KEGG   Cottoperca gobio: 115026115
Entry
115026115         CDS       T07513                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
cgob  Cottoperca gobio
Pathway
cgob04145  Phagosome
cgob04148  Efferocytosis
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04810  Regulation of actin cytoskeleton
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115026115 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115026115 (itgb5)
   04148 Efferocytosis
    115026115 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115026115 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115026115 (itgb5)
   04810 Regulation of actin cytoskeleton
    115026115 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgob04131]
    115026115 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cgob04515]
    115026115 (itgb5)
Membrane trafficking [BR:cgob04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115026115 (itgb5)
Cell adhesion molecules [BR:cgob04515]
 Integrins
  Integrin beta subunits
   115026115 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 Integrin_b_cyt EGF_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 115026115
NCBI-ProteinID: XP_029314612
Ensembl: ENSCGOG00000006969
UniProt: A0A6J2RYQ2
LinkDB
Position
21:1286779..1325135
AA seq 803 aa
MWSPGTLMWRAAVCCVLLETVLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQKEFGTG
RTLTSRCDFTPSLQKRGCDVQFIEYPTSSISVLHNMPLSSKGSGSTQYDVVQIMPQKISL
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQMNPCNGYKLFPNCVPTFGFRHIVSLTDKVDRFNKEVQK
QMVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGRCHLNDNNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNVIQLIIAAYNNIRSKVELSVWDHPEDISLSFTATCQDGMPLPGLQKCADL
KIGDTVSFNVSVEARSCPPRGTDRSFTIKPVGFKDRLEVSVDYQCDCGCSRTAQPNSSYC
SSIGTYNCGTCDCEPGYLGARCGCQEGEASSMYISACREADGKQICSGRGECSCNQCLCY
ESEFGKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETSSCIA
DDGQMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNE
TCQRLCKDEIITVETLKTEDPGAVLCLYKTDNDCVMKFTYSEHASGLSILTALKEPECGA
GPDALMVLLAVVGSILLVGVVLLAVWKLAITVHDRREFAHFQSARSRARYEMASNPLYMQ
PVSTHFVETDFNMYGKSYNGAVH
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtggagcccggggacgctgatgtggcgcgcggctgtgtgctgcgtgctgctggagacg
gttctgcacactgcgagaggtctcaacatgtgtatgagtggcagcgctacgtcctgtgaa
gagtgcctgctgattcaccccagttgcgcctggtgcgcacaaaaggagtttgggacgggg
cggactctgacgtcacggtgcgattttactccaagcctgcagaagaggggctgcgacgtg
cagttcatcgagtaccccaccagcagcatctctgtcctgcacaacatgcctctgagttct
aaagggtccgggtcgacccagtacgacgtggtgcagattatgcctcagaagatctctctc
agcctgcggccaggagaccagacgtggtttgggctgcaggtgcggcaggtggaggactac
ccagtggatctctactacctgatggacctctctctttccatgaaagacgatctggacacc
atccgtaacttgggcaccaagctggccctggagatgggcaagctcaccagcaacttccgg
ctgggctttggctcctttgtggataaaaacatgtcccccttctcctacacagcacccaag
tatcagatgaacccttgcaatggatacaaactgttccccaactgtgtccccaccttcggt
ttccgccacatcgtctccctgacggataaagtggaccgtttcaacaaggaggtgcagaag
cagatggtatctcgcaaccgggacgcaccagagggagggtttgacgccatcctgcaggct
gctgtttgtaaggaggagatcgggtggaggaaggaggcctaccacctgctggtgttcgcc
acagacgacgtgcctcacctggctctggacggccggctgggaggcctcgtccagccgcac
gacgggaggtgtcacctcaacgataacaacgagtacagcgcctccaccaagatggactat
ccctctctcgctcttctgggggagaaactggcagaaaataacatcttcctcatcttcgca
gtgacgaagcggctctacgttatttacaagaactttactgccctcatacctggaactaca
gtcgagatcctggaccaggactctaagaatgtgattcagctgatcatcgcggcttacaat
aacatccgctctaaggtggagctgtccgtgtgggatcacccagaggacatcagcctgtcc
ttcaccgctacctgccaggacggaatgccgctgccaggcctccagaagtgtgccgacttg
aagataggagacacggtatcgttcaacgtgagcgtggaggcgaggagctgcccaccccgc
ggcaccgaccggagcttcaccatcaagccggtggggttcaaagaccgcctggaggtgtct
gtggactatcagtgtgactgcggctgcagccgcacggcacagcccaacagcagctactgc
agctccataggtacttataactgtgggacttgtgactgtgagccgggctacctgggcgcc
cgctgcgggtgccaggagggcgaggccagcagcatgtacatcagcgcctgccgggaagcc
gacggcaagcagatctgcagcgggcgaggagagtgcagctgcaaccagtgtctctgctac
gagtcggagttcggcaagatttacggcagctactgcgagtgtgacgacttctcgtgcgcc
cgacacaaaggcatcctctgctcaggtcacggggaatgtcactgcggagagtgtaagtgc
cacgccggttacatcggcgacaactgtaactgctccacagagacgtcgtcctgcatcgca
gacgacgggcagatgtgcagcgggcgaggaaactgcgtgtgcggccgctgtcagtgcacc
gagccgggggccttcggggatacctgtgagaaatgccccacctgccccgacgcctgtggc
actaaacgggagtgtattgagtgtcggctcttcaactcaggacggcttgcagacaacgag
acctgccagcgcctgtgcaaggatgaaatcatcactgtggagaccctcaaaacggaggac
cccggcgccgtgctttgtctgtacaagacagacaacgactgtgtcatgaagttcacgtat
tctgagcacgccagcggactctccatcctcacagctctgaaagagccagagtgcggtgct
gggccggacgctctgatggtgctgctcgcggtggtcggcagcatcctgctggtgggcgtg
gtgctgctcgctgtctggaagttggcaatcaccgtccatgaccggagagagttcgcacac
ttccagagcgcacgctcacgagccagatacgagatggcctccaaccctctgtacatgcag
ccggtgtctactcacttcgtggaaacagatttcaacatgtatgggaagtcctacaacgga
gcggtccactga

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