Cottoperca gobio: 115025527
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Entry
115025527 CDS
T07513
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgob04040
]
115025527 (trpc1)
Ion channels [BR:
cgob04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115025527 (trpc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
115025527
NCBI-ProteinID:
XP_029313715
Ensembl:
ENSCGOG00000022576
UniProt:
A0A6J2RWM1
LinkDB
All DBs
Position
20:3442256..3455747
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AA seq
796 aa
AA seq
DB search
MHISVWPYSLSVVMAALYQGTDVSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNLNCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFSFLLLLNLYSLVYNEGKKNTMGPALEM
IDFLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFKN
VEDTERKNWDAFHPILVAEGLFAFANILSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKNPPKNCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLMVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacgtttcctctccggataaatttctggccttgaaagacgtgagagaggtgaaggag
gaaacaacgctggatgagaagctcttcttgctggcatgcgagaaaggtgactactacatg
gtgaagaaactgctcgaggagaaccgacacggcgagctcaacctcaactgcgtagatgtg
ctgggccgggatgccgtcaccatcaccatcgagaacgagaatctagacatcctgcagctt
cttcttgaacatggctgccaggcgacagatgccttgttggtggccatagactctgaggtg
gtgggagctgtggacatcctcctcaaccacaggccgaggcgatcctccaagccctccatt
gctaaactgatgcagcggattcagaacccagagtattccaccaccatggacgtggctcca
gtcatcctggcagcccacaggaacaactacgagatcttgactatgctgctgaaacaagac
atctcgctcccgcggcctcacgctgtgggctgcgagtgcacgctctgcaacgctaaaaac
aaaaaggacagcttacgacactccaggttccgcctggacatctaccgctgcctggccagc
ccctctctgatcatgctgactgaagaagatcccatactgagagcgtttgagctgagtgca
gacctcagggagctcagcctggttgaagtggagttcaggaatgattatgaggagctggcg
aagcagtgtaagatgtttgccaaggacctgctggcacaggctcgaaattctcgagagctc
gaagtgattcttaaccacacatccagtgaggatcacgttgacaagagaggcttactggaa
gagcgaatgaacctcagtcgactcaaactcgccatcaagtacaaccagaaagagtttgtg
gctcagtccaactgtcaacagttcctcaacaccgtctggtttggagagacggccagctac
cggcgcaaacacacgtgtctgaagatggccacggtgctgagcgtggcgatgctttggccg
ctgctctctgtctgctaccttctggtgccacgctcccgtgtgggccagattatccacacg
cccttcgtcaagttcatcatccacagcgcctcctacttctccttcctgctgctgctcaac
ctttactctctggtctacaacgagggcaagaaaaacaccatgggccctgcgctggagatg
atagatttcctgctcatcctctggatcatagggatggtgtggtcggatgtgaagcgtctg
tggtacgagggtctggaagactttctggaggagtctaggaaccagctgagctttgtgatg
aattccctttacctcgccacctttgccctcaagatagttgctcatagcaagttcaagaat
gtggaggacacagagaggaagaactgggatgccttccatcccatcttggtggctgagggc
ctgtttgcctttgccaacatcctaagttacctgcgactcttcttcatgtacaccaccagc
tccatactggggccgctacagatctccatgggtcagatgctgcaggagtttggaaagttt
ctgggcctcttcctgttggtgttattctccttcaccattggactcacccagctttatgga
aaggaccagaaagacccagacaagaatccaccaaagaactgcgagggcatattctgccag
caacagagcaatgatgcattccacacgtttatggggacctgctatgcccttttctggtac
atcttctccctggcacacgttgcgctcttcgtcacccgcatcagctacacggaggagctg
cgctcttttgtgggtgccatgatcataggcacctacaacattgtggtggttatcgtgctg
actaagctgatggtggccatgctccataaaagctttagacaaattgccaatcacgaggat
aaggagtggaagtttgctcgtgccaaactgtggctaagctactttgatgacaagtgtacc
atgcctcctccgttcaatatcctcccctcaccgaagactgtgtgctacctggtgaccagc
atgagcaagtggatctgttcgcacacgtcaaagggcaaggtgaagagacagaacagcctc
aaggagtggaagaacctgaagcagaagcgtgatgagaactatcagaagatcatgtgttgt
ctggttcaccgctacttgacctccacgcggcagaagatgcagagcacagaccaggccacg
gtggaaaatctcaacgacctgcgccaagacctctccaagtttcgcaacgagatgagggac
ctgctcggcttccggacctctaaatatgccatgttctacccacggagctaa
DBGET
integrated database retrieval system
