Cottoperca gobio: 115024512 Help Entry 115024512         CDS       T07513                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06236   collagen type I alpha Organism cgob  Cottoperca gobio Pathway cgob04510   Focal adhesion cgob04512   ECM-receptor interaction cgob04518   Integrin signaling cgob04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cgob00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115024512    04518 Integrin signaling     115024512  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115024512   09142 Cell motility    04820 Cytoskeleton in muscle cells     115024512  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cgob00536]     115024512 Glycosaminoglycan binding proteins [BR:cgob00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115024512 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd TILa Motif Other DBs NCBI-GeneID:  115024512 NCBI-ProteinID:  XP_029312017 Ensembl:  ENSCGOG00000009581 UniProt:  A0A6J2RRG5 LinkDB All DBs Position 19:7921623..7940106 Genome browser AA seq 1449 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDSTFGSCSLDGQLYNDKDVWKPEPCQICVCDSGT VMCDEVICEDTSDCADPIIPDGECCPICPDVDGPQQPEQPGEKGEVGPNGDTGAIGPPGN DGLDGQPGRTGPPGPPGPPGLGGNFSPQMGYVDHSKSSGPPVPGPMGPMGPRGPPGPPGS SGPQGFNGPSGEPGEPGASGAMGPRGAAGPLGKNGDDGEPGKAGRPGERGAAGPQGARGF PGTPGLPGIKGHRGFSGLDGSKGEGGPAGPKGEGGVSGENGIPGAMGSRGLPGERGRPGA PGPSGARGNDGNSGAAGPPGPTGPAGSPGFPGGAGAKGETGVPGGRGNEGPQGARGESGN PGPSGSAGAAGAAGSDGSAGAKGSPGAVGIAGAPGFPGSRGPSGAQGAVGAPGSKGNNGD HGLPGPKGEPGAKGESGPAGVQGLPGSSGEEGKRGGRGEPGGAGARGPPGERGSPGARGF PGADGTAGGKGGPGERGANGAVGAQGATGESGSSGGPGAPGPKGMAGSPGSPGPDGKPGP AGAAGQIGRSGPAGANGARGQPGVMGFPGPKGVNGEGGKPGERGPGGAIGAVGAAGKDGD VGAPGPSGIAGPAGEKGEQGPAGSGGFQGLPGPQGATGETGKPGEQGAGGEAGPHGPSGP RGDRGFPGERGATGVVGPIGSRGAPGSAGSDGAKGEAGAGGAPGGQGSPGMQGMPGERGS GGLSGLKGERGEAGGKGADGVAGKDGGRGMTGAIGVPGPPGAQGEKGEGGAVGVAGPTGP RGSSGERGENGPSGPAGFAGSPGADGQPGAKGESGDSGPKGDAGAPGPGGPVGGSGPQGP SGPAGPKGARGGAGSPGATGFPGPAGRVGPSGPSGAGGPPGPNGPVGKDGIRGGRGEPGP AGRPGESGASGPAGLTGEKGSPGSDGAPGTSGISGPQGIAGQRGMVGLPGQRGERGFSGL PGTSGEPGKQGPSGLHGERGLPGPAGPPGLSGASGEAGREGSTGNDGSSGRDGAAGPKGD RGESGMSGPPGPPGAPGAPGAVGSSGKGGDRGESGPAGSAGPGGPAGVRGPAGPAGLKGD RGEAGEAGDRGHKGHRGFTGMQGLPGQSGTSGERGPAGASGPAGPRGPSGSNGSPGKDGM NGLPGPIGPPGPRGRNGEMGPSGPPGVPGPAGPPGPPGSGFDFISQPIQEKAPDPFRGGH YRADDPKVMQDRDMEVDTTLKTLTQKVEKIRSPDGTQKSPVRMCRDLKMAHPEWKSNMYW VDPNQGSTLDAIKVHCNMETGETCVYPSESSIPMKNWYLSKNIREKKHVWFSESMTGGFQ FQYGSNGADSEDVSIQMTFMRLMSNQASQNMTYHCKNSIAYMDSATGNLKKALLLQGTND VEIRAEGNSRFTYSVSEDGCTSHTGTWGKTVIDYKTSKTSRLPIIDIAPMDVGAPDQEFG VEVGPVCFL NT seq 4350 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagcgctgttgctcagcgcaacagtacttttggca agaggtcaaggcgaggatgatagcacatttggcagctgctcattagacggacagttgtac aacgacaaggatgtatggaaaccagagccctgccagatctgcgtctgcgacagtggaacc gtcatgtgcgacgaggtgatctgtgaggacacatccgactgcgctgatcccatcatccca gacggagagtgctgccctatctgccccgacgtcgatggaccccagcaaccagaacagcca ggagagaagggagaagttggccccaatggagacacgggtgctattggtccccctggcaac gatggactggatggccagcctggtcgtaccggccctcccggcccccccggcccccctggc cttggcggaaacttctctcctcagatggggtatgttgaccactccaaatccagtggccca cctgtccctggcccaatgggccccatgggtcctcgtggtcctcctggaccccctggctcc tctggtcctcagggtttcaatggcccctccggagagcccggtgagcccggagcttctggt gccatgggtccccgtggtgccgctggaccccttggaaagaacggagatgatggtgagcct ggcaaagctggtcgccccggtgagcgtggagccgctggccctcagggtgctcgtggattc cccggaacccccggactccccggcatcaagggacacagaggattcagcggtctggatgga tctaagggagagggtggacccgctggccccaagggagagggtggtgtatctggtgagaac ggtatccccggcgccatgggttcacgtggtcttcctggtgagagaggccgccctggagct