Cottoperca gobio: 115024992
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Entry
115024992 CDS
T07513
Symbol
itgb4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
cgob
Cottoperca gobio
Pathway
cgob04382
Cornified envelope formation
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04810
Regulation of actin cytoskeleton
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115024992 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115024992 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115024992 (itgb4)
04810 Regulation of actin cytoskeleton
115024992 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115024992 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115024992 (itgb4)
04515 Cell adhesion molecules [BR:
cgob04515
]
115024992 (itgb4)
04090 CD molecules [BR:
cgob04090
]
115024992 (itgb4)
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115024992 (itgb4)
Exosomal proteins of bladder cancer cells
115024992 (itgb4)
Cell adhesion molecules [BR:
cgob04515
]
Integrins
Integrin beta subunits
115024992 (itgb4)
CD molecules [BR:
cgob04090
]
Proteins
115024992 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
PSI_integrin
I-EGF_1
EGF_integrin
EGF_Teneurin
EGF_2
vWA_SIBA-E
SEA
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115024992
NCBI-ProteinID:
XP_029312804
Ensembl:
ENSCGOG00000019296
UniProt:
A0A6J2RS56
LinkDB
All DBs
Position
19:complement(20061317..20094835)
Genome browser
AA seq
1939 aa
AA seq
DB search
MGRWTLHLSVRLGLLAVLLTCCYAEVNYCFASRAKSCSECLQSGKGCAYCPDENFNGPRC
DLYKNIISHGCSAAAALTAESSMMIERNQQIDMKLSQSQVSPQQMTMSFLPGEEKLVDVE
VFSPTKGPLDLYILMDFSNSMADDLDNLKAMGKELAKLAKDLSNNFTIGFGKFVDKVIEP
QTDMRKSKLFQPWPNSDPPFSFENVIKLTKDIPFFTSELQKERISGNLDAPEGGFDAILQ
AAVCTNNIGWRDHSTHLLVFSTESAFHYESDGANVLSGILKRNDELCHLDKDDKYTEDVN
QDYPSIPTLVRLLGDHNIIPIFAVTNHSFTYYKKLQQYFPIAEVGLLQEDSANIVQIMKT
AFANIRSKMSIRTQNKPKAFETQFLSSKGSVAQYGEFVVEPGEIGRFKMLVKAQQMVNEQ
PVCQLAQDDKEGIMKVKPTTFNDGVNVKASILCPTCACENTIVSKAARCFGNGDLVCGKC
QCHEGWVSTFCNCSVSTSTNDNSQCIGPGMTEPCSGRGDCLQCGACVCYNPDQFEGPYCQ
YDKTQCQRYGGFLCNDRGSCVMGLCSCTEGWDGEACQCPKSNQTCLDGKGGICNGRGNCV
CGLCECPDSAMEMTSTCEPNFQAQLGVCEATRSCVQCQAWKTGEKKDKEDCAKCPFKIKF
VDKLKEVDKVLDSCDFRDEDDDCTYYYTVENPTDPTVKDLDVQVLKKKDCPPASLLWLLP
FLLFLLLLLALLLLCCWKYCACCKTCCQSCLALLPCCRRGRMVGFKEDEYMLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRAPNHPQALIKPNPKETIQFPLSLRLNRLFSEN
LSRPESRDAEQLRKEVSDNLNEVYKQIPGAQKVQKTSFRMQRNAGKRQDYAIMDTVLSAP
RSSYPDIVKLTEKNVQSGNVNDLKVVPGYYTVATDREAAGAVEFQEGVDSVDVHVPLFVK
DEDDDKKQLLVEAMDVPLGIAEIGKRLVHITITKEHATNIFSFLQPAYTYSRQDGVANIP
ISREIIENGRTQVTYRTKDLTAKDKKDYVNVEGDLSYGPDETQKIVPVRLLELNEKDGLL
EEKQVKQFVMDLSNPRQGAKLGRYPRTTVTITDLPEPSVMMFKKGTQNFTTSDPTYTIPV
VRTRNLDGPATVKWRTKKSQRFELAGPLKFNPGEMEKNIVIDPKAHPGSIQPETFQLELF
EPSTNASIGERKTTLVNVGGPNSPEVAQIQQKGFVNPKVTSSGGHLLSPANFKAKATGAR
NIHLNWDPPSGNTLGYKVKYWIYGDPEKEAQVIDVKTPQAELTNLYPCCDYEMRVCGYNA
MGDGYDSDMVACQTLEDVPGEPGRLAFNVISRTVTQVSWGEPAETNGDIMAYEVIYTPID
EDLKPVGTAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAMNSMGWGPFRDATINLASQPA
RPLSIPIIPDIPIVDAEAGDEYDSYLMYSSEVMKSPAGSKTPSVSGEEYTMNGKWDQNFL
FPGGSGTRNLSTSSSPMSTLSSNYRGAGGSYSTETSTTYMMGGMGGGGMGGGGGVHTTEV
IMRKRSENRGYADENIRDSIVMGDVSSKFPDLGGFGYAGMQSSSQSQFSYSLSQGTRART
ESSDVNEALYNLDRVLQDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDIQGYCV
LYQQLNGGEVQCINVSPAENSVIIQDLLPNHSYLFKVKAQSEEGWGPEREGVITIESAVD
PKSPLNPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYIVTCEQLHG
GGDVRSFQVNGDSAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGGDLS
EFNSQSMSRREVFQLPTDVSTRTNVSHTMINDPYFSDGMTMTTQHTESSGMVTRQVTKEV
VQRSVMGGTTVTKKMFYES
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctctcagtgcggctcgggcttctcgccgtcctgttgacc
tgctgttacgctgaagtgaactactgcttcgcctccagagccaagtcctgctccgaatgc
ctgcagtcggggaaaggctgcgcatactgtcctgatgagaactttaatggccctcgctgt
gacctgtacaagaatataatcagccacggctgcagcgctgcagctgcgctcacagctgaa
agcagtatgatgatagaaagaaatcaacaaatcgacatgaaactttcgcagtcccaagtg
tctccacagcagatgaccatgagctttctaccgggagaagagaagctggtggatgtggaa
gtgttttctccaaccaaaggccccctggacctttatattctcatggacttctccaactcc
atggctgacgatttggacaacttgaaggctatgggcaaagagctggctaaattggccaaa
gatctgtccaataacttcaccattgggtttgggaagtttgtggataaagtgatcgagccc
cagacggacatgagaaaatccaagctctttcagccgtggcccaacagcgaccctccgttc
tccttcgaaaatgtcatcaagctaacgaaagacattcccttcttcaccagtgagctccag
aaggagagaatatctggcaacctggatgctcctgaaggaggttttgatgccatattgcag
gctgcagtttgtacgaataatatcgggtggcgtgaccacagcacgcatctcctggttttc
tccaccgagtcggccttccactacgagtctgacggcgctaacgtgctgtcaggcatcctg
aagcgcaacgatgagctctgccacctggacaaagatgacaaatacacagaggatgtcaac
caggattacccttcaatacccacactggtccgtttactgggcgaccacaacatcattccc
atctttgctgtcaccaaccactccttcacgtactacaagaaactccaacaatacttcccc
attgctgaggtcggtttgctgcaagaagactcggccaatatcgtgcaaatcatgaagact
gcctttgcgaatatccgttctaagatgagcatccgtacacagaacaaacccaaggccttc
gagacacagttcttgtcctccaaaggaagcgttgcacaatacggggaatttgttgtcgag
cctggagaaataggcaggttcaagatgcttgtgaaagcccagcaaatggtcaatgagcaa
cctgtctgtcagttggctcaagatgacaaagagggaataatgaaggtcaaaccaacgacc
tttaacgatggcgtcaatgttaaggcctcgattttgtgtccaacatgcgcctgtgagaat
actatcgtctctaaggcagccagatgttttggcaacggagacctggtgtgtgggaagtgt
cagtgccatgagggctgggtgagcacattctgtaactgctcagtaagtacttcaactaat
gacaacagccagtgtatcggtccgggcatgacggagccgtgttccgggcgcggtgactgc
ctgcagtgtggagcctgtgtgtgctacaacccggatcagttcgaaggaccgtactgtcag
tacgacaagacccagtgtcagagatacggaggcttcctctgcaatgaccgtggctcttgt
gttatgggtctgtgttcgtgcactgagggctgggacggtgaggcctgtcaatgtcccaag
agcaaccagacctgtctggacggcaagggcggcatctgcaacgggcgaggtaattgtgtc
tgcggcctctgtgagtgtccagactctgctatggaaatgacttcaacctgtgagccaaat
ttccaggcccagttgggcgtgtgcgaggctacgaggagttgcgtccagtgtcaggcgtgg
aagaccggagagaagaaagacaaagaggattgtgcaaagtgcccctttaaaataaaattt
gtggataagctgaaagaagtcgacaaggtgcttgactcgtgtgatttccgtgatgaggac
gacgactgtacgtattactacactgtcgaaaaccctacagatccaacagttaaagacttg
gacgtccaggtgctcaaaaagaaagattgtccccctgccagcctgctgtggttgctcccg
ttcctcttgttcctcttgttactgctggcacttctgctgctctgctgctggaaatactgc
gcctgctgcaaaacctgctgccagagctgtctggcgctgctgccttgctgtaggagaggt
cgcatggttggcttcaaggaagacgagtatatgctccgccagtctctgctcacctcagac
catctggacacaccgatggtgaggaccggcccgcccaaaggaaccgatgtggttcgctgg
aaggtcactgataacgtacaccgggcacccaatcacccgcaggctctgataaagcccaac
cctaaagagaccatccagtttccgctctccctccggctaaacaggttgttctctgagaac
ctgtctcgccccgaatccagagatgccgaacagcttcgcaaggaagtgtccgataacctc
aatgaggtgtacaagcagattcctggcgcccagaaagtgcaaaaaacctcattcaggatg
cagagaaatgctggaaaaaggcaggactacgccatcatggacaccgtcttatctgctcct
cgcagcagctaccctgatatcgtcaaactcactgagaagaatgtccagtctggaaacgta
