Cottoperca gobio: 115024542
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Entry
115024542 CDS
T07513
Symbol
dmxl2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
cgob
Cottoperca gobio
Pathway
cgob04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115024542 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115024542 (dmxl2)
Membrane trafficking [BR:
cgob04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115024542 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
115024542 (dmxl2)
RAVE complex
115024542 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
NBCH_WD40
VPS11_N
Motif
Other DBs
NCBI-GeneID:
115024542
NCBI-ProteinID:
XP_029312095
Ensembl:
ENSCGOG00000016075
UniProt:
A0A6J2RRX9
LinkDB
All DBs
Position
3:13380599..13418795
Genome browser
AA seq
3118 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP
QGDRILAATEQLQLWAPPLKDALIEEEDGQLTEDKPHPVLNDWNCVWQCKTAASVHIAKW
SPDGEYFATVGKNDCLLKVWYPTTGWRSAVVAHDHSDKKPLPVHFSFVYLAHPRMVTGMS
WRKTSKYMPKCSVCNVLLTSCEDGVCRLWSETLLPEDNLLGGQISENTHSFSSSLPGLAG
NKDKIQHALESIHHLKHLRRGRRRSSALVAHSELLPSQLGTQDTHTHRHIAHHANALCHF
HISASINPNTDIPAVLAESAVFNPDDGSGGGGFVVHWLNNKDLSFTSSMDLFMLQLRKLS
EQQMDHTTEDPLDPEGSPMKFDFDLDDMSDKASSEQGEEGETGEQGSTKASSPGSSSSMP
LPSMLLERKMETLITEWNKSPDMLFTIHPADGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLNQGESASAGEPGRMVQRVSHSASASTGLGSSALVPS
PNPGLGISPAVMMVSKHVDGSLNQWAVIFAERSAFSNLLTVSHKFRYCGHRFHLNDQACH
TVLPLLLTSSHHNALLTPPSAPGSLEEELPTFSIPKGFPRKQLRNAATRTFHDPNAIYSE
LILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFVA
SDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDAITNQCG
SNTQLLHVFQEDFILGYKPQKEPEAYAPAFPSGEDYQPAPFSEKFFLVVIEKDLNRNSVL
QMWHLHLKSVQACVDEPGPDFSFQTQLMVPNQVANADSSPETSPIRPLPRSSSTANLQSA
SKLILSSKLVYSKRLNLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFW
RCAVEGDDGYSEDDRDNHAYRWEPWALMNEEEDNNSAVCVSGRPVAVSCSYIGRLAIAFK
KPRLGQLQGSGEDFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSNLF
VYSRSDLYMSRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEPTSS
KEGVAVITLPLGGSIKQGIRSRWILLRSVDLLSSVDGTPSLPVSLSWVRDGILVVGMDCE
MHVYAQWHQDKKPGEGEEGNLSSADIAGGQTTTSSAFEGRARSKSVFEGSVAVDEALRAP
AGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVRDV
EAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYSLMLADLDTSYK
GAEEAAKGADGEGSQKSAEDQYSDLFQMQAVTTDDFVNFATDKPEKKSRVINLSQYGPTY
FGLEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTNAEVTSSTDQKCTGGEALDEC
GLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEEQLNMIPAMQRGDP
QWSELRAVGAGWWIRNINTLRKMVEKIGKAAFQRHNDPLDAALFYLAMKKKAVLWGLFRS
QHDDKMTKFFKNNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVLMEKM
EDIQLAMIVARLYEADFENSSTCQGLLHEKVLGCNRDGSGYHCSRLHPDPFLRSISYWII
KDYTRALDTLLERIPKEDDENPDVMVKACNPVVFSFYNYLRTHPLIIRRHLAIPEGTATT
VGLTVEKSSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSGSSPISKAS
