KEGG   Cottoperca gobio: 115024523
Entry
115024523         CDS       T07513                                 
Symbol
ift140
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
cgob  Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cgob03037]
    115024523 (ift140)
Cilium and associated proteins [BR:cgob03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   115024523 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML ANAPC4_WD40 TPR_IFT80_172 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WDR55 WD40_Prp19 TPR_COPA_B TPR_GEMI5 Clathrin Beta-prop_WDR35_TULP_N Beta-prop_CAF1B_HIR1 Beta-prop_ELP1_2nd RNase_HII WD40_MABP1-WDR62_1st TPR_12 Consortin_N DUF6120 TPR_2
Other DBs
NCBI-GeneID: 115024523
NCBI-ProteinID: XP_029312046
Ensembl: ENSCGOG00000002896
UniProt: A0A6J2RP93
LinkDB
Position
19:complement(15606541..15628141)
AA seq 1441 aa
MAVYFDHRIEAPESSDVPSQLTWHSTLSVLAVASSSSSTGGNVDLYLQQGERAESCHLER
LHPPTVLRWHPTKPVLALGWENGEVVLLTHPSGDQTVLPSTHAACITLLEWSSSGSRLVT
GDQTGALAVWKVDARGRLQGNHLVKHEYNKPLTCCLFRPPSPGDDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLAFYVSTADGKVHTVDEHCKTSILLSVEGTIKKLLYLEKREV
LAVITDALMLSQYTLGPEGGAQEFMKVKLSSKTGQNVNIVWTENGLLITATGEQVIRLWD
LDGDDNYVLALDETLGFERGEMINCVSYCAGKEILAAGTSHGRIAMWKMVVQPAGSRGDT
KVLWKLQTPTEIEGNVLQLQWGSSLNLLAANNSNTVLILCEHVMSAHFSQQVAAVQLTPT
QLSITQFTTGVPLALQSDMHIKGVCVTKDSVTVWSGKQVTVYELSGTGLRNTGSFASDSH
VVAVHGENLYTVEPNRVQIRTPQGTVKQLLTFSKAEGNPALLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLTDQIANLGALRSVKCNANGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFVGRPSSGILQTEESERQQFQGAELSSRCPVSHFWDESEPRLFVCETLPIS
SESSASSFLDTMDVSVVTLFSTQEHGILLQDCYPKPSGLQALLALDVPYYYFSCKHGEKD
PASAEISTTTSADPQQTQFPHMVSRRALRDFVGLENCEKATRDAMLNFSFYLTIGDMDEA
FKSIKLIKSEAVWENMARMCVKTRRLDVARVCLGNMGNARAARALKEVEAEPEPEAQVAM
LAVQLGMLEDAEKLYKCCQRYDLLNNFYQASGQWQQALETAENNDRIHLRTTYYNYAKYL
ESIGDKTLALTYYENSDTHRVEVPRMLQDDTSSLEIYVNKMKDKNIYKWWAQYLESQSDM
DSALRFYESAQDYLSLVRVHCYMGNIQKASEIANDTGDRAASYHLARHYEGHDDIKQAVH
FYTRAQAYNNAIRLCKENGLDDQLMNLALLSNAEDMMEAACYYEEKGSHMDRAVALYHKA
GYVSKALELAFATQQFSALQLIAEDLNEYSDPALLARCSDFFITHSQYDKAVELLVAAKK
YHQALELCVVQSLTITEELAERMTVTDSKDLSEEARKELLERIADCCMRQGNYHLATKKY
TQAGNKLKAMRALLKSGDTEKIVFFANVCRQKELFIMAANYLQSLDWRNNPEILKTIIGF
YTKGRAPDLLAGFYEACAQVEIDDYQNYEKALDALTEAFKCVSKSKDPSAGQQEVRLADL
QHRVTLIKKFVHARRLYTEDAGEAVRLCEALLEEPELDPAVRIGDAFGFLVEHHCQQGNF
QVAYRKLEALQKLLPSQNVKYYVSQASLESLQKEMGVPMDRVDSRHSVKEEDEVEEDLNV
S
NT seq 4326 nt   +upstreamnt  +downstreamnt
atggcggtgtattttgaccaccgtattgaggcccctgaaagcagtgatgtgccctctcag
ttgacctggcactcaaccctttctgtactggctgttgcctcgagcagctcctccactggg
ggcaatgtagacctctacctgcagcagggagagcgtgcagagagctgccatttagaacgt
cttcacccgcccacagtgctgcgctggcatcccacaaagccagtattggcactaggctgg
gagaatggagaggtagtgttactgacacacccctctggagatcaaacagtccttcccagc
acacatgcagcctgcatcacactgctggagtggagtagctctggcagccgcttagtaact
ggtgatcagactggagcgctagcagtctggaaagtagatgctagagggagacttcaagga
aaccatcttgtgaaacatgaatacaacaaacctctaacttgctgtctcttcagaccgccc
tcgcctggcgacgatgtggcaatgttggcccgggcatcagttagtggagatgagagtgct
ctggacatgttcagctggaagggagcacctctcaagatgggcccacaggagggactcgcg
ttctatgtcagcactgcagatggtaaagtccacactgtggatgagcattgtaaaacaagc
atacttctcagtgtggagggcacaatcaagaaactgctctacctcgagaagagagaagtg
ctggctgtgatcacagacgcgctgatgttgtcacagtacactcttggacctgagggaggg
gcccaggaatttatgaaggtgaagttgagcagcaagactgggcagaatgtcaacattgtg
tggacagagaacggcctcctcatcacagcaacaggggagcaggtcatcaggctgtgggac
ctggacggagacgacaactatgttttggctctcgacgagacactggggtttgagagagga
gagatgatcaactgtgtttcatactgtgcaggaaaagaaatcttggcagctggtaccagc
