Cottoperca gobio: 115024799
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Entry
115024799 CDS
T07513
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115024799 (rnf40)
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115024799 (rnf40)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
115024799 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
ADIP
zf-RING_UBOX
Rab11-FIP3
zf-RING_2
zf-RING_5
OVT1
zf-rbx1
SpoIIE
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
115024799
NCBI-ProteinID:
XP_029312506
Ensembl:
ENSCGOG00000007042
UniProt:
A0A6J2RQI5
LinkDB
All DBs
Position
19:15925141..15937775
Genome browser
AA seq
994 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKNKKEEKTTTTLIEPIRIAGVSSTEDMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLDENVHVLRKRIEPDTPV
TSTPAPPAPPLPEPTPMEEDGVNLASPTSVVPPPPLPEGQSEGEQQEERQEGQKQPPPPS
GSEELTPTESSQDSTTESSPPPAPLSDNAKGYLVTLEHSSEEELTLHLQDRMQFSKEAIA
CLVCVFDRLHSRIDNMCKQVQAAACDGDSQSDIINVNHTLLEENTRLRDLATLLQGRHHK
MSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAMEQLKSGYSS
TGSSGVLSGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAVRESEKLKMD
LRNIPEDVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQIEHMESD
ELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNH
NLQLKGDVQRYKRKLRETQMEINKLRSQSGDTGVPITEETTNDSIDVKKEEDEDQEEEEE
RRKELERQRARERDRERETERERERERERERQRSDELKRKDSDTLKMLRVELKKAQESQK
EMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKLADEDAL
RKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLREKDDANF
KLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQSALAALEK
ELSVRSQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERESSNLKR
AQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETVLTKCFHVF
CYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaaacgtccctcaggaggggacagcccccctggcccacct
gagaagaaaaataaaaaagaggagaagaccaccactactcttattgagcccatacgcata
gctggagtctcctctacggaggacatggacatgaaggtcctccaattcaagaataagaag
ctgtgtgagcgcttggagcagagacagacgatggaggatgagttacgagagaaaattgag
aagctggagaagagacaagccaccgatgacacgaccctgctgatcgtcaaccgctactgg
tcgcagttggatgagaatgtgcacgttctacgcaaacgtattgagccagacactccggtg
acgtctacacctgccccacccgcaccccctctccctgaaccaacaccaatggaggaagat
ggtgtcaatctggcctcaccaacttctgtcgtgcctccacctccactcccagagggccag
agcgagggggagcagcaggaagagcggcaggaagggcagaagcagccccctcctccttct
gggtcagaagagttgacacccacagagtcgtcacaggactcaacaacagaatcatcgcca
ccgcccgctcccctaagtgacaatgccaagggttacctggttacattggagcacagcagc
gaggaggagctcaccctgcacctccaagaccgcatgcagttcagcaaggaagccattgcc
tgcttggtctgtgtctttgacaggctacacagccgcatcgacaacatgtgcaagcaagtc
caggctgcagcgtgtgacggcgatagccagtctgacatcatcaacgtgaaccacacactg
ctggaggagaacactcgactacgagacctggccacgctcctgcagggccgacaccacaag
atgtccatggagtacaatgagttagtggataaggtgacgagctcagagaccaaggtgtct
gagatggagacgacggtggaggacctgcagtgggacattgagaaactccgcaatagggaa
cagaagctcaacaaacatctggcagaagccatggagcagctgaagtctggatacagcagc
accggcagctcaggtgtactttctggaggacaaattacactgaacattcagaagtttgag
agtctgaatgcggagttggagcacaaccaggagttggctaatagccgcatggcagagttg
gagaaactgcaggtggagctccaggaggctgtgagggagagcgagaagctcaagatggac
ttgcggaatattccagaagatgttgtaaaggagactctagagtacaaatgtctgcagtcc
caattctccctgctgtacaacgagtccctcggggtaaaaacccagctggacgaggcacga
gccctcctgctcactgccaagaacgcccacctccgacagattgagcacatggagagtgat
gagctgtcccttcagaagaagctgaggactgaggtcatccagctcgaggataccctggct
caggtgcgcaaagagtatgagatgctgcgcatcgagtttgagcagaacctggcagccaat
gagcaagcaggaccaatcaacagagagatgcgacacttaatcagcagccttcagaaccac
aacctgcagttgaaaggtgacgtgcagcgctataagaggaagttgcgtgaaacacagatg
gagatcaataagttgcgttctcaaagtggcgacacaggggttccgattacagaagagacg
acgaatgacagcatcgacgtgaagaaagaggaggatgaggaccaggaggaggaggaggag
aggaggaaggaactggagagacaacgggcccgggagagagacagggagagagagactgag
cgagaacgggaaagggagcgtgagagggagaggcagcgcagcgacgagctgaagaggaag
gactctgacacgctgaagatgctcagagtagaactcaagaaagcccaggagtcccagaaa
gagatgaagctcttgttggacatgtacaagtcggctccaaaggagcagagggacaaagtg
cagctcatggcagctgaacgtaaatctaaagctgaggtggatgagttgaggatgcgagtg
cgagagctggaggagagggagaggaaggaaagcaagaagctggcggatgaagatgccctc
aggaagatccgagtggcagaagagactattgagcatctgcagaagaaactcgctgccact
aaacaggaggaggaagccctgctgagtgagatggatgttacaggccaggccttcgaggac
atgcaggagcagaacagccgcttgttgcagcagctacgggagaaagacgatgccaatttc
aagctgatgagtgagcgaatcaaatccaaccagatctacaagctgctgaaagaggagaag
gaggagttggctgaccaagttctcacatttaaaacccaggtggatgcccagctgctggtt
gtgcagaagctcgaggaaaaagagggcgtcctgcagagcgctcttgccgctctggaaaaa
gagctgtctgtccggtcacaagcactagaactcaacaagaggaaggcggtggaggctgcc
cagctggcagaggacctgaaggtgcagctggagcacacgcaagccaagcttaaggagatc
caggtctctgtggctgagaaccgcacggcccgggagagagagagcagcaacctgaaacgt
gcacaggaggatctgtcgaggctgaggcggaagctggagaaacagaagaaggtggaggtt
tactctgacgctgatgagatcctgcaggaggagatcaaccagtacaaggccaagctgcgc
tgcccctgctgcaacacacgagacaaggagacggtgctcaccaagtgtttccacgtgttc
tgctacgagtgtctgaagatgcggtacgacacccgacagaggaagtgccccaagtgcaac
tgtgccttcggagccaacgactttcaccgcatttacatcacctaa
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