Cottoperca gobio: 115024753
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Entry
115024753 CDS
T07513
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cgob
Cottoperca gobio
Pathway
cgob03420
Nucleotide excision repair
cgob03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115024753 (ercc4)
03460 Fanconi anemia pathway
115024753 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgob03032
]
115024753 (ercc4)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115024753 (ercc4)
DNA replication proteins [BR:
cgob03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115024753 (ercc4)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
115024753 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
115024753
NCBI-ProteinID:
XP_029312437
Ensembl:
ENSCGOG00000005609
UniProt:
A0A6J2RSM7
LinkDB
All DBs
Position
19:17324443..17330631
Genome browser
AA seq
897 aa
AA seq
DB search
MAEPLLEFETEMFLSLFGCDGLLVAAEGMGIDRILLQFMRVYSEQGSLVLLLNTTTPEQE
FFTEQLRVEGVTHLPRTVTSDVQSAERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLVSG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPSLEAE
DLSVENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKLFGSNSGWLFLDSSTSMFMNARGRVYRFPDTKKKLKVGAEAEKQKPSSSSSS
SSSSSSGVKRELVLEKSPKWEALTEVLQEIETENKSSQQEPGPVLICASDDRTCAQLQQY
IRHGSDWMLNRLYVRTIGKLDSAAAASLELESCKKGSGWPKKGDKGKEKKSTKSKKRPSL
TLTQMVGKEETDEAAEMGSSGDEEELMEEEEPLKLDLSSDAYYGVLKEPLTVIHPLKGLT
DPHSLTRVLHEVEPSFVVLYDAEISFVRQLEIYKASRPGKTLRVYFLIYGGSTEEQKYLT
ALSREKKAFEHLIREKAIMVIPEEREGRGDTNLDLARNLEPANATTNTRRAGGQEQPTEP
SRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSVSDLIGSLQSGRL
YTQCLSMTRYYKKPVLLIEFDPAKPFSLMARSDFRHEISSTDVSSKLTLLTLHFPRLRIL
WCPSPHATAELFVDLKQGRLEPDGAAAQAVTAESDMVAESADLYNPGPYDFLLKMPGVNI
KNYRALVKNADSLADLAKLSKDKLAEILGNANNSKLLFEFLHNVADVPAPVQKAKKT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgctgctggagtttgagactgagatgttcctgagtctgttcggctgtgac
gggctgctggtggcggcggagggcatggggatagaccgcatcctgctgcagttcatgcgg
gtttactcggagcagggcagcctggtccttctgttaaacacaaccacacctgagcaggag
tttttcacggagcagttgcgagtggagggtgtgacccacctgcccaggacggtgaccagc
gacgtgcagagcgctgagcgctataatgtttacaccgagggaggggtgctgttcgtcacc
agcagaatcctggtggtcgacttcctcactgaccgcatccccgctcatctcgtatcaggc
atcctggtgtatcgtgctcataaaatcatcgagtcgtgtcaggaggctttcatccttcgt
ctgttcagacagaagaacaagaccggcttcatcaaagccttcactgacaaggccacgtcc
ttctcctcgggcttctgccaggtggagcgtgtgatgaggaacctcttcgtcaagaagctc
tacctgtggcccaggtttcaagcgtcagtaaacacagcgctggacaggcacaagccggag
gtggtggagctccatgtgtcgttgacgccggctatgagggccatccagagctccatcctg
gacatcatgagcgcctgtctgaaggagctgaagcgctacaaccccagcctggaggccgag
gacctctccgtggagaacacgctcggcaacgccttcgaaaagaccatccgtcactacctg
gaccccttgtggcaccagctgggggcaaagaccaaagccctggtccaggacctgaaagtg
ctgagggtcctcctgctctacctcacccagtacgactgtgtcaccttcctcaatctgctc
gagtcgctgcgctccagccaaaagctcttcggatccaactccggctggttgttcctcgac
tccagtacctccatgtttatgaatgcccggggtagagtgtaccgcttccctgacaccaag
aagaaactcaaagtgggagcggaggccgagaaacagaagccctcttcctcttcctcttcc
tcttcctcctcctcctcaggggtgaagcgggaacttgtgctggagaagagcccgaagtgg
gaggctctgactgaagtactgcaggagatcgagacggagaacaagagctctcaacaagaa
ccaggtcctgtgctgatctgtgccagtgatgaccggacgtgtgcccagctgcagcagtac
atccgccacggctccgactggatgctcaaccgactatatgtccgcacgatcggcaaactg
gactctgctgcagccgcttcacttgaacttgagtcgtgcaaaaagggcagcggctggcct
aaaaaaggagataaaggaaaagagaaaaagtccacgaagagtaaaaaaaggccatcactg
acgctgacccagatggtggggaaggaggagacggatgaagcagcggagatgggcagcagt
ggagatgaggaggaactgatggaggaggaagaaccgctgaagctggatctgtcgtcggat
gcgtactatggcgtcctaaaggagccgctgactgtcattcacccactgaaaggcctcact
gacccccacagcttgacgcgggtgctgcacgaggtggagcccagtttcgtggtgctgtac
gacgctgaaatcagtttcgtccgccagctggagatctacaaagccagtcggcccggaaag
acactgagggtgtattttctcatctacggaggctcgacagaagaacagaagtacctgacg
gcgctgtccagggaaaagaaagcattcgaacacctgatcagggaaaaggcgattatggtc
atcccagaggagagggaggggcgaggagacaccaacctggaccttgctagaaatttggag
ccggccaacgccaccaccaacacccgcagagcaggaggccaggagcagcccacagagccc
tcacgagtcattgtggacatgcgggagtttcgcagtgaactaccctccttgctgcaccgc
cgggggctggacatcgagcccgtcaccctcgaagtaggcgactacatcctgaccccagac
acgtgcgtcgagcgcaagagcgtcagtgatctgattggctcgttgcagagcggccgcctc
tacacccagtgtctctccatgacccgctactacaaaaaaccagtgctcctcattgagttt
gacccggcaaaacccttttccttaatggcccgatcggatttccgtcacgagatatcgtct
actgacgtttcttcaaaactcactttactcactttgcacttcccccgcctccgtatactc
tggtgcccctccccacacgccacagccgagctcttcgtggatctgaagcaaggacgcctt
gaacccgatggtgcagccgctcaggccgtcacagccgagtcagacatggtggctgaatca
gcagacctctacaaccccggaccttatgacttcctgttgaaaatgcccggggtcaatatc
aaaaactacagggcccttgtaaaaaatgcagacagtctggcagatttagccaaactcagc
aaggacaagctggcagaaatactcgggaatgctaacaactccaagctgctgtttgagttt
ctgcataatgtcgctgatgtccctgctcctgtgcagaaggccaaaaagacatga
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