRLKECGAELVEVSDNGKGVEEANFEGLTLKHHTSK
LRDFSDLIHVETFGFRGEALSSLCALSVLSVVTCHESSQVGTKLVFDHKGHLVQQSPHPR
QQGTTVSLQQLFYTLPVRYKEFQRNIKKEYAKMLHILQSYCIISVGVRITCSNQNGQGKR
STVLSTSGSQSMRDNIGAIYGPKQLQSLLPFQQVSPAETVIEEYGLQDAELPKQLFSMTG
FVSRGDHGVGRSATDRQFFFINNRPCDPVKVTKLVNEVYHMYNRHQYPFVALNIAVASEC
VDVNVTPDKRQIFLQEEKLLLAILKSSLVNMYEAGVNKISMNYTLKPSIKTDMCQDVPSN
ENMPEPGGDVEHATRCSKSSLNLAGLKAAFSSYHNSGNKSSGGKAANGGPTQKTLQSFFK
DTVKPPTCNPSAASPLKATRDDAKRSPAGKSVLDGFRYGKMSCSEADSEEDSSVSSRDVA
VPEFSSPETVGVTNETVEATSDSVHTAPELSQTEPCTSNEDCPMSPDAKRARKEEPHSPA
EHESNAFSNSSLAVDAPVCRQKRTVALQFSLQELAGKVKRLQDLQKQRAGDDLLYRRFRA
KINPGENQSAEEELKKEISKDMFKEMEIIGQFNLGFIITKLNSDVFMIDQHASDEKYNFE
MLQQHTVLQGQKLIVPQKLHLTAVSENVLMENIEIFRKNGFEFLVDEDAQVMERVKLVSL
PTSKNWTFGPADIEELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSVSEMKKL
LVHMGEIEQPWNCPHGRPTMRHLANLDIISQD
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcacacggtccctaacatcgcgagaggtcacagattccggtacgttttggtgatgaca
tacttcagagtttcagcttttcagctcttgaagatgtctgatgcttgcacctctgaacct
gcaggagccatcaaggccattgacaaacaatcagtgcatcaaatctgctcaggacaggta
gtgctgactttggccactgctgtcaaagagctggtggaaaacagcatcgatgcaggggcc
accaacgttgatgtcaggctgaaggagtgtggagctgaactagtggaagtgtcagacaat
ggcaaaggagtagaagaggccaactttgaaggactgacgttgaagcatcacacgtcaaag
ctgagagatttctctgatcttattcatgtggaaacatttggcttcagaggtgaagccctc
agctctttatgtgctctgagtgtcctgagtgtggtgacatgccacgagtccagccaggtg
gggaccaagctggtgtttgaccacaaaggccacctagtccagcagtcacctcacccccgg
cagcaaggcaccacagtcagcctgcagcagctcttctacactctgcctgttcgatacaag
gagttccagcgcaatattaagaaggagtatgcgaaaatgctacacatactgcagtcctac
tgtatcatctctgtaggagtgcgtattacctgctccaaccaaaatggccaaggaaagcgc
agcacagtcctcagcaccagtggcagccagagtatgagagacaacatcggggccatatat
ggaccaaaacagctccagagtcttctgccttttcagcaagtgtctcctgcagaaactgtc
attgaagaatacggactccaagatgcagagctacccaaacagctcttttccatgacaggg
tttgtgtcacgaggagaccatggtgttgggaggagtgcgacagacaggcagttctttttc
attaacaaccgaccgtgtgatcctgttaaggtgaccaaacttgtgaatgaagtgtatcac
atgtacaaccggcatcaatacccgtttgtcgccttgaacatagccgttgcctcggagtgt
gtggacgtgaacgtaactccagacaaacgacagattttccttcaggaggagaaactcttg
ttggctattctgaagtcgtctctcgtcaacatgtatgaggcgggagtcaataagatcagc
atgaactatacactcaaacccagcatcaagactgacatgtgtcaggatgtcccgtcaaat
gagaacatgccagaacctggaggggacgtggaacatgcgactcgctgctcaaagtcgtcc
ctgaacctggccggcctaaaagctgctttttcaagctatcacaactctgggaacaagtca
agcgggggaaaagctgccaacggtggcccgacacaaaaaacactgcagtctttttttaag
gacacagtcaaacctccaacgtgcaacccgagtgcagcatctcctttaaaagccacaaga
gatgacgctaaacgctccccagcgggaaagtctgtgctggatgggtttaggtacggaaag
atgtcgtgcagcgaagcagactctgaagaagacagcagcgtgtccagtcgtgacgtcgcc
gtgccagagttcagttctccggagactgtcggcgttacaaacgaaacagtcgaagcaacg
tcagacagcgttcacactgctcctgaactctcgcagactgagccatgcacgtccaatgag
gactgtcctatgagcccagatgccaagagggccaggaaagaggaaccccattccccagca
gaacacgagtccaacgctttttcaaactcttccttggcggtggatgctccagtctgccga
cagaagaggacggtggccctccagttctctttacaagagctggcggggaaggtgaagagg
ttacaggacctgcagaagcagagggccggtgatgatctgctctatcgacgcttcagggcc
aagatcaaccccggagaaaaccaaagtgcggaggaagagctcaagaaagagatcagtaaa
gacatgttcaaagagatggagatcatcggtcagtttaacctcggcttcattatcaccaaa
ctcaactcggacgtcttcatgattgaccagcacgcctcggatgagaaatacaactttgag
atgctgcagcagcacactgtgctccaaggacagaaactcatcgtccctcagaagcttcac
ctcactgctgtcagcgaaaatgttctcatggagaacattgagattttcagaaagaacggc
tttgaatttctggtcgatgaggacgctcaggtgatggagagggtgaagctggtgtccctg
cccaccagcaagaactggacattcggcccagccgacattgaagagctgatcttcatgttg
agtgacagcccgggggtcatgtgtcgaccgtcccgcgtcaggcagatgtttgcctcccga
gcttgtcgaaaatcagtgatgattggcactgctctgagtgtcagtgagatgaagaagctc
ctggttcacatgggggagattgagcaaccatggaactgtcctcatggcaggcccaccatg
agacacctcgccaacctggacatcatctcgcaagactga
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