SKANVNSTQTLENGTQGGLDWRSPAAPADAWGGNDSVGGLDWSQPLVKVEDDGLKLDWEE
NKEDDEDEDEDDDGLTMKKTETETDRGLESGAPKLKRADSQGESEVDVIAEQLKFRACLK
ILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHTICNYKVEGKEEDSEVERWRERTA
SVDVSDDTLDRTEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGA
KGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIATTKTVIANPVLHLS
NHIHDILHTVTYMENPPHPDLMDDRVNALHTLAASLSACIYQALCDSHSYSSQTEANQFT
GMVYQGLLLSERKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREEDQPRLNVLLCE
GVMAVYLALLIHGLGTHSSNELFRLAAHPLNTRMWAAVFGGGAKLVIKPKRPEGPPVAAD
FEAARPEDSQEAGRPEQSNLTPNPTPIPTDTQRPKRPPPPVSKGEGLGTVAPATKASFAP
PQTPAEDVDRYRRRFNMRMLVPGRPVKETPAAPPPVPTERPAYREKFIPPELSMWDYFVA
KPFLPLSDSNALCDSDESGAEEDEDDDDAFLSDTQITEHSDPNSYSWALIRLVMVKLAHH
NVKNFLPLTGLDFTDLPVTSPLSNAVLKTLENWEQLLLERMNKFDAPPPNYINTFPTDLS
AGGGPAILRHKAMLEPDNTPFKTKNQQSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQC
ESVDNHMDRINPNCIAGASSPYKVEADLGYPGGKAKIIHKESDIIMAFAINKANSNEIVL
ASTHDVQEVDVSTLVAVQPYTWIGDDFDKESRSSDDVDHRSSQTNIAQTTSVPFAPPQMQ
VSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPLYQYYMTGAQDGSVRMFEWNRPQQL
ICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHTKTCGDF
AFITSSSLIATAGQSNDNRNVCLWDTLISPSNTMIHAFPCHENGATVLQYASKQQLLITG
GRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNMKVWKLTGHGLMH
SFSTEHTKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSLVDIL
NT seq
9357 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtgctgacgggagctgtaaaccctggagattgctgctattcggtg
ggaagcgtgaatgacattcctttcacggcctatggatcaggttgtgatgtagtgattctg
gccagtgactttgagtgcgtgcagattatcccgggagctcagaatggaaacatacaggtg
ggctgtgtggagtgctcccaccagcttggcaggattgctgcgtcctacggaaacacagtc
tgcatctttgagcctctttctaccaacccaaacaaacgccacaagcagcttaactatcag
tggcaaaagacgggacagttcttcctcgatgccatcacctacaacctggcctgggaccca
caaggggaccgtatcctagcagcaactgagcagctccagctgtgggctcctccactaaaa
gatgcactgatagaggaggaggatggacagttgactgaagacaagccccaccctgtcctc
aatgactggaactgtgtctggcagtgcaagactgctgcatctgttcacattgccaagtgg
tctcctgatggggagtactttgcaacagttggaaagaatgactgtttacttaaggtgtgg
tatcccaccacgggctggcgttctgcagtggtggcccacgaccactccgataaaaagcca
cttcctgtgcacttctcctttgtttacctggcacatcctcgcatggtcaccggtatgtcc
tggaggaagaccagcaagtacatgcccaagtgttcggtatgcaatgtgttgctgacatcc
tgcgaggatggcgtgtgtaggttgtggtccgagaccctgctaccggaagacaacctgctt
ggaggacagatctctgagaacacacactccttcagctctagtctgccaggcctggcaggc
aataaggacaaaatccagcatgctttagaatcaatccaccacctgaagcatctgcgccgg
ggccggcgacggtcctctgctctggtggcacacagtgagctgctgccctctcagcttggc
acgcaggacacacacactcaccgccacatcgctcatcatgccaatgccctgtgtcacttc
catatctcagccagtattaaccccaatacagatatcccagcagtgctggctgaatctgca
gtgttcaacccagacgatggcagtggtggtggtggcttcgtcgttcactggctcaacaat
aaagacctaagcttcacttcctcaatggacctctttatgctgcagctccgtaagttatct
gaacagcagatggaccacactactgaggaccccctggaccccgaaggatcccctatgaag
