Cottoperca gobio: 115026084
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Entry
115026084 CDS
T07513
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
cgob
Cottoperca gobio
Pathway
cgob04517
IgSF CAM signaling
cgob04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115026084 (lmo7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115026084 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115026084 (lmo7)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115026084 (lmo7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
LIM
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115026084
NCBI-ProteinID:
XP_029314554
UniProt:
A0A6J2RXA1
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All DBs
Position
21
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AA seq
1483 aa
AA seq
DB search
MEWREQSAVSCDEAYLEAQRWIEAVTKQKLGSDDFRSALENGVLLCDLINKIKPGIIKRV
NRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IYWLGRRAQCERFYDGPYLNFKAFEGLLGTALYKTLQESSSQKGSNVRDSGFGDSWYSER
EELFQLRGEVGGGGGGHRRDDSLDSLDSLGSQPQSISSDTTLKGSSEGCCSDTEADSVFR
MAENKDSLSYRRSVTITPKASSQFNQFLPTKNKPSAYVPAPLRKKRAERNEDSRRSWANP
TYTEDEGRLTRQCQTQESIDGSKSTSDIQVNPTVVRQVLHEELQKRREEIKDSDDRWQDD
LSKWKNRRRSVNSDIVKKKEEREKIEDITISSNRRSKTFKEMQEERENKGKDSVGSRFGS
LSYLDDDEVFDRPVITPRIRNHPRSYTIDTPYYSSETPEASLKEDEPPAASPATGRAASP
PTSRKVDILDSPAGSYATTTITPAITPAITPAITPTSRRFFNSSQSSAAAPLQRGPVSDR
TVKTEETTTIVSSSSSVQKVPEPRRPLSSTQTELGAPSSGVLYKQQPQPSSMEPKPPGVS
RVSASLPRSYQRSDSARLTSVVTARPFGTQSSRLTSLPRAFAADNAQKRVNGDADVPKKP
SVPSRYHQFMTSEDENHSQSSSVHSSEDEEEEENKTTGKSITSTQSVSPVPPHFKSEVSP
APAKEISEEKYSEMRISLNQKPNSSRDFGFQAVWDSTGARVTTIQPGSPAEMCQLQVGDE
VLTVNGHKVAEMSYTDWKSCMEEAIQEGNLVMDIRHYGKNNWDRDQPSLPFKSHKIINLT
SMDHPILLGSPDTNTVSSSLDFTSRSSVEKLPSKDAPAHPVVDVASNGVNGGFREQQVTM
RNKESETISLKNLKRRSEFFEKGGSDSAMPDIPVPSITPSSSRWSWDPEEERKRQEKWQK
EQERLLQEKYKRDQEKLQEEWLKDQEEVANSVDQQEPWSLEVNRHSISPHSPRSPVNLHT
SPTWEEEERKRKAEQELERQKQVEEQERQRQVEEQDRQRQAEVQERQRQAEERRKREEEE
RELQRLQEERKRKERQMEEERKRREEEELMWQRRREEEREEEERRRQEAAEQQRRERERA
LQQQQQWAGDSHGFSNIQPSLSFTDRIRSQSSPQLDEEEKPKGVHGQPGGMAHWLLEEQV
RSARDKQTPSQRAASELEMERRNILNAMRYREPERVTGSGVGEMKGRTSVSQAEQERQQI
LNEMKKKTPMLRDKSWIRQGSSTIATNKESDVPPMRRGESLDNLDASKNSWRSSWTPRSN
SYIQNYTGPQSALSGNTSSYGGGLGSKRPVSSILPSSYSMGSLRGGAGTPSSPWSRQSSS
PTPSSPSPTTSPEPTSEAGDPQQRSRSVSGKKICTFCDTPLGKGAAMIIESLGLCYHLSC
FKCIDCKSGLGGSEAGAEVRIRNKQLHCNSCYMRFKAGLPTSM
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgcgagcagtccgctgtcagctgtgacgaggcttacttggaggcacagaga
tggattgaggcagtaaccaagcaaaaacttgggagcgacgacttccgatcagcgctggag
aatggagttctgttgtgtgatctgatcaacaagatcaagcctggcatcataaagagggtt
aacaggcttcccacacctattgctggactggacaacctaaacgtcttcctcaaggcctgc
gggaagcttggactaaaggaagcccagctctttcacccgggagatcttcaggacttatcc
acaagagtcactgtcaagcatcaagagaccaacaggaggctgaaaaatgtactgatcacc
atttactggctggggagaagagctcagtgtgaacgtttctatgatggaccttacctgaat
tttaaggcattcgagggcttattgggcacagcactatacaagactctgcaggaatcgtcc
agtcagaaaggcagcaacgtcagagacagtggttttggagatagctggtactcagagcga
gaggagctcttccaactgagaggagaagtaggaggaggcggaggcggacacaggagagac
gactccctagacagcttggactctttgggctcccaaccccagagcatctcatctgacacc
actcttaaaggcagcagtgagggttgttgcagtgacactgaggcagactctgtgttcagg
atggctgagaacaaagacagtcttagttaccgccggtcagtaaccattactcccaaggcc
agctcccagttcaaccagttcctgcccactaaaaacaaaccatcagcctacgtgcccgct
ccgttaaggaagaaacgggctgaacgcaatgaggacagccggcgcagctgggccaacccc
acgtacaccgaggatgaaggcagactcaccagacagtgccaaacgcaagagagtatcgac
gggagtaaatcaacaagcgatatccaggtcaaccccaccgtcgtccggcaggttctccac
gaagagctgcagaagcgtcgtgaggagataaaggacagtgatgataggtggcaggatgac
