KEGG   Cottoperca gobio: 115024992
Entry
115024992         CDS       T07513                                 
Symbol
itgb4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
  KO
K06525  integrin beta 4
Organism
cgob  Cottoperca gobio
Pathway
cgob04382  Cornified envelope formation
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04810  Regulation of actin cytoskeleton
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115024992 (itgb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115024992 (itgb4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115024992 (itgb4)
   04810 Regulation of actin cytoskeleton
    115024992 (itgb4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115024992 (itgb4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgob04147]
    115024992 (itgb4)
   04515 Cell adhesion molecules [BR:cgob04515]
    115024992 (itgb4)
   04090 CD molecules [BR:cgob04090]
    115024992 (itgb4)
Exosome [BR:cgob04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   115024992 (itgb4)
  Exosomal proteins of bladder cancer cells
   115024992 (itgb4)
Cell adhesion molecules [BR:cgob04515]
 Integrins
  Integrin beta subunits
   115024992 (itgb4)
CD molecules [BR:cgob04090]
 Proteins
  115024992 (itgb4)
SSDB
Motif
Pfam: Integrin_beta fn3 Calx-beta Integrin_B_tail Pur_ac_phosph_N Ig_DSCAM-DSCAML_C PSI_integrin I-EGF_1 EGF_integrin EGF_Teneurin EGF_2 vWA_SIBA-E SEA EGF_TEN
Other DBs
NCBI-GeneID: 115024992
NCBI-ProteinID: XP_029312804
Ensembl: ENSCGOG00000019296
UniProt: A0A6J2RS56
LinkDB
Position
19:complement(20061317..20094835)
AA seq 1939 aa
MGRWTLHLSVRLGLLAVLLTCCYAEVNYCFASRAKSCSECLQSGKGCAYCPDENFNGPRC
DLYKNIISHGCSAAAALTAESSMMIERNQQIDMKLSQSQVSPQQMTMSFLPGEEKLVDVE
VFSPTKGPLDLYILMDFSNSMADDLDNLKAMGKELAKLAKDLSNNFTIGFGKFVDKVIEP
QTDMRKSKLFQPWPNSDPPFSFENVIKLTKDIPFFTSELQKERISGNLDAPEGGFDAILQ
AAVCTNNIGWRDHSTHLLVFSTESAFHYESDGANVLSGILKRNDELCHLDKDDKYTEDVN
QDYPSIPTLVRLLGDHNIIPIFAVTNHSFTYYKKLQQYFPIAEVGLLQEDSANIVQIMKT
AFANIRSKMSIRTQNKPKAFETQFLSSKGSVAQYGEFVVEPGEIGRFKMLVKAQQMVNEQ
PVCQLAQDDKEGIMKVKPTTFNDGVNVKASILCPTCACENTIVSKAARCFGNGDLVCGKC
QCHEGWVSTFCNCSVSTSTNDNSQCIGPGMTEPCSGRGDCLQCGACVCYNPDQFEGPYCQ
YDKTQCQRYGGFLCNDRGSCVMGLCSCTEGWDGEACQCPKSNQTCLDGKGGICNGRGNCV
CGLCECPDSAMEMTSTCEPNFQAQLGVCEATRSCVQCQAWKTGEKKDKEDCAKCPFKIKF
VDKLKEVDKVLDSCDFRDEDDDCTYYYTVENPTDPTVKDLDVQVLKKKDCPPASLLWLLP
FLLFLLLLLALLLLCCWKYCACCKTCCQSCLALLPCCRRGRMVGFKEDEYMLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRAPNHPQALIKPNPKETIQFPLSLRLNRLFSEN
