Cottoperca gobio: 115025038
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Entry
115025038 CDS
T07513
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cgob
Cottoperca gobio
Pathway
cgob04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115025038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgob04040
]
115025038
Ion channels [BR:
cgob04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
115025038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
115025038
NCBI-ProteinID:
XP_029312870
Ensembl:
ENSCGOG00000022959
UniProt:
A0A6J2RU76
LinkDB
All DBs
Position
19:11653119..11730031
Genome browser
AA seq
1224 aa
AA seq
DB search
MTKREKFNPDPSIHISKMNVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILLWR
TLKYLWTVCCHCNAKKKTVHRINTGDGIKRIDKEDPAASEVGWMTSVKDWAGVMISAQTL
TGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIA
ANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTS
NSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQPLSYWECVYLLMVTMSTVGY
GDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGH
ITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHD
LARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLL
NIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLE
GVANEMYTEYLSSAFVGMSFPVICELCYVKLKLLLIAIEYKSDQRECSTLINPGNHMKMQ
EGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKLIYSKTAAYKKIRLACCF
DCGRSERDCSCMPVNVHCNMDSPRRDIPLSAVSVNDCSATLRASKNSYNGYIKSIEEDQQ
SALSPKKKQRNGGMRNSPNSSPKIMRHEPLLIPGNDQMESMDENVKKYDSTGMFHWCPSK
DIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHELKHIVFVG
SLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQSNIDDASLQDK
ECILASLNIKSMLFDDSIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSVTTGANIPI
ITELAPLAKPGKKVPVISFSQDKSSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQ
PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQ
TLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNSQSQ
CTKRYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIP
TTNRTNRAKSRDSRDKQKKDMVYR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagggagaaattcaacccggatccgtccatccacatatccaagatgaatgtc
atcatcccgttttcaccagatgtgccctgtgacagcaacggccagcggatgtggtgggct
ttcctcgcctcctccatggtcactttctttgggggtctcttcataatcctcctgtggaga
actctcaaatacctgtggactgtgtgctgccactgtaacgccaaaaagaagacggtccat
cggatcaacacaggcgatggcatcaaacgcattgacaaggaagacccggcggccagcgag
gtgggctggatgacctcggtcaaagactgggccggagtcatgatatccgctcagacactg
acgggaagagtcctggtggtgcttgtatttgctctcagcattggagcccttgttatatac
ttcatagattcttctgatcctatcgagtcctgtcagaacttctataaagactttacgctg
cagatcgacatggctttcaacgtgttcttcttgctctacttcggcctccgattcatcgct
gccaacgacaagctgtggttctggttggaggtgaactcggtggtggacttcttcacggtt
cctccggtgtttgtgtcggtgtacctgaacaggagctggctcggcttgaggtttttaagg
gccttaagattgatacagttctcagaaattttacaatttttgaatatactaaagacgagc
aactcgataaagctggtgaacctgtgttcaatcttcataagcacatggctaactgcagca
ggattcattcatttggtggaaaactcaggggatccctgggaaaacttccaaaattcccag
ccactctcgtactgggaatgtgtctacttgctcatggttactatgtccactgttggctat