aatgatctcaaagtggtgcccggctactacactgtggccacagacagagaggctgcagga
gccgtggagtttcaggaaggcgttgattcggtggacgttcacgtgcctctctttgtcaag
gatgaagacgatgacaagaagcagcttctggtggaggccatggatgtgccgctgggcatc
gctgagattggaaaacgtttggtccacatcaccatcaccaaagagcatgccaccaacatc
ttctcgttcctccagccggcctacacctacagcaggcaagacggagtcgccaacatcccg
atcagcagagagatcatagaaaacggacgcacacaggtcacgtaccgtaccaaggacctc
actgccaaggacaagaaggactatgtgaatgtggaaggagacctgagctatggtcccgat
gagacccagaaaattgtgcctgttcgtctgctggagctgaacgagaaagatggcctcctg
gaagaaaagcaggtcaagcagtttgtcatggacctcagtaacccacggcagggcgccaag
ctgggacgctacccgagaactactgtcaccatcacagacctaccagagccaagtgtgatg
atgttcaaaaagggcacacagaacttcaccacatctgacccaacctacaccatccctgtg
gtccgtactcgcaacctggacggccccgccacagtgaaatggcgcaccaagaagtcccag
cgctttgaattagctggccctctaaagttcaatcctggagagatggagaagaacattgtg
atcgacccgaaggcccaccccggctcaatccagccagagacctttcagctggagctgttt
gaaccgagtaccaatgcttctatcggagagaggaagaccactcttgtcaatgtcggaggt
cccaactctccagaggttgcccagatacagcagaaaggcttcgtaaacccgaaagtcacc
tcctctggcggtcaccttctctcgcctgcaaactttaaggccaaagcaaccggagccaga
aacatccacctcaactgggacccaccgtccggtaacaccttggggtacaaggtgaagtat
tggatctatggcgacccagagaaagaggcacaggtcatagatgtgaagacaccccaagct
gagttgaccaacctgtacccctgttgtgactatgagatgagagtgtgcggctacaatgca
atgggagacggctacgattcagacatggttgcgtgccaaaccctggaagatgtgcctggt
gaacccggacgtctggcctttaatgtcatcagtcggactgtcacccaggtcagctggggg
gagcctgcagagaccaatggtgatattatggcttatgaggtcatctacacccccatcgat
gaggatctgaaaccagtgggcaccgctaagaaagtaaagatcgacaaccccaagaagcga
atgctgttgatcgagaacctccagagcgcccagacctaccagtacaaggttcgggccatg
aacagcatgggctggggccccttcagggatgccaccatcaacctggcatcccagcctgcc
agacctctgtccattcccatcattcctgatatccctattgtggatgcggaggcaggagac
gagtatgacagctacctgatgtacagcagtgaggtgatgaagtcccctgcaggctccaag
acacccagcgtctctggtgaagagtacacgatgaatgggaaatgggaccagaacttcctt
ttcccgggggggtcagggacgcgcaacctgtccacatcttcgtctccgatgtccacgctg
agctcaaactacagaggggccggcgggtcctactccacagaaacatccaccacctacatg
atgggaggaatgggaggtggaggaatgggaggtggaggaggtgtacacactaccgaagtc
atcatgaggaagcgctcggagaaccgggggtacgcagatgaaaacatccgagactctatc
gtaatgggagacgtgtcaagcaagttcccagatctcggtggtttcggctacgctgggatg
cagagcagctctcagagccagttcagctacagcctgtctcagggcaccagggcgcggact
gagtcttcagacgtcaatgaagccctttataacctggacagggtgctccaggatgctcga
ctttctccgggtgtaccggacactcccagcaggctggtgttttctgctctgggtcccacg
gccctcaaggtcagctggcaggagccccactgtgagaaggacatccagggctactgtgtt
ctctaccagcagctcaatggaggggaggtgcagtgcattaatgtgagcccagcagagaac
tctgtcatcatccaggacctgctgcccaaccactcctacctgttcaaggtgaaggctcag
agcgaggagggctggggtccggagagagagggagtcattaccatcgagtccgccgtcgac
cccaagagtcccctcaaccccatgccaggctcgccatttactctgagcactcccagtgcg
ccgggcccgctggtcttcacggctctgagccccgattccctgcagctcagctgggagaaa
ccccggaaacccaacggagacatcctgggatacatagtcacctgcgagcagctgcatggt
ggaggagatgtgcgctccttccaggtgaatggggacagtgctgagaccagtctgaccgtc
ccgaacctgacggagaacgtcccctacaagttcaaagttcaggctcggaccacacagggc
ttcggtcctgagagggagggcatcatcaccatcgagtctcaggacggaggcgatttgtct
gagttcaacagccaatcaatgtcgaggagggaagttttccagttgccaacagatgtcagc
acgcggaccaacgtctcccacaccatgatcaacgacccctacttctcagacggcatgacg
atgaccacgcagcacactgagtccagcggcatggtgacccggcaggtcaccaaggaagtg
gttcagaggagcgttatgggaggaaccaccgtcacaaagaagatgttttatgaatcttaa
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integrated database retrieval system