Cottoperca gobio: 115025988
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Entry
115025988 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04518
Integrin signaling
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115025988
04518 Integrin signaling
115025988
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115025988
09142 Cell motility
04820 Cytoskeleton in muscle cells
115025988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115025988
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115025988
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115025988
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115025988
Hyaluronan
Extracellular matrix or blood plasma proteins
115025988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
ParC-like
fn3
FN3_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
115025988
NCBI-ProteinID:
XP_029314302
UniProt:
A0A6J2RXV8
LinkDB
All DBs
Position
21:complement(4392528..4418273)
Genome browser
AA seq
3144 aa
AA seq
DB search
MLILLNGGRSFDNVDTPASALKQQGIFVIGIGTRSSDSGELKKISYDPRYALSVSEFTDL
PSVQEQLSSVMSTVLVRATPMTPKETVERQPPGRDVVFLLDGSDGTRTGFPAMQDFVQRI
VEKLRVDDNQDRVSVVQYSRDPAVNFYLNTYTTKGEILDTVRGLRHKGGRPLNTGAALQY
LRDNVFTASAGSRRLEGVPQVLILLSGGRSFDSVDAPASALKQLGVLTFAIGTRSSDSRE
LEKISNDPNYVLSVSEFTDLPSIQQQLQSSVEAVVIEDTPETPTVLVDTAKKDIVFLLDG
SDSTRNGFPAMRDFVERVVEKLNVGGNKDRVSVVQYSRDAEVNFYLKTYTTREDIVDSVR
GIKHKGGRPLNTGAALQYVRDNVFTNSSGSRRLQGVPQMLILLNGGRSFDNVDTPASALK
QQGIFVIGIGTRSSDSGELKKISYDPRYALSVSEFTDLPSVQEQLSSVMSTVLVRATPMT
PKETVERQPPGRDVVFLLDGSDGTRTGFPAMQDFVQRIVEKLRVDDNQDRVSVVQYSRDP
AVNFYLNTYTTKGEILDTVRGLRHKGGRPLNTGAALQYLRDNVFTASAGSRRLEGVPQVL
ILLSGGRSFDSVDAPASALKQLGVLTFAIGTRSSDSRELEKISNDPNYVLSVSEFTDLPS
IQQQLQSSVEAVVIEDTPETPTVLVDTAKKDIVFLLDGSDSTRNGFPAMRDFVERVVEKL
NVGGNKDRVSVVQYSRDAEVNFYLKTYTTREDIVDSVRGLKHKGGRPLNTGAALQYVRDN
VFTNSSGSRRLQGVPQMLILLNGGRSFDNVDTPASALKQQGIFVIGIGTRSSDSGELKKI
SYXPSLCSIVSEFTDLPSVQEQLSSVMSTVLVRATPMTPKETVERQPPGRDVVFLLDGSD
GTRTGFPAMQNFVQRIVEKLRVDDNQDRVSVVQYSRDPAVNFYLNTYTTKGEILDTVRGL
RHKGGRPLNTGAALQYLRDNVFTASAGSRRLEGVPQVLILLSGGRSFDSVDVPASALKQL
GVLTFAIGTRSSDRRELQKISHDPSFALSVSEFTDLPSIQQQIQSSVEGAIIGFSPESPA
ETQGPRKDVVFLVDGSDGVGREFPIIQEFIRRVVESLNVGENKIRIGVVQYGDFAQTDMF
LNTHTTKEGVLNAVRGMRQRGGRQRNLGQALQFVSQDVLTAARGSRKQEGVPQFVIVVSS
GSSTDDISSAASSLKQSRVLPFSIGTRDVNPTELQVVSYIPNFAFSVDDLPGLYTVQENL