LSRPESRDAEQLRKEVSDNLNEVYKQIPGAQKVQKTSFRMQRNAGKRQDYAIMDTVLSAP
RSSYPDIVKLTEKNVQSGNVNDLKVVPGYYTVATDREAAGAVEFQEGVDSVDVHVPLFVK
DEDDDKKQLLVEAMDVPLGIAEIGKRLVHITITKEHATNIFSFLQPAYTYSRQDGVANIP
ISREIIENGRTQVTYRTKDLTAKDKKDYVNVEGDLSYGPDETQKIVPVRLLELNEKDGLL
EEKQVKQFVMDLSNPRQGAKLGRYPRTTVTITDLPEPSVMMFKKGTQNFTTSDPTYTIPV
VRTRNLDGPATVKWRTKKSQRFELAGPLKFNPGEMEKNIVIDPKAHPGSIQPETFQLELF
EPSTNASIGERKTTLVNVGGPNSPEVAQIQQKGFVNPKVTSSGGHLLSPANFKAKATGAR
NIHLNWDPPSGNTLGYKVKYWIYGDPEKEAQVIDVKTPQAELTNLYPCCDYEMRVCGYNA
MGDGYDSDMVACQTLEDVPGEPGRLAFNVISRTVTQVSWGEPAETNGDIMAYEVIYTPID
EDLKPVGTAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAMNSMGWGPFRDATINLASQPA
RPLSIPIIPDIPIVDAEAGDEYDSYLMYSSEVMKSPAGSKTPSVSGEEYTMNGKWDQNFL
FPGGSGTRNLSTSSSPMSTLSSNYRGAGGSYSTETSTTYMMGGMGGGGMGGGGGVHTTEV
IMRKRSENRGYADENIRDSIVMGDVSSKFPDLGGFGYAGMQSSSQSQFSYSLSQGTRART
ESSDVNEALYNLDRVLQDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDIQGYCV
LYQQLNGGEVQCINVSPAENSVIIQDLLPNHSYLFKVKAQSEEGWGPEREGVITIESAVD
PKSPLNPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYIVTCEQLHG
GGDVRSFQVNGDSAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGGDLS
EFNSQSMSRREVFQLPTDVSTRTNVSHTMINDPYFSDGMTMTTQHTESSGMVTRQVTKEV
VQRSVMGGTTVTKKMFYES
NT seq 5820 nt   +upstreamnt  +downstreamnt
atggggagatggacgttacatctctcagtgcggctcgggcttctcgccgtcctgttgacc
tgctgttacgctgaagtgaactactgcttcgcctccagagccaagtcctgctccgaatgc
ctgcagtcggggaaaggctgcgcatactgtcctgatgagaactttaatggccctcgctgt
gacctgtacaagaatataatcagccacggctgcagcgctgcagctgcgctcacagctgaa
agcagtatgatgatagaaagaaatcaacaaatcgacatgaaactttcgcagtcccaagtg
tctccacagcagatgaccatgagctttctaccgggagaagagaagctggtggatgtggaa
gtgttttctccaaccaaaggccccctggacctttatattctcatggacttctccaactcc
atggctgacgatttggacaacttgaaggctatgggcaaagagctggctaaattggccaaa
gatctgtccaataacttcaccattgggtttgggaagtttgtggataaagtgatcgagccc
cagacggacatgagaaaatccaagctctttcagccgtggcccaacagcgaccctccgttc
tccttcgaaaatgtcatcaagctaacgaaagacattcccttcttcaccagtgagctccag
aaggagagaatatctggcaacctggatgctcctgaaggaggttttgatgccatattgcag
gctgcagtttgtacgaataatatcgggtggcgtgaccacagcacgcatctcctggttttc
tccaccgagtcggccttccactacgagtctgacggcgctaacgtgctgtcaggcatcctg
aagcgcaacgatgagctctgccacctggacaaagatgacaaatacacagaggatgtcaac
caggattacccttcaatacccacactggtccgtttactgggcgaccacaacatcattccc
atctttgctgtcaccaaccactccttcacgtactacaagaaactccaacaatacttcccc
attgctgaggtcggtttgctgcaagaagactcggccaatatcgtgcaaatcatgaagact
gcctttgcgaatatccgttctaagatgagcatccgtacacagaacaaacccaaggccttc