tttgactttgacctggatgacatgtctgacaaagcgtcctcagagcagggcgaagagggt
gagacaggggagcagggaagcaccaaagcgtcctccccgggatccagctccagcatgcct
ttgccctccatgctgctggagaggaagatggagactctgatcacagagtggaacaagagc
ccagacatgttgttcaccatccaccctgccgacggatctttcctggtttggcatgtgaag
tacttggacgaattcaaccagggcatcttcagacaggttcaggtgtccttctcctcccgt
attccagtggcatttcctacaggtgatgccaactcactaagtaaaaacatcctgatgtac
gcctgcactttgaatcagggtgagagtgcaagtgcaggggagccggggaggatggtccaa
cgtgtgtcccactctgcttcagcgtcgaccggcctgggttcatccgcactggtcccctct
cccaaccctggccttggcatcagtcctgctgtcatgatggtctcaaagcatgtcgatgga
tctctcaatcagtgggcagtgatatttgctgagcgctctgccttctccaacctactgact
gtatctcacaagttccggtactgcggccaccgcttccatctgaacgaccaagcctgccac
acagtgctgccactgctgctgacctcctctcaccataatgctctgctcacccctccctca
gcccctggcagcctggaagaagagctacctaccttttcaataccaaagggatttcccagg
aagcagcttcgtaatgcagctacaaggaccttccatgaccccaatgccatctacagtgag
ctgatcttgtggagggtggaccacattggacccctgtcctgcactggaggggtctctgaa
ctggcccgtatcaactctctgcacacctctgcgttcagcaatgttgcttggctacctaca
ctagtacccagctctgtacttggaacttactgtaacagtgccagcgcctgcttcgtggca
tcagatggtaaaaacctgcgtctctatcaagctgtggtggatgccagaaaacttctggat
gagctgtcagaccctgaaacgtctaaactggtgggcgaagtgttcaacatcgtcagccag
cagtccactgccagacctggatgtatcatagagttggacgccattactaaccagtgtggc
tccaacacccagctgctgcatgtcttccaagaggacttcattctaggttacaagcctcag
aaagaaccagaagcatacgcaccggcctttccatctggtgaagattaccaacctgcccca
ttctctgagaagttcttcctggtggtgatagaaaaggatctcaacaggaactctgtcctg
cagatgtggcacctgcacctcaagtctgtgcaggcctgtgttgatgagccgggcccagat
tttagcttccagacccagcttatggttcccaatcaagttgcgaatgctgattcatctccg
gagacctcacctatcagacccctgcctcggtcatcctcgacagccaacttgcaatcagcc
agcaaactcatcctcagctctaagctggtgtacagcaagcggctcaacctgccccacggg
gtggaggttaccagggcaaccccctctgcaggtcatttgagttcctcttccatctaccct
gtgtgcctggctccgtacctgattgtcactacctgctctgactctcgcgtgcgcttctgg
cgctgtgctgtagagggtgatgacgggtacagtgaggatgaccgggacaaccacgcttac
cgctgggagccctgggctctgatgaatgaggaggaggacaacaacagtgctgtgtgtgtg
tctggacggcccgttgctgtgtcctgctcttacatcggcaggctggccattgcctttaaa
aagccacgactaggacagctgcagggttctggagaggacttctccatgcatgtgtccatc
tatgagtgtgaatctactggtggctcagagtgggttttagagcaaactcttcacctggac
gacttcaccagaccctcgtcaaccctggatccaagagtcagtgtggactccaacctcttt
gtctacagcaggtctgacctgtacatgagcagagaccatagctcccccaacatcaagcac
tacgttcacttggactggctgtcaaaggaggatggatctcacatcctcactgtgggcgtt
ggatccaacattcttatgtacggccgtatctctggcgtcgtcaatgagccgactagcagc
aaggagggggtggctgtcatcacccttcctctagggggcagtatcaaacagggcatccgc
tcacgctggatccttcttcggtccgtggacctcctgtcctccgttgacggcacgccgtct
ctgccagtctccctgtcctgggtgagggatggcatcctggtggtgggcatggactgtgaa
atgcatgtgtatgctcagtggcatcaggacaagaagcccggggagggagaggaaggaaac
ctatcatccgcagacattgctggaggtcaaaccacgacctcctcggcctttgaaggcaga
gccaggtctaagagtgtgtttgaagggagtgtcgcagtggatgaggcccttcgtgcccca
gcaggtcttcaggaagggggactgtttgaagcagctcactccctgtctccaactctaccc