ttgagcaaatggaagaacaggcgcaggagtgtcaactctgatatagtaaagaaaaaagag
gaaagggagaagatagaggatatcacgatcagcagcaacagaaggtccaagaccttcaag
gagatgcaagaggagagagaaaataaaggaaaagacagcgtcggcagtcgtttcggatct
ctgtcttacctggacgacgacgaagtatttgatagacctgtcattaccccacgcatccga
aaccatcctaggagctacactattgacactccttactattcctctgaaacccctgaggct
tctctgaaagaggacgaaccccccgctgcctctccagctactggcagggccgcctcccct
cccacctcacggaaagttgacattttggacagtcctgcaggcagctacgccacaaccacc
atcactcccgccatcactcccgccatcactcccgccatcactcccaccagccgcaggttt
ttcaacagctcccagtcttcggcagctgcacctctacagaggggtcctgtctcagaccgc
acagtcaagacagaggagaccacaaccatcgtctcctcttctagctccgtacaaaaggtg
cccgagccaaggcgcccattgtcgagcacacagaccgagttgggggccccctcctctggt
gttctgtacaaacaacaaccacagccaagctcaatggaacccaagcctcccggggtgtct
cgggtttccgcctctcttcccaggagctaccagagatcggatagcgcacgtctaacctca
gttgtcaccgcgaggccctttgggacccagtcgtcccgcctcacctcacttccccgagcc
tttgcagcggacaacgctcagaagcgcgtcaacggcgacgcagatgttcctaagaaaccg
tcggtgccgagccgctatcatcagttcatgacttctgaggacgagaaccactctcagtcc
agctcggtccacagcagtgaagacgaggaggaggaagaaaacaagaccacggggaagagt
atcacctctactcagagtgtctcacctgtccctcctcacttcaagagtgaagtcagtcct
gctccagccaaagaaatcagcgaggagaagtactctgagatgcggatcagcctgaaccag
aagcccaacagcagcagagactttggcttccaggcggtctgggactcaacaggagctcgc
gtcacgaccattcagccaggcagcccggcagagatgtgccagcttcaggtcggagacgag
gtgttgacggtgaacgggcacaaggtggcagaaatgagctacacagactggaagtcgtgc
atggaggaggctattcaggagggcaatctggtcatggatatacgccattatggcaagaac
aactgggacagagatcaaccttccttgccatttaaaagccataagatcatcaatctgacc
agtatggatcatccgatacttctaggttcccctgacacaaacactgtcagctccagcctg
gatttcacttcacgctcttccgtggaaaagctgccatccaaagatgcccccgcccacccc
gtcgttgatgtggcttcaaacggagtcaatggaggtttccgtgagcagcaggtgacgatg
aggaacaaagagtcagaaaccatatctttgaaaaacttaaaacggaggtcagagtttttt
gaaaaaggaggatcagactctgcaatgccagatatacctgttccttcaatcactccttct
tccagccgctggtcttgggacccagaagaggagcgcaaaagacaagagaaatggcagaag
gagcaggagcgcctcctacaggagaaatataagcgagaccaggagaagttgcaggaggaa
tggctaaaggatcaagaagaggttgccaacagcgtagaccaacaagagccctggagcctg
gaagtgaacagacacagcatcagcccacactcaccacgctctcctgtcaacttgcacacc
tctcctacgtgggaagaggaagagagaaagaggaaggcggagcaggagctggagcgccaa
aagcaggtggaggagcaagagcgccaaaggcaggtggaggagcaagaccgccaaaggcag
gcggaggtgcaagagcgccaaaggcaggcggaggagaggaggaagagggaagaggaggag
cgggagttgcagcgactccaggaggagagaaagcggaaagaaaggcagatggaggaagag
agaaagaggagggaggaggaagagctgatgtggcagaggaggagggaggaggagagggag
gaggaggagaggaggcggcaggaagctgcagagcagcagcgcagagagcgggagagagcc
ttgcagcagcagcaacagtgggctggtgactcccatggcttttccaatatccagccatca
ctgtcctttacagacaggataagatctcaatcatctccccagcttgatgaagaggagaaa
cctaaaggtgtgcatgggcagccggggggcatggctcactggctgctggaagagcaggtg
aggagtgcgcgtgacaaacagactccgagtcagcgggctgcatcagagctggagatggag
aggagaaacatcctcaatgccatgagatacagagagccggagagagtgacgggcagtggt
gttggtgagatgaagggtaggacgtccgtgtcgcaagcagagcaggagcggcagcagatc
ctgaacgagatgaagaagaaaactccgatgctgagggacaaaagctggatccgccagggc
tcctccaccatcgccaccaacaaggagtccgacgtgccacccatgcgaagaggtgagtct
cttgacaacttggacgcctccaaaaactcctggcgctcatcatggactcccagaagcaat
tcttacatccaaaactacactggtcctcaatctgccctctctggcaacacttcctcttac
ggtggtggtttggggtccaagcggcccgtctcctccattctgccttcctcctactccatg
ggctccctccgaggcggggcaggaaccccctcgtccccttggtcccggcagtcgtcttcc
cccacaccctcctctccatcacccaccacttctccagagcccacgtcggaggcgggcgac
cctcagcagcggagcaggtcagtgagtggcaagaaaatctgtacgttctgtgacaccccg
ctgggaaagggagcagctatgatcatcgagtcccttgggctctgttatcatttgagctgt
tttaagtgtatcgactgtaagtctggtctcggcggatcggaagccggtgctgaagtcaga
atacgaaacaaacagctccactgtaactcctgctacatgcgattcaaagctggcctgcca
acctctatgtga
DBGET
integrated database retrieval system