Cottoperca gobio: 115024634
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Entry
115024634 CDS
T07513
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
cgob
Cottoperca gobio
Pathway
cgob04145
Phagocytosis
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04518
Integrin signaling
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115024634
04518 Integrin signaling
115024634
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115024634
09144 Cellular community - eukaryotes
04510 Focal adhesion
115024634
09142 Cell motility
04820 Cytoskeleton in muscle cells
115024634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115024634
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115024634
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115024634
Membrane trafficking [BR:
cgob04131
]
Endocytosis
Phagocytosis
Opsonins
115024634
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115024634
Exosomal proteins of colorectal cancer cells
115024634
Exosomal proteins of bladder cancer cells
115024634
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115024634
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
TSP1_CFP_C
EGF_3
TSP1_CCN
TSP1_ADAMTS
EGF
Motif
Other DBs
NCBI-GeneID:
115024634
NCBI-ProteinID:
XP_029312254
Ensembl:
ENSCGOG00000013977
UniProt:
A0A6J2RQE5
LinkDB
All DBs
Position
19:10130065..10139159
Genome browser
AA seq
806 aa
AA seq
DB search
MCVRVYKDDENGWSPWSEWTHCSATCGRGGQQRGRSCNGIMPSCAGPSVQTRSCMLIKCG
RKARPDGNWGLWSPWSACTTTCGEGNNTRVRLCNQPPPQKGGRGCTGSAMETQHCNNTLC
PIAGGWTGWTDWSLCSESCGGGLTSRQRECLNPAPQHGGKSCAGDAVDYEACNKQPCPLD
TCLLSNPCFPGVKCTSHRDGSWECGGCPLGLQGNGTHCEDENECEVESLCVTECVNTDPG
FYCLPCPPRYKGTQPYGLGMHDAQKTRQVCEPYNPCKDNTHTCHKYAACVYLGLASEVLF
KCVCAVGFAGDGSLCGEDSDLDGWPNNRLPCKQNATYHCQKDNCPTLPNSGQEDLDKDGQ
GDTCDTDDDNDDIIDERDNCPLVYNPRQFDSDRDGVGDRCDNCPFESNPLQTDTDDDGEG
DACSIDIDGDEVLNDRDNCPLVYNTDQRDTDLDGVGDQCDNCPLLHNPQQLDSDSDLVGD
MCDNNEDIDEDGLQNSMDNCPYIPNSNQADHDKDGKGDVCDHDDDNDGIPDDRDNCRLVP
NRDQLDSDGDESGDACFDDFDNDSIPDALDPCPLNQDISSTDFRKFQVVLLDPKGTTQSD
PLWVIRSQGTELLQSANSDPGIALGYDKFSSVDFSVTFYVNTNRDDDYAGIVFAYQSSRR
FYVVMWKQVSQAYWEKKPFKAFGTAGVSIKLVNSTTGPGEYLRNALWHTGNTRHQVRTLW
HDPNKIGWKDFTAYRMHLIHRPKTGFIRVVVYDGREILSDSGAVYDHTLAGGRLGLFVFS
QEHVLFSDLRYECRGKISRQNICPYY
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtacgtgtatataaagatgatgaaaatggctggtccccgtggtctgagtggacc
cactgttcggccacctgtggacgtggagggcagcaaaggggccgatcctgcaatggcatc
atgccgtcctgtgccggcccgtcagtccaaacccgcagctgcatgctgataaagtgtggc
cgcaaggctcgtcctgacgggaactggggcctttggtctccttggtctgcgtgtacaact
acgtgtggagaaggcaacaacacacgggtacgtctctgcaaccagcctccgccccagaag
gggggcagagggtgcacggggagcgccatggagacacaacattgcaacaacacgctctgc
cccattgctggaggctggacaggctggaccgactggtcgctgtgctcagagtcgtgtggt
ggaggtcttacgagtcgccagcgggagtgtttgaaccccgcccctcagcacggtgggaag
tcttgtgctggagacgctgtggactatgaagcatgtaacaaacaaccatgtcctttagat
acatgtttgctttcaaatccatgttttcctggagtgaaatgcacatcccatagagatggg
tcatgggagtgtggaggttgtccgttgggtttgcaaggcaatggcactcactgtgaagat
gagaacgagtgtgaagtggagagtttgtgtgtcacagagtgtgtaaacacagaccctggc
ttctactgtctgccctgtcctcctcggtataaaggcacccagccgtacggcctcggcatg
cacgacgcccagaaaaccaggcaggtgtgtgagccatacaatccttgcaaagacaacaca
cacacctgccacaagtatgcggcttgtgtgtacctgggcctggcgtctgaggttttgttc
aagtgtgtgtgcgctgttgggtttgcgggcgacggctccctgtgtggtgaagactctgat
ctggatggctggcccaacaacagattaccctgcaagcagaatgcaacatatcactgtcaa
aaggataattgccccacactaccaaactctggacaggaagacctggacaaggacggacag
ggagacacctgtgatactgatgacgacaatgatgacatcatagatgagagggataactgc
ccgctggtgtacaaccctcggcagttcgactctgacagagatggagtcggggatcgctgt
gacaactgtccgtttgaaagcaacccgctgcagacggacactgatgacgatggagaggga
gacgcctgcagcattgacattgatggagatgaggttctgaatgaccgtgacaactgtccc
ttagtctacaacactgaccagagggacacagacttggatggtgttggagaccagtgtgac
aactgtcctcttctacacaacccacagcagctggactctgacagcgacctggtgggggac
atgtgcgacaacaacgaggacatcgatgaggacggcctccaaaactctatggacaactgt
ccctacattcccaatagtaaccaggccgaccatgacaaggacgggaagggagacgtctgt
gaccatgacgacgacaacgacggtatccctgacgaccgggacaactgcagactcgtgcct
aacagggaccagctggactctgatggtgatgagagcggagatgcatgctttgatgacttt
gacaatgacagtattccagatgcgctggatccatgtccgttgaaccaggatattagctct
acagacttcaggaagtttcaggttgttttgttggaccctaaaggcaccacgcagtctgac
cctctctgggtgatccgcagccaaggcacggagctgctgcagtcggccaactcggaccct
ggcatcgctttaggatatgacaagttcagctcggtggacttcagcgtgacattttatgtg
aatacgaaccgagatgacgactacgcaggcattgtgttcgcctaccagtccagtcgacgc
ttctacgttgtcatgtggaaacaggtgtctcaggcatactgggagaaaaagccgttcaaa
gcttttggcacagcgggagtctccatcaaactggtcaactccaccacaggaccgggggag
tatctacgcaacgccctgtggcacaccggaaacaccagacaccaggtcagaacattgtgg
catgatcccaacaaaattggctggaaagactttacagcctaccgcatgcacctaatccac
agacccaagactggtttcatcagggtggtggtgtacgacggcagagagattttatctgac
tcgggggcggtgtacgaccacaccctcgctggaggcagactgggactgtttgtcttctct
caggaacacgtcctcttctcagacctcagatatgagtgcagaggtaagatatcccgtcaa
aacatttgtccttactactga
DBGET
integrated database retrieval system