gagacacagttcttgtcctccaaaggaagcgttgcacaatacggggaatttgttgtcgag
cctggagaaataggcaggttcaagatgcttgtgaaagcccagcaaatggtcaatgagcaa
cctgtctgtcagttggctcaagatgacaaagagggaataatgaaggtcaaaccaacgacc
tttaacgatggcgtcaatgttaaggcctcgattttgtgtccaacatgcgcctgtgagaat
actatcgtctctaaggcagccagatgttttggcaacggagacctggtgtgtgggaagtgt
cagtgccatgagggctgggtgagcacattctgtaactgctcagtaagtacttcaactaat
gacaacagccagtgtatcggtccgggcatgacggagccgtgttccgggcgcggtgactgc
ctgcagtgtggagcctgtgtgtgctacaacccggatcagttcgaaggaccgtactgtcag
tacgacaagacccagtgtcagagatacggaggcttcctctgcaatgaccgtggctcttgt
gttatgggtctgtgttcgtgcactgagggctgggacggtgaggcctgtcaatgtcccaag
agcaaccagacctgtctggacggcaagggcggcatctgcaacgggcgaggtaattgtgtc
tgcggcctctgtgagtgtccagactctgctatggaaatgacttcaacctgtgagccaaat
ttccaggcccagttgggcgtgtgcgaggctacgaggagttgcgtccagtgtcaggcgtgg
aagaccggagagaagaaagacaaagaggattgtgcaaagtgcccctttaaaataaaattt
gtggataagctgaaagaagtcgacaaggtgcttgactcgtgtgatttccgtgatgaggac
gacgactgtacgtattactacactgtcgaaaaccctacagatccaacagttaaagacttg
gacgtccaggtgctcaaaaagaaagattgtccccctgccagcctgctgtggttgctcccg
ttcctcttgttcctcttgttactgctggcacttctgctgctctgctgctggaaatactgc
gcctgctgcaaaacctgctgccagagctgtctggcgctgctgccttgctgtaggagaggt
cgcatggttggcttcaaggaagacgagtatatgctccgccagtctctgctcacctcagac
catctggacacaccgatggtgaggaccggcccgcccaaaggaaccgatgtggttcgctgg
aaggtcactgataacgtacaccgggcacccaatcacccgcaggctctgataaagcccaac
cctaaagagaccatccagtttccgctctccctccggctaaacaggttgttctctgagaac
ctgtctcgccccgaatccagagatgccgaacagcttcgcaaggaagtgtccgataacctc
aatgaggtgtacaagcagattcctggcgcccagaaagtgcaaaaaacctcattcaggatg
cagagaaatgctggaaaaaggcaggactacgccatcatggacaccgtcttatctgctcct
cgcagcagctaccctgatatcgtcaaactcactgagaagaatgtccagtctggaaacgta
aatgatctcaaagtggtgcccggctactacactgtggccacagacagagaggctgcagga
gccgtggagtttcaggaaggcgttgattcggtggacgttcacgtgcctctctttgtcaag
gatgaagacgatgacaagaagcagcttctggtggaggccatggatgtgccgctgggcatc
gctgagattggaaaacgtttggtccacatcaccatcaccaaagagcatgccaccaacatc
ttctcgttcctccagccggcctacacctacagcaggcaagacggagtcgccaacatcccg
atcagcagagagatcatagaaaacggacgcacacaggtcacgtaccgtaccaaggacctc
actgccaaggacaagaaggactatgtgaatgtggaaggagacctgagctatggtcccgat
gagacccagaaaattgtgcctgttcgtctgctggagctgaacgagaaagatggcctcctg
gaagaaaagcaggtcaagcagtttgtcatggacctcagtaacccacggcagggcgccaag
ctgggacgctacccgagaactactgtcaccatcacagacctaccagagccaagtgtgatg
atgttcaaaaagggcacacagaacttcaccacatctgacccaacctacaccatccctgtg
gtccgtactcgcaacctggacggccccgccacagtgaaatggcgcaccaagaagtcccag