ITTLTELSDDDINRMRPVFPIIDVIPSVATGGEKRDVVFLIDGTTAMRSEFPSIREMIRR
VVDELDVGLDKVRISVVQYSDDAKPEFLLNGLSTKDEVRNAVMKLRSKGGNRLNTGRALE
WVYSNIYQRSAGSRIEEGVPQFLILVTGGKSSDDVSTAADQLKRNRVAPLAIGSRNADPD
ELKQISLRPDLVYTVDSFQQLPMMESQLIDSVKTISTTDIINTYVTSTVDLGNVNLGRKD
IIFLIDGSDNTGAAGIAHIRDFIHNIVQQLDVQPDQVRVAVVQYADRVQPEFSLNTHNDK
SAVVSAVKRLRQMGGRSSDLADAIEYVIKNELKPSAGVRLAKASQHLVVLTGGRSPQDVS
IYGPLLKGSRVNCIGVGAAGADTRQLTQIATTSADVLQVPDFTGLPTIRQEVIDRLNGTI
TEEPPTDYIPSGLPPPKNADIVFLVDGSINLGRDNFNAVMLFINELIDLFFNERDNLRIG
FAHYTTDVTDVFYLNTYKNKQDIVNAIGRTEYKGGRKINTGAAIRHIQDVHFTKEKGSRM
DEGTPQILMVLTGGRSADDGKTAALGLKKKGVRVYAVGVGDIENELEDLASESSTVARAS
TYLKLSELNEQILETLDDEVKGRLCVSVQETSKTCNIEVLVGFDVSAQNIFSVQTNFKIK
MEAILSTISKMAAISCSSGQIPSVQIGMLAMDSASEPVQLDFTENAEVLFKAFEALRSSG
PFVLNGKTISAYTNRFKTRQKDVVKVVVHLTDGIDAPYAELKKRVDELRLSGVNSFILVG
LERVPKFEEALLLEFGRGFRYTRPLRLNILDLDYELMEELDNIAERECCAVPCKCTGTRG
NRGAVGLSGSKGGPGSPGSQGHPGDEGGPGERGHPGVNGTQGFQGCPGQRGVKGSRGYSG
EKGEFGEIGLDGINGPEGKSGVAGPSGDLGNSGRRGPKGTKGQSGGIGEMGIRGDPGTSG
QDNSRAGPKGDPGDAGPAGEPGEDGKKGGPGEVGRIGANGRRGPPGKAGNPGKTGADGVQ
GEAGIGGSRGPSGPNGAPGPRGEDGNPGPRGPGGSPGSAGDKGRRGALGRKGEPGDSGPK
GVIGPLGPRGEPGEDGRDGFGVIGSNGRKGDEGFPGFPGIKGAAGDSGTTGGPGPTGNHG
QRGVSGNIGTPGQEGEVGHPGPYGEKGPRGPGVVQCDLVKKIRDNCPCCYGQQECPLYPT
ELAFVLDASEGVDQPAFNNMRDTVLRLVKDITISESNCPRGARVAVTLYNDEVTTEVRFA
DAMKKRALVQRIEGLQTLKTSKQRSLETAMSFVAQNTFKRVRSGFLIRKVAVFFVGGTVS
RVQAVTNAALRLHDAGIATLFLVNRDDRTLSKAVQVNNTALAQIIVLPNPGSAQYDSLIQ
KVMNCHVCLDVCSPDQVCDYLPPSGSRLRRTSTTDVDIDMAFVMDSSESTYPTVFTEIKR
YIAHIVEQLQVSSNPTSSIHHARVSVIQQAPYEFLNNKTGSSIRVDIGLTEHHSAQDIVK
FLLEKTPQLEGGRALAAAIESTVEQVFEKAPLQRDRKVLMLFVTGSVEEEEEQLVRIATE
VKCRGYFLVILGVGEKLSAGDARVLSRMASEPSDVFFKRLDSASHFYDKHIQTFGQLLPK
YISIENAFYMSPEVSKNCKWFQSDQPLKNPFSSSHQQEKHQKPHENQQAVHQRKHNDADE
LHVSNVTSSSLKLRWTSSDSKLFVYFEVVVTRLHDHALVLKTNVSGSELSVDNLESAQTY
HAVVTAHTAEGQTVSIRKGIMTTKAAEHKPASRGSSTVNTTPLDQPETVPESQPKVEQQV
EQVEILPDPAASTAVDICQLLKEEGTCAKFVLKWHFDALSKSCTRFWYGGCGGNQNRFDT
HQQCVKACGKPEPLNQGVVAAIRT
NT seq
9435 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcctgctaaatggtggaaggtcttttgacaatgtagataccccagcttctgct
ctcaaacagcagggcatctttgtgattggcattggaaccaggagctctgacagtggagag
ctgaagaagatatcatatgaccctcgttatgctctatcagtgtctgagtttactgacctc
cccagtgtccaagaacagctctcgtctgtaatgagcacagtgttagtgagagctacgccc
atgacaccaaaagaaactgtggagagacagccaccaggaagggatgttgtgttcttgttg
gatggatctgatggtactagaactggattcccagctatgcaagactttgtccaaagaata
