Cottoperca gobio: 115025820
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Entry
115025820 CDS
T07513
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
cgob
Cottoperca gobio
Pathway
cgob04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115025820 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgob01002
]
115025820 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115025820 (shh)
Peptidases and inhibitors [BR:
cgob01002
]
Cysteine peptidases
Family C46: hedgehog family
115025820 (shh)
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Morphogens
115025820 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Intein_splicing
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
115025820
NCBI-ProteinID:
XP_029314153
Ensembl:
ENSCGOG00000002520
UniProt:
A0A6J2RT65
LinkDB
All DBs
Position
20:complement(3843580..3852106)
Genome browser
AA seq
413 aa
AA seq
DB search
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLEDGTNKAVKHLQSGDRVLAADDQGNPMYTEFIM
FIDQDSTTRRLFYVIETYSGQKITLTAAHLLFVGHNTTEEERMSAIFASQVQSGQKVFVF
DAERSRLEPVTVKRIYTQEHEGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWALAPVR
LAHWVSSLLFSSQPQVSAQTDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtctcatctgcttgtccctggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggt
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggcttatgactcag
agatgtaaagacaagttgaactctctggccatctcagtgatgaatcagtggcccggggtg
aagctgcgggtcaccgagggctgggacgaagacggacaccacttcgaggagtcgctccac
tacgagggcagggccgtggacatcaccacctcggacagggacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggattcgactgggtctattatgagtccaaagctcac
atccactgctctgtgaaagcagaaaactcagtggcagcaaagtcaggcggctgtttccca
ggatcctccacggtcactctggaggatgggaccaacaaggcggtcaaacacctccaaagc
ggcgacagggtcctggcagcagatgaccagggaaacccgatgtacaccgagttcatcatg
ttcatagaccaagactcgacgaccaggaggctcttctacgtgatcgaaacctactcgggc
cagaagatcaccctcaccgccgcgcacctcctcttcgtcggccacaacaccacggaagag
gagcggatgtctgcgatcttcgccagccaagtccagtccggacaaaaggtgttcgtgttt
gacgccgagcgaagtcgactcgagccggtgaccgtaaaacggatttacacgcaagagcac
gagggctcttttgcgccggtgaccgtgcaggggaccgtcgtggtggaccaggtccttgcg
tcctgttacgcagtgatcgaagaccacgacctggcgcactgggccttggcacccgtcagg
ctcgcccactgggtgtcctcgttgcttttcagttcccaacctcaagtcagtgcacagacc
gacggagtgcactggtactccaagatcctttatcaattaggaacatggctcttggacagc
cactcgatccatccacttgggatgtcagtatacccaagttga
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