KEGG   Cottoperca gobio: 115026072
Entry
115026072         CDS       T07513                                 
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
cgob  Cottoperca gobio
Pathway
cgob03082  ATP-dependent chromatin remodeling
cgob03083  Polycomb repressive complex
cgob04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115026072
   03083 Polycomb repressive complex
    115026072
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    115026072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgob03036]
    115026072
Chromosome and associated proteins [BR:cgob03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     115026072
  Histone modification proteins
   HAT complexes
    HATB complex
     115026072
   HDAC complexes
    Sin3A-HDAC complex
     115026072
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     115026072
    PRC2.2
     115026072
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     115026072
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115026072
  Chromatin remodeling factors
   NuRD complex
    115026072
   NuRF complex
    115026072
   NuRF complex (fruit fly)
    115026072
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N MIOS_WD40 NBCH_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 115026072
NCBI-ProteinID: XP_029314533
Ensembl: ENSCGOG00000004394
UniProt: A0A6J2RUA6
LinkDB
Position
3:2570386..2579898
AA seq 427 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYNKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSSTTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctgacaaagaggtgtatgacgatgctgtggaggaaagggtcatcaatgaagagtac
aagatttggaagaaaaacacacctttcctgtatgacctggtgatgactcatgcgctggag
tggcctagcctgactgtccagtggcttccagatgtcagcaggccagaggggaaggactac
gccgtccacaggctggttttggggacccatacatcagatgagcagaaccaccttgtgatt
gccagcgttcaggtaccaaatgatgatgcccagtttgatgcctcgcactacgacagcgaa
aaaggagcagagtttggtggatttggttccgtaagtgggaaaatcgagattgagatcaag
atcaaccatgagggagaggtcaacagagcccgctacatgccccagaatcactgcatcatt
gccaccaagactcccacctccgacgtgctggtgttcgactacaataagcacccgtctaag
ccagatcccagtggggagtgtagtcctgacttaaggctgaaaggtcaccagaaagaaggg
tatggcctctcctggaatcccaacctcagcggcaacctactcagtgcctctgatgaccac
accatctgtctatgggacatcggggccggcccaaaggaagggaagatagtggatgccaag
accatcttcaccggccacacagcagtggtggaagatgtttcctggcatttgctccacgaa
tccctgtttggctcagtggcagacgaccagaaactcatgatatgggacactcggtccagc
accacgtccaaagccagccactcagtcgatgctcacactgctgaggtcaactgtctgagc
ttcaacccctacagcgagttcattcttgccactggttcggctgataagactgttgcactc
tgggatctaaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaatt
ttccaggtccaatggtctcctcacaacgagaccatcctggcctccagtggcaccgaccga
cgtctcaacgtctgggatctcagtaaaattggggaggagcagtctgcagaagatgctgag
gacggtccaccagagctgctgttcatccatggtggccacacagccaagatctctgacttc
acctggaaccccaatgaaccctgggtcatctgctccgtgtcggaggacaacatcatgcaa
gtctggcagatggcggagaatatctacaatgacgaggagccagacaacacccctgcttca
gaactggaggctcagggatcataa

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