gtagagaagctcagagtggatgacaaccaagaccgtgtttcagtggttcagtacagcaga
gatccagctgtcaatttctatctgaacacatacacgacaaaaggcgagatccttgacact
gtcagaggtttgaggcacaaaggcggaagacccctcaacactggagcagctctccagtac
ttgagggataatgtcttcacggcctctgccggaagcaggcgcctggaaggagttccacag
gtcctgatattgctaagtggtggaaggtcttttgacagtgttgatgcaccagcctctgct
ctcaaacaactgggtgtcctgacctttgcaattggaaccaggagctctgatagtagagaa
ctagagaagatatccaacgatcccaattatgttctatctgtgtctgaattcactgacctt
ccaagtatccaacagcaacttcagtcctcagtggaggctgtggttattgaagacacccca
gaaacaccaactgtacttgttgacactgccaaaaaggatattgtattccttctggatggt
tctgatagcacaaggaatggcttccctgccatgcgtgattttgttgagagagtggtggag
aaactcaatgtgggagggaacaaagaccgtgtctctgtagtgcagtacagcagagatgca
gaggtcaatttctacctgaaaacatacaccacaagagaggatattgtggattcggttaga
gggataaaacacaaaggaggcagacccctcaacaccggggctgccctccaatacgtcagg
gataacgtctttacaaactcctccgggagtaggcgcctgcaaggtgttccacagatgttg
atcctgctaaatggtggaaggtcttttgacaatgtagataccccagcttctgctctcaaa
cagcaaggcatctttgtgattggcattggaaccaggagctctgacagtggagagctgaag
aagatatcatacgaccctcgttatgctctatcagtgtctgagtttactgacctccccagt
gtccaagaacagctctcgtctgtaatgagcacagtgttagtgagagctacgcccatgaca
ccaaaagaaactgtggagagacagccaccaggaagggatgttgtgttcttgttggatgga
tctgatggtactagaactggattcccagctatgcaagactttgtccaaagaatagtagag
aagctcagagtggatgacaaccaagaccgtgtttcagtggttcagtacagcagagatcca
gctgtcaatttctatctgaacacatacacgacaaaaggcgagatccttgacactgtcaga
ggtttgaggcacaaaggcggaagacccctcaacactggagcagctctccagtacttgagg
gataatgtcttcacggcctctgccggaagcaggcgcctggaaggagttccacaggtcctg
atattgctaagtggtggaaggtcttttgacagtgttgatgcaccagcctctgctctcaaa
caactgggtgtcctgacctttgcaattggaaccaggagctctgatagtagagaactagag
aagatatccaacgatcccaattatgttctatctgtgtctgaattcactgaccttccaagt
atccaacagcaacttcagtcctcagtggaggctgtggttattgaagacaccccagaaaca
ccaactgtacttgttgacactgccaaaaaggatattgtattccttctggatggttctgat
agcacaaggaatggcttccctgccatgcgtgattttgttgagagagtggtagagaaactc
aatgtgggagggaacaaagaccgtgtctctgtagtccagtacagcagagatgcagaggtc
aatttctacctgaaaacatacaccacaagagaggatattgtggattcggttagagggcta
aaacacaaaggaggcagacccctcaacaccggggctgccctccaatacgtcagggataac
gtctttacaaactcctccgggagtaggcgcctgcaaggtgttccacagatgttgatcctg
ctaaatggtggaaggtcttttgacaatgtagataccccagcttctgctctcaaacagcag
ggcatctttgtgattggcattggaaccaggagctctgacagtggagagctgaagaagata
tcatactgaccctcgttatgctctatcgtgtctgagtttactgacctccccagtgtccaa
gaacagctctcgtctgtaatgagcacagtgttagtgagagctacgcccatgacaccaaaa