caataccatcccacccagctgctggaactcatggacctgggcaaggttcgccgtgccaag
gccatcctcgctcacctggtgaagtgtattgctggggaagtcgctgtggtgagggatgtg
gaggcaggtgagggcggagccaggagacatctgtcccgtaccatcagtgtgactggcagc
acagcaaaagacaccattgtggctggccgcgatgggggcagggactacacagagatcaac
tccatccctcccttgcccctctattccctcatgttggctgacctagacacctcgtacaag
ggagcagaagaggctgctaagggggccgatggtgaggggtcccagaagtcggcagaggac
cagtattctgacctcttccagatgcaagcagtcaccacggatgattttgtgaactttgcc
accgacaaaccagagaagaagtctcgagttatcaacctttctcaatatggacctacttac
tttggactggaacatgctcaggtattgtccagtcacctcatgcactccagcctcccagga
ctgaccagactagagcagatgttcttggtggccctggctgatactgttgcaaccaccaat
gctgaggtcaccagctccactgatcaaaaatgcacaggtggcgaggctctcgatgagtgt
ggactgaggtacctgctggccatgcgtcttcacacctgcttgctgacctctctgccacct
ctctaccgcatgcagctgctccaccagggcctatcaacatgccactttgcttgggccttc
cactcagaggcggaagaagagcagcttaacatgatcccagccatgcagagaggcgaccca
cagtggtctgagctcagagctgtcggagcgggttggtggatacgcaacatcaacacactg
cggaaaatggtggagaagatcggtaaagctgcgttccagagacacaacgaccctttagat
gctgctctgttctacttggccatgaagaagaaagctgtcctctgggggctcttcaggtct
caacatgatgataagatgactaagttcttcaagaacaacttcactgaagaccgctggcga
aaggcagctctgaaaaatgctttctccctgttgggaaagcagcgctttgaacagtctgct
gcctttttcctactggctggatcactcaaagacgccatagaggtgttgatggagaagatg
gaggatatccagttagccatgatagtagcaaggctgtatgaggctgactttgagaactca
tccacctgccaaggcctccttcacgagaaggtcctgggctgtaacagggacggaagtggt
taccactgttcacggctgcaccctgacccattcctccgcagcatatcctactggatcatc
aaggattacacgcgagctctggacacactgttggaacgaatccccaaagaggatgatgag
aaccctgatgtgatggtgaaagcttgcaaccctgtggtgtttagtttctataactacctg
aggacacaccctttgatcatccgtcgccacttggcaattccagagggcaccgcaacgacc
gtgggcctcactgttgagaagagcagcgcagatgagattaaccttatagagcgcaaactg
ttcttcactactgccaatgcacacttcaaggtgggctgtccagttctggctctggaagtg
ctctccaagattcccaaagttaccaagaaatccggctcctcgcctatcagcaaagcttct
tccaaggccaacgtaaactcgacacaaacactggaaaatggaacccagggtggcttggac
tggagatcccccgcggcccctgctgatgcctggggaggaaatgatagcgtgggagggttg
gactggagccagccattggtcaaggtggaggatgacggcctgaagctggactgggaagag
aacaaagaagatgatgaagatgaagatgaagatgatgacggtctgaccatgaagaaaaca
gaaactgagacagacagaggtttggagagtggcgcgcccaaactgaagagggcagactcg
cagggtgagtcagaggtggacgtgatagcagagcagctgaagttccgtgcctgtctgaag
atcctgatgacagaactgcgcacgctggccacgggctttgaggtggatggcggaaagctc
cgctttcagctctacagttggctggagaaggagatcgcagctatgcatacgatctgcaac
tacaaggtggagggtaaggaggaagattcagaggtggagaggtggagagagcgtacagca
tcagtggatgtatcggacgacaccctggatcgcacagaggcgggggcctacgagcgtcac
cagatggagcgacgtcgtcttcaggcgaagcagcagcactctgagaggcgcaaggcgtgg
ctgaggaagaaccaggccctgctgagggtgtttctgtcctactgtagtcttcatggagcc
aagggaggaggagtcacctctgttcgcatggagcttctcttccttctgcaggagagccaa
caggaaaccacagtgaagcagctgcagtctcctctgcctctgcctactacactgcctctg
ctatcagcttgcattgccaccaccaagacggtcatagccaatccagttctccacctcagc
aaccacattcacgacatcctccacaccgtcacctacatggagaacccgccgcatcccgac
