Cottoperca gobio: 115026115
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Entry
115026115 CDS
T07513
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
cgob
Cottoperca gobio
Pathway
cgob04145
Phagosome
cgob04148
Efferocytosis
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04810
Regulation of actin cytoskeleton
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115026115 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115026115 (itgb5)
04148 Efferocytosis
115026115 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
115026115 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115026115 (itgb5)
04810 Regulation of actin cytoskeleton
115026115 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115026115 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115026115 (itgb5)
Membrane trafficking [BR:
cgob04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115026115 (itgb5)
Cell adhesion molecules [BR:
cgob04515
]
Integrins
Integrin beta subunits
115026115 (itgb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
Integrin_b_cyt
EGF_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
115026115
NCBI-ProteinID:
XP_029314612
Ensembl:
ENSCGOG00000006969
UniProt:
A0A6J2RYQ2
LinkDB
All DBs
Position
21:1286779..1325135
Genome browser
AA seq
803 aa
AA seq
DB search
MWSPGTLMWRAAVCCVLLETVLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQKEFGTG
RTLTSRCDFTPSLQKRGCDVQFIEYPTSSISVLHNMPLSSKGSGSTQYDVVQIMPQKISL
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQMNPCNGYKLFPNCVPTFGFRHIVSLTDKVDRFNKEVQK
QMVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGRCHLNDNNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNVIQLIIAAYNNIRSKVELSVWDHPEDISLSFTATCQDGMPLPGLQKCADL
KIGDTVSFNVSVEARSCPPRGTDRSFTIKPVGFKDRLEVSVDYQCDCGCSRTAQPNSSYC
SSIGTYNCGTCDCEPGYLGARCGCQEGEASSMYISACREADGKQICSGRGECSCNQCLCY
ESEFGKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETSSCIA
DDGQMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNE
TCQRLCKDEIITVETLKTEDPGAVLCLYKTDNDCVMKFTYSEHASGLSILTALKEPECGA
GPDALMVLLAVVGSILLVGVVLLAVWKLAITVHDRREFAHFQSARSRARYEMASNPLYMQ
PVSTHFVETDFNMYGKSYNGAVH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccggggacgctgatgtggcgcgcggctgtgtgctgcgtgctgctggagacg
gttctgcacactgcgagaggtctcaacatgtgtatgagtggcagcgctacgtcctgtgaa
gagtgcctgctgattcaccccagttgcgcctggtgcgcacaaaaggagtttgggacgggg
cggactctgacgtcacggtgcgattttactccaagcctgcagaagaggggctgcgacgtg
cagttcatcgagtaccccaccagcagcatctctgtcctgcacaacatgcctctgagttct
aaagggtccgggtcgacccagtacgacgtggtgcagattatgcctcagaagatctctctc
agcctgcggccaggagaccagacgtggtttgggctgcaggtgcggcaggtggaggactac
ccagtggatctctactacctgatggacctctctctttccatgaaagacgatctggacacc
atccgtaacttgggcaccaagctggccctggagatgggcaagctcaccagcaacttccgg
ctgggctttggctcctttgtggataaaaacatgtcccccttctcctacacagcacccaag
tatcagatgaacccttgcaatggatacaaactgttccccaactgtgtccccaccttcggt
ttccgccacatcgtctccctgacggataaagtggaccgtttcaacaaggaggtgcagaag
cagatggtatctcgcaaccgggacgcaccagagggagggtttgacgccatcctgcaggct
gctgtttgtaaggaggagatcgggtggaggaaggaggcctaccacctgctggtgttcgcc
acagacgacgtgcctcacctggctctggacggccggctgggaggcctcgtccagccgcac
gacgggaggtgtcacctcaacgataacaacgagtacagcgcctccaccaagatggactat
ccctctctcgctcttctgggggagaaactggcagaaaataacatcttcctcatcttcgca
gtgacgaagcggctctacgttatttacaagaactttactgccctcatacctggaactaca
gtcgagatcctggaccaggactctaagaatgtgattcagctgatcatcgcggcttacaat
aacatccgctctaaggtggagctgtccgtgtgggatcacccagaggacatcagcctgtcc
ttcaccgctacctgccaggacggaatgccgctgccaggcctccagaagtgtgccgacttg
aagataggagacacggtatcgttcaacgtgagcgtggaggcgaggagctgcccaccccgc
ggcaccgaccggagcttcaccatcaagccggtggggttcaaagaccgcctggaggtgtct
gtggactatcagtgtgactgcggctgcagccgcacggcacagcccaacagcagctactgc
agctccataggtacttataactgtgggacttgtgactgtgagccgggctacctgggcgcc
cgctgcgggtgccaggagggcgaggccagcagcatgtacatcagcgcctgccgggaagcc
gacggcaagcagatctgcagcgggcgaggagagtgcagctgcaaccagtgtctctgctac
gagtcggagttcggcaagatttacggcagctactgcgagtgtgacgacttctcgtgcgcc
cgacacaaaggcatcctctgctcaggtcacggggaatgtcactgcggagagtgtaagtgc
cacgccggttacatcggcgacaactgtaactgctccacagagacgtcgtcctgcatcgca
gacgacgggcagatgtgcagcgggcgaggaaactgcgtgtgcggccgctgtcagtgcacc
gagccgggggccttcggggatacctgtgagaaatgccccacctgccccgacgcctgtggc
actaaacgggagtgtattgagtgtcggctcttcaactcaggacggcttgcagacaacgag
acctgccagcgcctgtgcaaggatgaaatcatcactgtggagaccctcaaaacggaggac
cccggcgccgtgctttgtctgtacaagacagacaacgactgtgtcatgaagttcacgtat
tctgagcacgccagcggactctccatcctcacagctctgaaagagccagagtgcggtgct
gggccggacgctctgatggtgctgctcgcggtggtcggcagcatcctgctggtgggcgtg
gtgctgctcgctgtctggaagttggcaatcaccgtccatgaccggagagagttcgcacac
ttccagagcgcacgctcacgagccagatacgagatggcctccaaccctctgtacatgcag
ccggtgtctactcacttcgtggaaacagatttcaacatgtatgggaagtcctacaacgga
gcggtccactga
DBGET
integrated database retrieval system