gaaactgtggagagacagccaccaggaagggatgttgtgttcttgttggatggatctgat
ggtactagaactggattcccagctatgcaaaactttgtccaaagaatagtagagaagctc
agagtggatgacaaccaagaccgtgtttcagtggttcagtacagcagagatccagctgtc
aatttctatctgaacacatacacgacaaaaggcgagatccttgacactgtcagaggtttg
aggcacaaaggcggaagacccctcaacactggagcagctctccagtacttgagggataat
gtcttcacggcctctgccggaagcaggcgcctggaaggagttccacaggtcctgatattg
ctaagtggtggaaggtcttttgacagcgttgatgtaccagcctctgctctcaaacagctg
ggtgtcctgacctttgcaattggaaccaggagctctgatcgcagagaactgcagaagata
tcccacgatcccagttttgctctatctgtgtctgaattcactgaccttccaagtatccaa
cagcaaattcagtcctccgtcgagggtgctatcattgggttctctccagaatcacctgct
gagacgcagggccccaggaaggatgtcgttttccttgttgatggatctgatggtgttgga
cgggaatttccgatcatccaggagtttatccgcagggtcgtggagagtctcaatgttggc
gagaacaagatccggattggtgtggtccagtatggtgactttgctcaaacggatatgttt
ctgaacacacatacaaccaaagaaggtgttttgaatgctgtcaggggaatgaggcagcga
ggaggaagacaacgtaacctgggtcaggccttgcagtttgtcagtcaggatgttctgaca
gcagcccgtggtagcaggaagcaagagggtgtaccgcagtttgtaattgtcgtctccagt
gggtcttctacagatgacatcagcagtgcagcatcttccctcaaacaatctagagttctt
cccttcagcattgggaccagggatgttaaccctacagagctccaggtggtgtcatacata
cctaactttgccttcagtgtagatgacctccctggcctatacacagtccaagaaaatcta
ataaccactctcactgagctgtcagatgatgacatcaaccggatgcgtccagtattccca
atcattgatgtaatcccatcagtagccacaggaggagaaaagagggatgtcgtatttcta
attgatggcacaacagcgatgcgtagtgagttcccttccatccgtgaaatgataagaaga
gttgtggatgaactggatgtaggattggataaagtccgaatttcagtggtacagtacagt
gatgacgcaaagccagaatttcttctgaatggattatccaccaaagatgaagtacgcaat
gctgtaatgaaacttcgaagcaaaggagggaaccgtctaaacacaggtcgtgctcttgag
tgggtctacagtaacatctaccagaggtcagcgggaagccgcattgaggaaggtgtgcct
caattcctcattctagttacaggtggcaaatcctcagatgatgtatccaccgcagctgac
caacttaagagaaaccgggttgcacctcttgcaattggttcaaggaatgcagaccctgat
gaactgaaacagatttccctgagacctgatctggtatacacagttgacagtttccagcag
cttccaatgatggagtcgcagctcattgattcagtcaagacaatatccaccactgacatc
atcaatacttatgttacttctacagtggatttaggcaatgtaaatcttgggagaaaggac
attatcttccttattgatggctcagacaatacaggtgctgctggaattgcgcatatccgt
gatttcatccacaacattgtccaacaactcgatgtgcagcctgaccaagtgcgcgttgct
gttgtccagtatgcagacagagttcagcccgagttctcactcaacactcacaacgacaag
tcagcagttgtctctgctgtcaaaagacttcgtcagatgggtggccggtcatcagatctg
gccgacgccattgagtatgttataaagaatgagttaaaaccctctgctggtgttcgtcta
gctaaggcctcccagcatcttgtggttctcacaggtgggcgttccccccaagatgtttcc
atctatggacctctgcttaagggctctcgagtcaactgtattggtgttggagctgctggt