cgctttgaattagctggccctctaaagttcaatcctggagagatggagaagaacattgtg
atcgacccgaaggcccaccccggctcaatccagccagagacctttcagctggagctgttt
gaaccgagtaccaatgcttctatcggagagaggaagaccactcttgtcaatgtcggaggt
cccaactctccagaggttgcccagatacagcagaaaggcttcgtaaacccgaaagtcacc
tcctctggcggtcaccttctctcgcctgcaaactttaaggccaaagcaaccggagccaga
aacatccacctcaactgggacccaccgtccggtaacaccttggggtacaaggtgaagtat
tggatctatggcgacccagagaaagaggcacaggtcatagatgtgaagacaccccaagct
gagttgaccaacctgtacccctgttgtgactatgagatgagagtgtgcggctacaatgca
atgggagacggctacgattcagacatggttgcgtgccaaaccctggaagatgtgcctggt
gaacccggacgtctggcctttaatgtcatcagtcggactgtcacccaggtcagctggggg
gagcctgcagagaccaatggtgatattatggcttatgaggtcatctacacccccatcgat
gaggatctgaaaccagtgggcaccgctaagaaagtaaagatcgacaaccccaagaagcga
atgctgttgatcgagaacctccagagcgcccagacctaccagtacaaggttcgggccatg
aacagcatgggctggggccccttcagggatgccaccatcaacctggcatcccagcctgcc
agacctctgtccattcccatcattcctgatatccctattgtggatgcggaggcaggagac
gagtatgacagctacctgatgtacagcagtgaggtgatgaagtcccctgcaggctccaag
acacccagcgtctctggtgaagagtacacgatgaatgggaaatgggaccagaacttcctt
ttcccgggggggtcagggacgcgcaacctgtccacatcttcgtctccgatgtccacgctg
agctcaaactacagaggggccggcgggtcctactccacagaaacatccaccacctacatg
atgggaggaatgggaggtggaggaatgggaggtggaggaggtgtacacactaccgaagtc
atcatgaggaagcgctcggagaaccgggggtacgcagatgaaaacatccgagactctatc
gtaatgggagacgtgtcaagcaagttcccagatctcggtggtttcggctacgctgggatg
cagagcagctctcagagccagttcagctacagcctgtctcagggcaccagggcgcggact
gagtcttcagacgtcaatgaagccctttataacctggacagggtgctccaggatgctcga
ctttctccgggtgtaccggacactcccagcaggctggtgttttctgctctgggtcccacg
gccctcaaggtcagctggcaggagccccactgtgagaaggacatccagggctactgtgtt
ctctaccagcagctcaatggaggggaggtgcagtgcattaatgtgagcccagcagagaac
tctgtcatcatccaggacctgctgcccaaccactcctacctgttcaaggtgaaggctcag
agcgaggagggctggggtccggagagagagggagtcattaccatcgagtccgccgtcgac
cccaagagtcccctcaaccccatgccaggctcgccatttactctgagcactcccagtgcg
ccgggcccgctggtcttcacggctctgagccccgattccctgcagctcagctgggagaaa
ccccggaaacccaacggagacatcctgggatacatagtcacctgcgagcagctgcatggt
ggaggagatgtgcgctccttccaggtgaatggggacagtgctgagaccagtctgaccgtc
ccgaacctgacggagaacgtcccctacaagttcaaagttcaggctcggaccacacagggc
ttcggtcctgagagggagggcatcatcaccatcgagtctcaggacggaggcgatttgtct
gagttcaacagccaatcaatgtcgaggagggaagttttccagttgccaacagatgtcagc
acgcggaccaacgtctcccacaccatgatcaacgacccctacttctcagacggcatgacg
atgaccacgcagcacactgagtccagcggcatggtgacccggcaggtcaccaaggaagtg
gttcagaggagcgttatgggaggaaccaccgtcacaaagaagatgttttatgaatcttaa

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