Cottoperca gobio: 115024906
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Entry
115024906 CDS
T07513
Symbol
trim65
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 65
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgob04054
]
115024906 (trim65)
Pattern recognition receptors [BR:
cgob04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115024906 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NACHT
NLRC4_HD2
SPRY
NOD2_WH
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
LRR_6
Prok-RING_4
zf-B_box
zf-RING_5
zf-RING_11
LRR_4
LRR_1
7TM_GPCR_Srsx
Prefoldin
Motif
Other DBs
NCBI-GeneID:
115024906
NCBI-ProteinID:
XP_029312633
UniProt:
A0A6J2RNY8
LinkDB
All DBs
Position
19:19974294..19996574
Genome browser
AA seq
1398 aa
AA seq
DB search
MLDMFSGSEPGSGPGSGPSCVSMKSDCSMGHPLTFKGDQPADGRMQQQRSGPGSGPGPES
GPSCVSMKSDCSMGHPLTFKGDQPADGRVQQESSEVPSDQSAPQHQTDLDSIFMLLEENI
GTFVKNELKKIQKALSPDYPECLESQREDEEVLDDEDEEQRSSXEAFLNITLHFLRSMKQ
EQLVDRLQSRTVAAECRGKLKSNLKEKFQCVFEGIAKAGNRTLLNQIYTELYITEGGAAE
VNDEHEVRQIETAARKPYRPETTIRQEDIFKPQPGRDEPIRAVMTKGEAGIGKTVLTQKF
TLDWAEDKANQDIQFTFPFTFRELNVLKEKQFSLVELVHHFFTETKEAGICRFEQFPVLF
IFDGLDECRLPLGFQHNEILTDVTESTSVNVLLTNLIRGKLLPSARLWITTRPAAANQIP
PESVDMVTEVRGFTDPQKEEYFRKRFRDEKQAGTILSHIKTSRSLQIMCHVPVFCWITAT
VLEDVLKTREGGELPKTLTELYIHFLVVLSKVKNVKYDGGTETDPHWSLKSRKMIESLRK
LAFEQLQKGNLIFYESDLTECGIDIRATSVYSGVFTQVFREERGLYQDKVFCFVHLSVQE
FLAALHVHLTFITSGVNLLSEEQTTSQLLTHLYQSAVDEALQSPNGHLDLLLRFLLGLSL
QTNQKHLXGLLTQTGSSSLTNEKTVQYIKKKMEKDLAPEISINLFHCLNELNDCSLEVEI
QQHLRSGSLSTDELSPAQWSALVFILLSSGKDLDVFDLNKYSASEEALLRLLPVVKASNK
ALLIGCKLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPHCTLESLR
LVAQRLSVREFDLRRVVHRRTGKLKHWLPHVCRGNTQQSEMSALSSEMDSQNSNLNCIIC
LERFEVPVTIPCGHTFCQKCITLHWDTKKESDIGPHCPICNEKFSTRPILKRNVSMSVLT
EAANSSSCRETSVRGSEGTTAMLLCDRHKKPLVYYCRQDKMSVCCECGISECVNHEKVLL
GTERENQEMLLKRKSKEVEKLTEETQKSISDLADNISQAKVTLEQTSSWVNTKFSTLIKI
LSEKQEAAELFIEEQREAAIAEAEARLADLEERCQELRESQGEIAAVLNLSDTDLIKEST
VIEVPRFKDIPTDVTPNLLERLNGVTDVLSRVSKLVSEDLDKAVSTAVGPDKDGSPPDKR
PVLAVVPSPAAPCHPGGKEGLSAYRCALTFDPRTANGHLSLSQENRRAEHLTSGPRPVPV
HEARFDHTWQVLCFQGFTHGQHYWELELSKPWAYLGVTYETIPRKEKGKRCMVGMNELSW
SLQLDEHQICAWHNGRREILLGPSQHSRIGMLLDYEAGTLTYYGDGQTRLHAFHCAFSRE
LFPACWIGEGVSITLCST
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatgttttctggatctgaacctggatctggacctggatctggacccagctgt
gtgtccatgaagagtgactgttctatgggtcaccctcttacctttaaaggggatcaacct
gctgatggaaggatgcagcagcagagatctggacctggatctggacctggacctgaatct
ggacccagctgtgtgtccatgaagagtgactgttctatgggtcaccctcttacctttaaa
ggggatcaacctgctgatggaagagttcagcaggagagctcagaggttcccagtgatcag
tctgccccgcagcatcaaacagacctggactccatatttatgctgctggaggagaacatc
ggcacctttgtgaagaacgagctgaagaagatccagaaggctctgagtccagattaccca
gaatgcttagagagtcagagggaagatgaggaggtgttggacgatgaggatgaagagcag
aggagcagctgagaagcatttctgaacatcacactgcacttcctgaggagcatgaagcag
gagcagctggttgaccgtctgcagagcagaactgttgctgcagagtgtcgtggtaaactc
aagtccaacctgaaggagaagttccagtgtgtgtttgagggcattgcaaaagcaggaaac
cgaaccctcctgaaccagatctacacagagctctacatcacagaggggggggctgcagag
gtcaatgatgaacatgaggtcagacagattgaaacagcagccaggaaaccatacagacca
gagacaacaatcagacaagaagacatctttaaaccccaacctggtagagatgaaccaatc
agagcagtgatgacaaagggagaggctggcattgggaaaacagtcttaacacagaagttc
actctggactgggctgaagacaaagccaaccaggacatacagttcacatttcccttcact
ttcagagagctgaatgtgctgaaagagaaacagttcagcttggtggagcttgttcatcac