gctgatacaaggcagctcacccaaattgccaccacctcagctgatgtccttcaggttcct
gacttcactggcctgccgacaatccggcaggaggttattgacaggttgaatgggaccatc
actgaggaaccacctacagactatattccatcaggcctgcctccacctaaaaatgctgat
atagtgtttttggtggatggttccattaacttgggcagggacaacttcaatgcagtgatg
ttgtttatcaatgagctaattgatctgttcttcaatgagagagacaacctgcggattggc
tttgcacattataccacagatgtgactgacgtcttctacctcaacacatacaagaacaag
caagacatcgtaaatgccattggccgaacagagtacaaaggaggacgtaaaatcaacact
ggtgcagctattcgccacattcaagatgttcactttaccaaagaaaaaggtagtaggatg
gatgagggcactcctcagatcctaatggtactcactggaggacgttcagctgatgatggc
aaaacagcagcccttggtctaaagaaaaaaggtgtgagagtctatgctgtaggagtgggc
gacattgagaatgaattagaagacctagcaagcgagtcctccactgtggctagagcaagc
acctatctgaaactttcagagctgaatgagcaaatcttggagactttggatgacgaagta
aaagggaggttgtgtgttagtgtacaagaaacttctaaaacctgcaacatagaggtgttg
gtgggttttgatgtttctgcccagaacattttcagtgttcagaccaacttcaaaatcaag
atggaggccattctgagtacgatttccaaaatggcagctatcagttgctcatctgggcag
attccctccgtgcaaattggcatgttggccatggactctgcctctgagcctgtccagctg
gacttcaccgaaaatgctgaggtactctttaaggccttcgaagccctacggagtagtggc
ccctttgtccttaatggaaagaccatctcagcgtacaccaataggttcaaaaccaggcag
aaggacgttgtcaaggttgtcgttcatctgactgatggtattgatgccccatatgctgaa
ttaaaaaagcgagttgatgagcttcggctctcaggagtgaacagtttcatcctggttggg
ctggagcgggtgcccaaatttgaggaggctttgctgctagaatttggtcgtggattcagg
tacaccagacccctgcgactcaatatcctggacttggactatgagctaatggaagagctg
gacaatattgcagagagggagtgctgtgcagtgccgtgcaaatgtactggcaccagagga
aaccgaggagcagttggactttcagggtcaaagggtggtccaggatcaccaggaagccaa
ggacatcctggagatgagggtggacctggagagagaggtcatcctggtgtgaatggcact
cagggtttccagggatgtcctggacaaaggggtgtcaagggttctcgtggctactcagga
gaaaagggtgaatttggagaaattgggcttgatggcatcaacggaccagagggcaaaagt
ggagttgctggaccgtcaggagacttaggaaactctggcagaagaggtcccaaaggtacc
aaaggacaatcaggaggcataggagaaatgggaatcagaggagaccctggtacaagtgga
caagataacagccgtgcaggacctaaaggagaccccggtgatgctggaccagcgggagag
cctggtgaggatggaaagaagggaggccccggtgaagtcggaagaattggagctaatggc
agaagaggcccacctggaaaggccggaaatcccggaaagacaggagctgatggtgttcag
ggagaggcgggtattggaggatctagaggtccatctggaccgaatggtgccccaggaccc
agaggagaagatggaaacccaggacctaggggtcccggaggtagcccaggttccgctgga
gataagggtagaagaggagctcttggtcgcaagggtgagccaggagattcaggacctaag
ggtgttattggaccacttggtccccgtggagagcctggtgaagatggcagagatgggttt
ggcgtcatagggtctaatggacgaaagggtgatgagggcttcccaggattcccaggaata
aagggagcagctggggactccggcaccacgggcggacctggacccacaggaaatcatggt