ctcatggatgatcgggtgaatgctctgcacacacttgcagcatctctgtccgcttgcatc
tatcaagcactgtgtgacagccacagctacagcagccagacggaggccaaccagtttaca
gggatggtgtaccagggcttgttgctcagtgagaggaaacgactccgcacagaaagcatc
gaagaacatgtaactcccaactccgctcctgcacagtggccaggtgtgtcgtccctgatt
tctctgttgacgtctgccagagaggaggaccagccgaggctcaacgtgctgctgtgtgaa
ggggtcatggctgtttatcttgcactgctcattcacggcctgggcactcacagcagcaat
gaacttttccgcctggcagcacatcccctcaacacccgcatgtgggccgccgtctttggg
ggaggggccaaactcgttattaagccaaagaggcctgagggcccaccagtggcagctgat
tttgaggcagccaggccagaggactctcaagaggcaggaagacctgagcagagcaacctc
accccaaaccccactcccatccccacagacacccagcgccccaaacgaccccctcctccc
gtttcaaagggagaggggttgggcactgtggcaccagcaactaaggccagctttgctccc
cctcagaccccagcggaggatgtggaccgatacagacgtaggttcaacatgaggatgctc
gttcctggacgccctgtaaaggagacgccagccgccccgcctcctgttcccacagagaga
cccgcctacagggagaaattcattcctcctgagctgagcatgtgggactactttgtggcc
aaacccttcctgccgctttcagacagcaacgctctgtgtgactcagacgaaagcggtgca
gaggaggacgaagatgatgacgacgccttcctttctgacacacagataacggagcactct
gaccccaactcctacagctgggctctgatccgcctggttatggtgaaactggctcatcac
aacgtcaagaacttcctccctctcactggccttgacttcacagacctgccagtcacctcc
cctctcagcaacgctgtgttgaagactttagagaactgggagcagcttctgctggagcga
atgaacaagtttgacgccccgcctcccaactacatcaacactttccctactgacctcagt
gcaggcggtggccccgccattctccgacacaaggccatgctggagccagacaacacaccc
ttcaagacgaagaaccagcagtcctttccagcccgacgtctttggcatttcctggtcaaa
caggaagttcttcaagagactttgatccgttacatctttactaagaaaaggaagcagtgt
gagtctgtagataaccatatggaccgtataaacccaaactgcatagcaggagctagcagt
ccatataaggtggaggcagatctgggctacccaggaggcaaggctaaaatcattcataag
gagtctgatataatcatggcatttgccatcaataaggctaactccaacgagatagtgttg
gcctccactcatgatgtccaggaggtagacgtgtctaccctggtggctgtccagccctac
acctggataggggacgactttgataaggagtcccgcagctctgacgacgtagaccatcgt
tcttctcaaaccaacattgcccagactacctccgtcccctttgcaccaccacagatgcag
gtctctgcgtccatgccgtggcttggcagtgggcagaccagcatgggagccagtgtgatt
atgaagaggaatctaaacaacgtgaagagaatgacttcccatcccttatatcagtattac
atgacaggggctcaggacggtagtgtgagaatgtttgaatggaacagacctcagcagcta
atttgcttcagacaagcaggcaacgctagagtcacccggctctatttcaactcccagggc
aataagtgtggagttgctgacggagagggcttcctcagtctctggcaggtcaaccagaca
tcctccaaccccaaaccctacctgagttggcagtgtcacactaagacctgcggtgatttc
gccttcatcacgtcctccagcctcatcgccactgccggacagtccaatgataacagaaat
gtttgcctgtgggatactctgatttcacctagcaataccatgatccatgcattcccctgc
catgagaacggggccactgtgctgcagtatgcttctaagcagcagctgctcatcactgga
ggcagaaagggctttgtgtgcgtgtttgacatccgccagagacagctgctccacactttc
caggcccatgactcagccatcaaggccctcgcactggatgccttcgaggacttctttgtc
actggttctgcagagggcaacatgaaggtgtggaagttaaccggccacgggctcatgcac
tcttttagcaccgagcacaccaagcagtccatcttccgcaacatcggtgccggtgtcatg
caggtagaaacgcggcccggtaaccgcatcttcacctgcggagcagacggcaccctgaag
atgagggtcctccctgaccgctacaacatccccagcagcttggtcgacatcctgtaa
DBGET
integrated database retrieval system
