Cottoperca gobio: 115025934
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Entry
115025934 CDS
T07513
Symbol
col8a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
cgob
Cottoperca gobio
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
115025934
NCBI-ProteinID:
XP_029314209
UniProt:
A0A6J2RW73
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Position
21:complement(20451785..20463472)
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AA seq
741 aa
AA seq
DB search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NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccttccctatgacactcttcttgacactgctacagcttgcggtacttatttgt
gtgagttctggggcatactatggacacaagcaacaccctcagccataccagccgatgcaa
cacctccaacacatgggcaaagaaggctttccccaacaacagtaccttggcaaagaggtg
ccctatatgcagtacccccactacaggaaggagctaccccagatgcccatgcacaagggc
aaagacaacgctcgtaaagggggcggctataatggtggccaagacaaaggtcagacaatc
cctagtggtgctgagggaattccccaaggagagcatggcccagctggaccacctggacta
gagggacctgcaggacctcctggacctccagggattgtacagcccggacctgagggacga
ccaggacctccaggtccttcaggagggcctggactgggaaaaccaggtttgccaggactg
ccaggcaagccaggaggaaatggcgaacctggaccacaaggagaaatgggcactaggggt
gaagaagggccagctggacagccagggcgtcagggtcccccaggaccacctggactacca
ggaataggtaaaccaggagtacagggattaccaggccaactagggcccaaaggagagcca
ggtcacaaaggtctgccaggactaccaggattaccgggacccaaaggagacaaagggatg
ggccagccaggacaacctggtcacaaaggtctctctgggcccccaggacctgctggccca
atagggctgcctggttttggaaaacctggtttgaatggggcaccagggccacacggacca
ccaggagagaaaggacatcctggggagctaggaccagctgggccacctggtgaaggagga
cagcctggaccaccaggtctacctggtcatggaaaaccaggtcaaaatggcctgccagga
cagccaggcatgccaggcggaaaaggtcatccaggaccaccaggtttgccaggaaagcca
ggacttcctggatttggtaaaccaggtatgccaggaccaaaaggtgacaaaggtatgggg
ggactacctggacttccagggccaaaaggagataagggctatggaggactacctggtata
cttggacctcctggaccaaatggtctaccaggtcctcaaggccctatgggaaccccagga
ggtttaggtgcacctggtcctaaaggagactgtggagaaggaggacctaaagggcttaat
ggagcccagggtaaccctggtgcctctggtatacctggtaaggatggtctgcctggagat
ctaggagagccaggaccaagaggtccaccaggaccgagtggtgccaaaggagacggtggg
cataaaggtctacctggttcctctggttctccaggacttcctggaccgaaaggacaaggt
ggattacctggtgaagtgggacctcaaggtcctaaaggaatccctggaatggatggcaca
gcaggaccaatcgggccttctggtcttcccgggataaaaggagatagtggcctacctggc
ccaccaggcattgccggtgaggggaatttaggtcttcctggtcctataggaccccgaggg
aaagagggctcatcgggaccccctggacaaccaggtaaacctggtcttcctggaccacca
ggcccagctggagcatctggtctgtctcctgagatggctggagtgctctctcagatgggc
cctgcactagatggtgttaaggctggtggctatggtaagaagggcaagtatgaaggcaat
ggggctgaagtaatgggtgccagtgggttggaaatgccagcattcacagctctagtaaca
actccctttccacctgtgaacactccagtcgtctttgacaagctcttgtacaatggtcgt
caaaactacaaccccgagacaggaatcttcacttgtgacatgcctggcatttattacttt
gcctaccacgttcattgcaaaggagctaatgtgtgggtggctttgatgaggaacaatgag
ccagtgatgtatacatatgatgaataccaaaagggtttcctggatcaagcatcagggagt
gcagtactacctctacaacctggggacactgtgtatattcagctgccctcagatcaggct
gcaggactttatgctggacagtatgtgcactcctcattttccggatatttgttatatcca
atgtaa
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