cagaggggtgtctctggtaatattggtacacccgggcaggagggagaggttggacatcct
gggccatatggtgagaaaggaccgagaggaccaggtgttgtgcaatgtgacctggttaag
aagatcagagataactgcccttgctgttatggtcagcaggaatgcccgctctaccccact
gagctggcctttgtcctggatgcctctgaaggcgtagaccaaccagctttcaacaatatg
cgtgacacagtcctgcgtctagtcaaagacatcaccatctctgagagtaactgtccaaga
ggtgctcgtgttgctgtaaccctgtacaacgacgaagtgaccactgaggtccgctttgct
gatgcaatgaagaaacgtgccctggtgcagcgcatcgagggactgcagaccctgaaaacc
agcaagcagcgcagcttggagacagcaatgagctttgtggcccaaaacacctttaagaga
gtgcgcagtggcttcctcataaggaaggtggccgtcttctttgtcggtggaacagtcagt
cgggtacaagcagttactaatgcagctcttcgcctccatgatgctggaatcgccaccctg
ttcttggtcaaccgtgacgacagaacactcagcaaagcagtgcaggtcaacaacacagca
ctggcccagataattgtccttcccaaccctggaagtgcacagtacgattctctcatccaa
aaggtgatgaactgccatgtctgcctagacgtctgctctccggaccaagtctgcgattat
ttgcccccgtctggcagccgtcttaggaggacttccaccacagatgtggacatcgacatg
gctttcgtcatggacagctctgagtctacctacccaaccgtctttactgagattaaacgt
tacatcgcgcacatagttgagcagctgcaagtgtcttcaaatcccacatcatccattcac
cacgccagagtgtctgtgatccagcaagcaccatatgagttcctcaacaacaaaactggc
tcttccatccgtgtggatatcggtttgaccgagcaccactcagctcaggatattgtcaaa
tttctgctagagaagacgccgcagttagagggtggccgggcactggcagcggctatcgaa
tcgaccgtggagcaggtgtttgagaaggcgcctctccagcgtgacaggaaagtactgatg
ctctttgtgacaggaagtgtggaagaagaagaagagcagctggtgcgtattgccactgag
gtcaagtgcagaggctacttcctggtcatcctgggtgtgggtgagaagctgagtgctgga
gacgctcgtgtcctgtcacgcatggccagtgagccatccgatgtcttcttcaagcggctg
gacagcgcctcacacttttatgacaaacacatacagacctttggccagctgctgccaaag
tatatcagcattgaaaatgctttctacatgtcccctgaagtgtccaaaaactgcaagtgg
ttccagagtgaccagccactcaaaaacccattttcatcatcacatcaacaggagaaacat
cagaaacctcatgaaaaccaacaggcagttcatcaaagaaagcacaatgatgcagatgag
ctacacgtctctaacgtcacctccagcagcttaaagttgcgttggaccagctcagactcc
aagctcttcgtctactttgaggtagtggtgacgcggttgcacgaccatgccttggtgctg
aagaccaacgtgtcgggctcagagctctcggtggacaatctagagagcgctcaaacatat
catgctgtggtcaccgcccacactgcagagggacaaactgtctccatccgcaaaggcatt
atgactaccaaagcagcagagcataagccagccagccgaggcagcagcactgtaaatacc
acaccactagaccaaccagagactgtgccagagtctcagccaaaagtggagcagcaggtt
gaacaggtggagatcctcccggatcctgcggcctctacagccgtggacatttgccagctt
ctcaaagaggaaggtacttgtgccaaatttgtccttaagtggcactttgatgccctcagc
aagagctgcacacgcttctggtatggaggctgcggtggaaaccagaatcgctttgacacg
catcagcaatgtgtgaaggcttgtggaaaaccagaacccctcaaccaaggagtcgtcgct
gcaataagaacatag
DBGET
integrated database retrieval system
