Cottoperca gobio: 115025429
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Entry
115025429 CDS
T07513
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115025429 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115025429 (smarcd3)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115025429 (smarcd3)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115025429 (smarcd3)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115025429 (smarcd3)
PBAF complex
115025429 (smarcd3)
GBAF(ncBAF) complex
115025429 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
115025429
NCBI-ProteinID:
XP_029313519
Ensembl:
ENSCGOG00000021683
UniProt:
A0A6J2RUA4
LinkDB
All DBs
Position
20:5061586..5093017
Genome browser
AA seq
519 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PTPVMEPSRKRPAPSQQVQQQQQQQAVQGRTRKKPVGFPGANEIPTRQMDMREPQSDPTL
GSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQQ
KRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKSLVIELD
KDLYGPDNHLVESMYGGLLLQWHRTATTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFK
LDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSE
IPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQE
IASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEE
RMAEFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggcccaccgtacggagggagcccggcggtgcggcccggcctg
cccaccccggtgatggagcccagtcgtaagaggcctgccccctcccagcaggtccagcag
cagcagcagcagcaggccgtccagggccggaccagaaagaagccagtcggattccccgga
gccaatgagatcccgacgaggcagatggacatgagagagccacaatcagatcccacgctc
ggatcaaatgctaagagaaggaaaatggcagacaagattcttccgcaaaggatccgtgag
ctggtccctgagtctcaggcctacatggatctgctggcgtttgagcgcaaactggaccag
accatcatgcgcaaacgtgtggacatccaggaagctctgaagagaccaatgaagcagcag
aagcgtaaactgaggctttacatatccaacaccttcaaccctgccagacccgacgctgat
gactcagatggcagcattgcatcgtgggaactgcgagtagagggaaagttgctggatgac
ccagggaagcagaagaagaagttctcttcgttttttaagagcctggtgatcgagctggac
aaagacctctatggtcctgacaaccacctggttgagtcaatgtatggtggtttgctctta
cagtggcaccgcacggccaccactcaggagacggacggcttccaggtgaaaaggccggga
gacgtgagcgtgcgctgcactctgctgctgatgcttgactaccagcctccccagtttaag
ctggaccctcggctggctcgcctgcttggtattcacactcagactcgctcctgcatcatc
caggccctctggcagtacgtcaagaccaacaagctgcaggactctcatgacaaggaatac
atcaactgtgacaagtacttccaacagatctttgattgccctcggctgaagttctccgag
atccctcagcgtctcactaacctcctcttaccccccgaccccatcgtcatcaaccatgtc
atcagcgtggatccaaacgaccagaagaagacggcctgctacgacattgatgtggaggtg
gaagaccccctgaagggtcagatgagcagcttcctcctctccaccgccaaccagcaggag
atcgcctcactcgacaacaagatccatgagaccatcgagtcaatcaaccagctgaagatc
cagagggacttcatgctcagtttctccagagatcccaagggctacatccaggactggctc
aaatcacagagccgagaccttaagttaatgacagacgtggtggggaaccctgaagaagag
agaatggcggagttttaccacgagccctggtcccaggaggctgtcagccgctatttctac
tgcaagatccagcagaggagacaggagctggaacaggccttagctgtccgcaacacctaa
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integrated database retrieval system