ggagacgtttatgcaaaaaccaccctgggccggctgtttatggtcttcttcatccttggc
ggtttggccatgtttgcgagctacgtccctgaaatcatagagttaataggaaaccgcaag
aaatatggtggttcctatagtgcggttaatgggagaaagcacatcgtggtctgtggtcat
ataacacttgagagtgtgtccaactttctaaaagacttcctacacaaggacagggatgat
gtcaatgtagaaattgtttttcttcataatatttcccctaatcttgagctggaagccttg
ttcaagcgtcatttcactcaagtggagttttaccaaggatccgtcctgaacccacacgac
ctggcccgagtcaagatcgaatcagctgatgcctgtttgatcttagccaacaaatattgt
gcagaccccgatgctgaggatgcatccaacatcatgagagtaatatctatcaagaactac
catccaaagatcagaataatcactcaaatgttgcagtaccacaataaggcccaccttttg
aacatcccgagctggaactggaaggagggagatgatgctatttgccttgcagagctgaag
ctgggcttcatcgctcagagctgcctggctcagggcctctccaccatgctggccaacctt
ttttccatgaggtccttcatcaagattgaggaggacacgtggcagaagtattacctagaa
ggagtagccaatgagatgtacactgagtacctgtcgagtgcctttgtgggcatgtccttc
cctgtaatttgcgaactctgctatgtgaagctaaagctgctactgatagctatagagtac
aaatctgatcaaagggaatgcagcaccctgataaatcctggaaaccacatgaaaatgcag
gaggggacattgggcttcttcattgccagtgatgccaaagaagtaaaaagggcgctgttt
tactgtaaagcctgccacgatgacattactgatcccaaaaggattaagaaatgtggatgc
aagaaattgatatattccaagacggccgcctacaagaaaatcagactggcatgttgtttt
gattgcggccgctcagagcgggactgctcttgcatgccagttaatgtgcattgtaacatg
gactcccctcgacgcgacatcccactctctgctgtctctgttaatgattgctcagccact
ttacgtgcctctaaaaatagctataatggatatatcaaatcaatcgaagaggaccaacag
tcggcgttatcgcctaagaaaaagcaacgtaacggaggcatgagaaattctccaaactcc
tcacccaagataatgaggcatgagccactcctcatcccggggaacgaccagatggagagc
atggacgagaacgtaaagaaatacgactccacggggatgtttcactggtgcccgtccaaa
gacatcgagaaggtcatcttgacccggagcgaagcagccatgaccgttctgagcggtcat
gtggtcgtgtgcatatttggagatgtgaaatcggcattgatcggtctccgtaattttgtc
atgcctctgagagcgagcaactttcactaccacgagctgaagcacatcgtgttcgtcggc
tccctcgagtatctgaagcgggagtgggaaactcttcacaattttccaaaggtctccatt
ttacctggcacaccgttgagtcgggcagatctgagggctgtcaacatcaacctctgcgac
atgtgtgtcattctgtcagccaatcagagcaatattgacgatgcatcactgcaggacaaa
gaatgcatcttggcgtcactcaacatcaaatccatgctgtttgacgacagcatcggggtc
ttgcaggctaattcccaaggcttcacgccaccagggatggatagatcatctcctgaaaac
agcccagtccatggattagtgagacagacctctgtcacaactggagcaaatattcccatc
ataacagaacttgcgccattagcaaagccaggcaaaaaagtgcctgtgatttcattcagt
caggataaaagcagtgggaccagcatacaaatgataactgagctggtgaacgactcgaac
gttcagttcctggaccaggatgatgatgacgaccctgacacagagttatacctcactcag
ccttttgcctgtgggacagccttcgccgtcagtgtgctggattctttaatgagtgctaca
tacttcaatgacaatatcctcaccttgatccggacgttggtaacaggcggggcgacgccg
gagctggaggggctgctggcggaggagaatgcgttacggggcggctacagcacgccacag
acgctggcgaacagggacaggtgtcgcgtggcacagctggccttgtacgacgggcccttc
gccgacctcggggatggtggttgttatggtgacctgttctgtaaagccctgaaaacatac
aacatgttgtgctttggcatctatcggctacgagacgcacatctaaactcacaaagccaa
tgtaccaaacggtatgtcataacaaatccaccttatgcgtttgagctggtgccctcagac
ctgatattctgcctaatgcagtttgaccacaacgcgggccagtctcgaaccagcctctcc
cactcttcacattcgtcccattcctccagcaaaaagagctcctccgtccactctattccc
accaccaaccgcaccaaccgcgccaaaagcagggactcacgagacaaacaaaaaaaagac
atggtttacagatga
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