ttctttactgaaaccaaagaagcaggaatctgcaggtttgaacagttcccggttctgttc
atctttgatggtctggatgagtgtcgacttcctctgggcttccaacacaacgagatcttg
actgatgttacagagtccacctcagtgaatgtgctgctgacaaacctcatcagggggaaa
ctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
cctgagagtgtggatatggtgacagaggtcagagggttcactgacccacagaaggaggag
tacttcaggaagagattcagagatgagaagcaggccggcacaatcctctcccacatcaag
acatcacgaagcctccaaatcatgtgtcacgtcccagtcttctgctggatcaccgctaca
gttctggaggatgtgttgaagaccagagagggaggagagctgcccaagaccctgactgag
ctgtacatccacttcctggtggttctgtccaaagtgaagaatgtcaagtatgatggagga
actgagacagatccacactggagtctaaagagcaggaagatgatcgagtctctgagaaaa
ctggcttttgagcagctgcagaaaggcaacctgatcttctatgaatccgacctgacagag
tgtggcattgatatcagagcaacctcagtgtactcaggagtgttcacacaggtctttaga
gaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagcgttcaggag
tttctggctgctcttcatgtccatctgaccttcatcacctctggtgtcaatctgctgtca
gaagaacaaacaacctcccagctgctaacacatctctaccagagtgctgtggatgaggcc
ttacagagtccaaacggacacctggacttactcctccgcttcctcctgggtctttcactg
cagaccaaccagaaacacctatgaggtctgctgacacagacaggaagtagctcactgacc
aatgagaaaacagtccagtacatcaagaagaagatggagaaggatctagctccagagata
agcatcaacctgttccactgtctgaatgaactgaatgattgttctcttgaggtggagatc
caacagcacctgagatcaggaagtctctccacagatgaactgtctcctgctcagtggtca
gctctggtcttcatcttactgtcatcaggaaaagatctggatgtgtttgacctgaataaa
tactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaa
gctctactgattggatgtaagctctcagagagaagctgtgaagctctgtcctcagttctc
agctcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattca
ggagtgaagctgctttctgctggactgaagagtccacattgtacactggaaagtctcagg
ttggtagcgcagcggctgtcggtgcgggaatttgacctgcggcgggtggtacaccggagg
acgggaaaactcaaacactggctcccgcatgtctgcagggggaacacacaacagtcagag
atgtctgctctttcttcagagatggattctcagaattcaaacctgaactgtatcatatgc
ctggagcgtttcgaggtccctgtcaccatcccctgcggtcacaccttctgtcaaaagtgc
atcaccctccactgggacaccaagaaagagtctgacatcggacctcattgcccgatctgc
aatgagaagttttccaccagaccgattctcaagcgcaacgtgtccatgtcggtgttgacg
gaggcggcaaacagctcctcctgtcgggagacttccgtgagggggagcgaagggaccaca
gccatgctgctgtgcgaccgccataaaaagcctctggtttattactgcaggcaggacaag
atgtctgtgtgctgcgagtgtggcatctctgaatgtgtgaaccacgagaaggtcttgttg
gggaccgaaagggaaaatcaagagatgctgctgaaaaggaagagtaaggaggtggagaaa
ctcactgaggagacgcagaaaagtataagtgatttggctgataatatcagtcaagctaag
gtgacgcttgagcagacgtcctcctgggtcaacaccaagttctccacgctgattaaaatc
ctgtctgagaagcaggaggccgcggagcttttcatcgaggagcagagagaagccgccatc
gccgaggcggaggctcgtctggctgacctggaggagcgctgccaggagctccgagagagc
cagggagagatcgccgctgtgcttaacctctccgatacagatctcatcaaggaatcaacg
gtcatagaagttccacgtttcaaagatattcccacggacgtaactccaaaccttctggaa
cgattaaacggcgtcacggacgttctgtcccgagtctccaagctggtgtcggaggacctc
gacaaggccgtgagcaccgccgtgggtccggacaaagacggttctcctccggataagagg
ccggtcctggccgtggttcccagtccagcggctccgtgccacccgggggggaaggagggc
ctcagtgcttaccgatgcgctctgacctttgaccctcgcacggccaacggtcacctgtct
ctgtcccaggagaaccgcagggcggagcacctgacctccgggcctcgccccgtccccgtc
cacgaagcccgcttcgatcacacctggcaggtgctctgctttcagggcttcacccacgga
cagcactactgggagctggagctgtccaagccctgggcgtacctcggggtgacctacgag
accatccccaggaaggagaaggggaagaggtgcatggtgggtatgaacgaactgtcctgg
agcctgcagctggacgagcatcagatctgcgcctggcacaacggccggcgggagattctg
ctcggcccctcccagcacagccgcatcggcatgctgctggactacgaggcggggacgctc
acgtactacggagacgggcagacgaggctgcacgccttccactgtgccttcagccgggag
ctgttccccgcctgctggataggagagggggtcagcatcaccctctgctccacatga
DBGET
integrated database retrieval system