catgggcgcatagcaatgtggaagatggtggtgcagccagccggcagcagaggtgatacc
aaggtcttgtggaagctgcagacacctacggaaatagaaggaaatgtccttcagcttcag
tggggctcgagcctgaatctgctggcggccaacaattcaaacacggtgctgatcctgtgt
gagcacgtgatgtcggcgcacttcagccagcaggtggcagcagtgcagctcaccccgacg
cagctcagcatcactcagttcaccacaggagtgcccctggctctgcagtccgacatgcac
atcaagggagtttgtgttactaaggattcagtgacagtctggagtggcaagcaggtcact
gtgtatgagctttcagggacaggtcttcggaatacaggatcgtttgctagtgactctcat
gtcgtagctgtacatggtgagaacctctacactgtggaacctaacagggtgcagattcgc
acgccacagggcaccgtgaagcaactgctgaccttctccaaggctgagggcaaccctgct
ctactcagtgtgtgtcagtcttacctggtggtaggcacagacacagcacacattagagta
tttgacctctcccgaagagatgccaaagctcactgcagtgctaagaacctgactgaccaa
attgccaatctgggagccctgaggtcagtcaaatgtaacgccaacggcagccaagtcagc
atcctaatctctcaggttaacgggcgaccggatcacaaagtgtacttttatgacgttgag
atggacactgtgacacactttgactttttcgtcggccgaccatccagtggtatcttacag
acagaagaaagtgaaaggcagcagtttcagggagcagagctcagtagtcgctgccctgtg
tctcacttctgggatgagagtgaacctcgtctttttgtctgtgagacgctgcccatcagc
tctgaatcctcagcatctagtttcttggatacgatggacgtgtcggtcgtgacactcttc
agtacgcaggagcacgggatcctcctacaggactgctaccctaaaccttcaggcctgcag
gcgctcctcgctctggacgtgccctactattatttcagttgcaagcacggtgagaaagat
ccagcgtcagcagagatttcaaccacgacatcagcagatccacagcagacccagttccca
catatggtgtccaggcgagctctcagagactttgtgggcctggagaactgtgagaaggca
acccgcgacgccatgctcaacttcagcttctacctgaccattggcgatatggacgaagcc
tttaagtctatcaagctcatcaagagtgaagcggtatgggaaaacatggcacggatgtgt
gtgaaaacccgccggctggatgtggcgcgcgtgtgccttgggaatatgggaaatgccaga
gcagcaagagcgctgaaggaggtggaggctgagcctgagccagaagcacaagtggctatg
ttggccgttcaactcggcatgctggaagatgcagaaaagttgtacaagtgctgtcaacgc
tatgacctgctgaacaatttctaccaggcttctggccaatggcagcaggctttggaaaca
gcagagaacaacgatcgcatccatctgcgcaccacctactacaattatgccaaatacctg
gagtccataggcgacaagacgctggctctcacatattatgagaactcagacacgcacagg
gtcgaagtgcccagaatgctgcaggatgacacttcatctctggagatatacgttaacaaa
atgaaagacaagaacatctacaagtggtgggctcagtacctggagagccagtcagacatg
gattcagcgctgcgtttctatgaaagtgcccaggattacctctccctggttcgagtgcac
tgctacatggggaacattcagaaggcctctgagatagccaatgacacgggtgacagggca
gcatcataccacctggccagacactacgagggccatgatgatatcaaacaggccgtccac
ttctacacacgagctcaggcctacaacaatgcaatacgactttgtaaggagaacggtctg
gatgaccagctgatgaatctggctctgctcagtaacgcagaggacatgatggaggctgcc
tgttactacgaggagaagggctcccatatggaccgagctgtcgcactctaccacaaggct
ggttacgtgtccaaagctctggagttggcctttgccactcagcagttctctgctcttcaa
ctgattgctgaggatctgaacgagtactctgacccagccctcctggcacgctgctccgac
ttcttcatcacacattcccagtatgataaagctgtggagttactggtagcagcaaagaag
taccaccaagccctggagctgtgtgtggtccagagcttgaccatcacagaggagctggca
gagaggatgactgtaactgattcaaaagatttgtctgaagaggcccgaaaggagctgctg
gagaggatcgcggactgctgcatgcgtcagggcaattaccacctggccaccaagaagtac
acacaggcgggcaacaagctgaaggccatgagggcgctcctaaagtcgggcgacacagag
aagatagtattcttcgccaatgtttgtcgtcagaaggagcttttcatcatggccgccaac
tacctccagtctctggactggcggaacaatccagagatcttgaagacaatcattggtttc
tacactaaaggcagggcaccagacctgctggctggcttctatgaagcctgtgctcaggtc
gagattgatgattatcagaactatgaaaaggctctagatgctttgactgaagcgttcaag
tgcgtatcgaaatcaaaggacccttcagctggacaacaggaagtgagactggctgaccta
cagcacagagtcacgctaatcaagaagttcgtccatgcacgcaggttgtatacggaggat
gctggtgaggcggtgcggttatgtgaagccttgctggaggagccggagttggaccctgct
gtcaggattggagatgcatttggtttcctggtggagcaccactgtcagcaaggcaacttc
caagtggcgtaccgtaaactggaggcgctccagaagcttttgccatcgcagaacgtcaag
tactacgttagccaggccagcctcgagtccctgcagaaagagatgggcgtgcccatggat
cgtgttgacagcaggcacagtgtgaaggaggaggatgaagtggaggaggacttaaatgta
tcttaa

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