Cottoperca gobio: 115025637
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Entry
115025637 CDS
T07513
Symbol
rnf6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115025637 (rnf6)
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115025637 (rnf6)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115025637 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
115025637
NCBI-ProteinID:
XP_029313905
UniProt:
A0A6J2RX56
LinkDB
All DBs
Position
20:2272660..2278374
Genome browser
AA seq
716 aa
AA seq
DB search
MDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRHRLD
GAKERMSSQPRTEQRSQTADSGEQQGGSGEGEERGSGGRRGAGGTEPGAETSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHNDTADTAE
LPVTAPNSTSPSIRTASSFSHPRLSSTQRPVPYPTPRPALSRRMQTRRTRSTTTTLSMSP
PALPAPVAAPAAAQRRSATLHSLAPPPTVPNPPLGSNYTFATASLNAEMEQASDDTSASI
DCPRVSPQSGSQAPAVGHESRGSRTRSRGRARRAAAGGGISPRLSRRSRSPLHRIPVAST
TPPSSSGVSGSSIHTVEPGSGTSSVSMETVAEPTALIEPAVETGERESESHVVGAGSSAV
RRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRSERA
GIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVAPSH
TDASVTNSTTSQASRLHTNESEAGQVGTGGVDQERVGPVGSEENQGGQARLGAAVVSTTE
GRATSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQANLEG
EMGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPILAVHHD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagacgaacgacggaggcaggctgagcgtcttcgtcgggag
gaggcatactatcatttcattaatgaattgagtgaagaggagtaccgcctaatgagagac
agcaacctgctcggcacccctggggaggtgactgctgaggagcttcggcaccgtctggat
ggagcaaaagagcgcatgtcatctcagccccgtactgagcagcgctcgcagactgctgat
tctggagaacagcagggcggtagtggtgagggagaggagagagggtctggagggagacgt
ggagcagggggcaccgagcccggagcagaaacttctaatggggactcattactggagtgg
cttaacactttcagacgcactggtaatgctactcgcagtgggcagagtggcaaccaaaca
tggcgtgccgtcagccggaccaaccctaacagtggagaattccgctttagtctggagatc
aacattaaccatgatcagccagagccgggggagcataatgacactgcggacactgcagag
ctgccagtgactgccccaaactcaacttcaccctctatacgcactgcttcctctttctcc
caccctcgcctttcatctacgcaaaggccagttccataccccaccccccgcccagccctc
agtaggaggatgcagacacggcgtacccgcagcaccactaccactctttctatgagcccc
cctgcacttcctgccccagttgccgccccagctgctgctcagaggagaagtgccactttg
cactccttggcaccaccacctacggttcccaaccctcctcttggatcaaactacaccttt
gcaacagcaagtctgaatgcagagatggagcaggccagtgatgatacgtctgcttctata
gactgtccccgcgtgtcaccgcagtctgggtctcaggccccagcagtgggacacgaatca
cgtggcagtaggactcgatcacgtggccgtgcacgcagggctgctgcagggggtgggatt
tcaccacgcttgtcaaggcgcagtcgttcccccttgcacagaatacctgttgccagtacg
actccaccatcaagcagtggtgtcagtggctctagcatccacactgttgagccaggcagt
ggcacaagctctgtttccatggagaccgtggcagaacctacagctctaatagaaccagct
gtagagaccggagaacgggaaagtgaatcgcatgtagtgggagctggaagttcagcggtg
cgaaggcacccaactatcatgttggacctgcaggtcagaaggattcgacctggtgaaaat
cgcgatcgggacagcatcgccagcagaacgcgttctcgtgcccgggttgctgagaatacc
gtcacatttgaaagtgacagtggtggatttagacgcaccatctcccgctctgagcgagct
gggatccgcacctatgtgagcactatccggattccactgaggcgcatcagtgagacaggc
ctaggggaacccaactccaccgccctgcgctccatcttgcgccagatcatgaccggattt
ggggagctgagctccctaatggaaacagaggctgattctgaaactgttgcacctagccac
acagatgctagtgttacaaatagtaccaccagccaagccagtcgtctacatacaaatgag
agcgaagctggacaggttggtacaggtggggtggatcaggagagggtgggaccggtggga
agtgaggagaaccagggtgggcaggccaggctcggagcagcagtagtgagcaccacagag
ggacgagccaccagcagagacaccaacaacctggtagaaaacggtactttaccaatcctg
cgactggcgcacttcttcttgcttaatgatgaggaggatgatgaacaccctaggggcctg
accaaagagcagattgacaatctatccacacgtacctatggtcaggccaacctggaaggg
gagatgggtcgtgcgtgcagtgtttgcatcaatgagtatgcccagggcaacaagctgcgg
cgtctgccctgctcccatgaatttcacatccactgcatcgaccgctggctctctgaaaac
aacacctgccccatctgcaggcagcccatactcgcagtgcatcatgactga
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