cctggcccttctggtgctcgtggtaatgatggcaacagtggtgctgctggaccccctgga cctaccggacccgctggttccccaggtttccccggtggtgctggagctaagggagagact ggtgttccaggaggacgtggaaatgagggaccccaaggagcccgtggtgagtctggtaac ccaggaccttctggatccgctggagctgctggtgccgccggaagcgatggctcagctggt gctaagggttctcctggtgctgttggtattgctggtgctcctggtttccccggatctcgt ggtccttctggagctcagggagctgtcggtgctcccggttccaagggaaacaacggtgac cacggtcttcctggtcctaaaggagagcctggtgccaagggagagtctggccccgctgga gttcagggacttcctggctcctctggtgaggaaggcaagagaggaggccgtggagagccc ggcggtgctggagcccgtggaccccctggagagcgtggttcccctggtgctcgtggtttc cctggtgctgatggaactgctggtggaaagggaggccctggtgagcgtggcgccaacggt gcagtgggagctcagggagccactggtgagtctggaagctccggtggtcctggcgcacct ggacccaagggtatggctggtagccccggaagccccggtcctgatggaaaacctggacct gctggagccgctggacaaattggacgctctggacctgctggcgctaacggagccagagga cagcctggagttatgggattccccggacccaagggagttaatggtgagggtggtaagccc ggtgagagaggacccggtggtgctattggtgctgttggtgctgctggcaaagacggtgac gttggtgctcctggaccttctggtatcgctggacctgctggagagaagggagagcaggga cctgctggttccggtgggttccagggtcttcccggaccccaaggtgctactggtgagact ggcaagcctggtgagcagggtgctggtggtgaggctggaccccatggcccatctggacca agaggcgacagaggattccccggtgagcgcggtgccaccggcgttgttggcccaattgga agccgtggtgctcctggctctgctggtagcgatggagccaagggagaggctggtgctggt ggtgcccccggtggtcagggatcccccggtatgcagggaatgcccggtgagcgtggatct ggtggtctgtccggtctcaagggagagagaggtgaggctggaggcaagggagctgatggt gttgccggcaaagatggcgggcgtggtatgaccggtgctattggagttcctggaccccct ggtgctcagggtgagaagggtgagggtggagctgttggagttgctggacccaccggtcct cgtggttcctctggcgagcgtggagagaacggaccttctggacctgctggattcgctgga tctcctggtgctgatggtcagcccggtgccaagggagagagtggtgactctggacccaag ggagacgctggtgctcctggacccggtggacctgttggaggttctggacctcagggacct tctggacccgctggacctaaaggtgctcgtggtggtgctggatcccctggtgctactggt ttccccggacctgccggcagagttggaccctctggcccatctggagctggtggacccccc ggacctaatggacccgttggcaaagatggaataagaggaggtcgtggtgagcctggtcca gctggtcgccccggtgagagtggtgctagtggacccgcaggacttactggagagaaagga tctcctggttctgatggagcccctggtacctctggtatatccggacctcaaggtattgct ggacagcgtggtatggtcggtctccctggacagcgtggagagcgtggtttctctggtctg cctggaacatctggcgagcctggaaagcagggaccttctggacttcatggtgagcgtgga ctccctggacctgctggaccccctggactgtccggtgcttccggagaggctggtcgtgag ggatccaccggtaacgatggttcctctggtcgcgacggagctgccggccccaagggagac cgtggtgagtctggtatgtctggaccccccggaccccctggtgctcctggagcccccgga gctgtcggttcctctggcaaaggtggtgatcgtggagagtctggtcccgctggttctgcc ggccctggtggccctgctggtgtccgtggacccgctggccctgctggtttaaagggagac agaggagaggctggtgaggctggagacagaggacacaagggacacagaggattcaccggc atgcagggtctgcccggccaatctggaacttctggagagagaggacctgctggtgcttct ggacccgctggacccagaggaccttctggatctaatggctcccctggtaaggatggcatg aacggtctgcccggacccatcggaccccctggacctcgtggtcgcaatggagagatggga ccttccggtcctccaggagttcccggacccgctggaccccccggacctcccggcagtgga ttcgacttcatcagccagcccattcaggagaaggcacccgatcccttccgtggcggccac taccgcgctgacgaccccaaagtgatgcaagatcgcgacatggaggtcgacaccaccctc aagaccctgactcagaaggttgagaagatccgcagccccgacggtacccagaagagccca gtccgcatgtgccgtgacctcaagatggcccaccctgagtggaagagcaacatgtactgg gttgaccccaaccagggatccactttggatgccatcaaggtccactgcaacatggagact ggcgagacttgcgtctaccccagcgagtccagcatccccatgaagaactggtacctcagc aagaacatcagagagaagaagcacgtctggttcagcgagtccatgacaggtggattccag ttccagtatggcagcaatggagctgattccgaggatgtcagcatccagatgaccttcatg cgcctgatgtccaaccaggcatctcagaacatgacataccactgcaagaacagcattgcc tacatggactccgccaccggcaacctgaagaaggccctgcttctccagggaaccaacgat gttgagatcagagccgagggcaacagccgcttcacatacagcgtcagcgaggatggctgc acgtcacacactggcacatggggcaagacagtcatcgactacaagacatcaaaaacatcc cgcctgcccatcattgacattgctcctatggatgttggtgcacctgatcaggaatttggc gtcgaagttggccccgtttgcttcttgtaa

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