Cottoperca gobio: 115026222
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Entry
115026222 CDS
T07513
Symbol
itga6
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-6
KO
K06485
integrin alpha 6
Organism
cgob
Cottoperca gobio
Pathway
cgob04382
Cornified envelope formation
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04514
Cell adhesion molecules
cgob04810
Regulation of actin cytoskeleton
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115026222 (itga6)
04514 Cell adhesion molecules
115026222 (itga6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115026222 (itga6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115026222 (itga6)
04810 Regulation of actin cytoskeleton
115026222 (itga6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115026222 (itga6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115026222 (itga6)
04515 Cell adhesion molecules [BR:
cgob04515
]
115026222 (itga6)
04090 CD molecules [BR:
cgob04090
]
115026222 (itga6)
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115026222 (itga6)
Exosomal proteins of breast milk
115026222 (itga6)
Cell adhesion molecules [BR:
cgob04515
]
Integrins
Integrin alpha subunits
115026222 (itga6)
CD molecules [BR:
cgob04090
]
Proteins
115026222 (itga6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115026222
NCBI-ProteinID:
XP_029314787
Ensembl:
ENSCGOG00000015454
UniProt:
A0A6J2RZ66
LinkDB
All DBs
Position
21:complement(17954845..17971461)
Genome browser
AA seq
1089 aa
AA seq
DB search
MLLQEGPSAVNVALLLLYSYFLEPTLVVAFNLDTSHVIRKNGEAGSLFGFSLAVHRQLNP
DKRMLLIGAPRARALGKQTANITGGLYKCEITQSNDCERIEFDSEEDVRVENKENQWMGV
TVQSQGPGGKIVTCAHRYQRRLFVNTPQESRDITGRCFVLSQDLTIDSSSDEDGGNWNFC
EGRARGHEMFGSCQQGLAVTFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEMGVYDDG
PYEVGDEHLLNPELVPVPANSYLGFSLDSGHSITRGRGLTVVAGAPRANHSGAVVLLKKE
SQTSGRLLVEHILHGPGLASSFGYDVAVVDLNGDGWQDVVVGAPQFYMKDRDVGGAVYVY
INQAGRWDRITPVRLNGTKDSMFGLAVENIGDINQDSYEDIAIGAPYDDGGAGKVYIYHG
SAQGIKTSPAQILSGKEHSMRLFGYSLAGNMDLDSNSYPDVAVGSLSDTALIYRARPVIS
IRRDVKISPQEIDLTIKTCGNSICFAVDACFTYKANLASLNPRLTIGYSVEADGDRRKHG
LPSRVMFLNKSQTETDYQFNGTLDLRGQNQKTCIKITARLKDNIKDKMRSVPIEVSADIV
GTKRQKSKNGLPQLMPILDSSQSSKDVIEVNFVKEGCGRDHICRSNLKMEYKLYYKQSNL
EEYSPLPIKNNVPVFHLNYERKDLALLVTVNNMNEDDAYEAKLVGTFPDTLPYSGVRSHQ
TTFDKPIICTANQNGSQAECELGNPFKRDSKVTFYIILSTVGMTLDTTEIDIDLQLQTTS
VQENIAPVKVKAKVIIEFPLSVSGEASPNQVSFGGVVKGESAMKKEEEIGSLITYTFRIN
NLWKSSVKASLHIQWPKWNKDGKWLLYLVKITATGPEDVLCSPESEINSLKHIQETSASR
TRREIGERKTVGKMSSLSDKKKVLTCDSEIKCVVLKCPLQGLDGTAVELRSRLWNSTFIE
DYASISNMHIVVKASLVLHTQAKNMILRTPHTDVTVAVSPEGAVAQLSGVPWWIILVAVL
AGILILALLVFLLWKCGFFKRSKQEDSVPRYHAVRIRKETPEYKDGKVKLNPFEKKQWLT
TWIDDESYS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgcaggaaggaccctctgctgttaatgttgcacttttgttattatattcttat
ttcctggagccaactttggtggtcgccttcaacctggacaccagccatgtcatcaggaaa
aacggagaggcggggagcctgttcgggttttctctcgccgtgcaccggcaactcaacccg
gataaaagaatgctgttgatcggagcccccagagccagagctttaggaaaacagacggcc
aacattacaggaggcctttataaatgtgaaatcacccagtccaatgattgtgagcgcatt
gaatttgatagtgaagaggacgtgcgtgttgagaacaaggagaatcagtggatgggggtg
acggttcagagccagggaccaggcgggaagattgtgacttgtgctcatcgctatcagagg
cgcttgtttgtgaacacccctcaggagtcccgggacatcaccgggcgctgttttgtcctg
agtcaggacctgaccatcgactcgtcctcagatgaggacggaggtaactggaacttctgc
gagggcagagccagaggacatgagatgtttggatcttgccagcagggtttagctgtcacc
ttcactaaggattaccattacgtggtgtttggagcaccaggagcttacaactggaaaggc
attgtacgagtggagcaaaaaaacaacactttgctggagatgggagtgtacgatgacggc
ccgtatgaagttggagatgagcatctcctaaaccccgagctcgtgcctgtacctgccaac
agctacctcggattctcccttgattcgggacacagcatcaccagggggcgtggcctgacg
gtggtggctggagcaccccgagccaatcatagtggagctgtggtcctgctgaagaaagag
agccaaacatcgggcagactcttggtagagcacattctgcacgggccaggactcgcatcc
tcctttggatacgacgtggctgtggttgacctgaacggtgacggatggcaggacgtagtt
gtaggagcccctcagttctacatgaaggacagagacgttggaggagccgtttacgtctac
atcaaccaggcaggaaggtgggacagaatcactcctgtccgtctaaacgggaccaaagac
tcgatgtttggactggcagtggagaacattggagacatcaatcaagactcatatgaagac
attgccatcggcgctccttatgatgacggcggtgcaggaaaagtctacatttaccatggc
tctgcacaaggaatcaaaaccagccctgcacagatcctttcaggaaaagagcacagcatg
cgactctttggatactctctggcagggaacatggacttggacagcaactcttatccagac
gtggctgtaggctctctgtcggacacagctctgatctacagggcacggccggtcattagc
atcaggagagatgtcaaaatttctccacaggaaattgaccttacaatcaaaacctgcggt
aacagcatttgcttcgctgtggacgcgtgcttcacctacaaagcaaaccttgcatctctc
aacccaagactaaccatcggctattctgtcgaggcggacggagatcgcaggaaacatggg
ctgccctccagagtgatgttcctcaacaaatcccagactgaaacagactaccagtttaac
ggcaccctggacctccgcggccaaaaccagaaaacctgcatcaagataacagccagacta
aaggacaacattaaggacaagatgcggagcgttcccattgaggtgtctgcagacattgtg
ggaactaaacgacagaagtcaaagaacggcctccctcaactcatgcccatattagactcc
tctcaatccagcaaagacgtgattgaggtcaactttgtgaaagagggatgtggcagagat
catatttgccggagtaacctgaagatggagtacaaattatactacaaacaaagcaaccta
gaagagtactctccattacccatcaagaacaacgtccctgtgtttcatctgaattacgag
aggaaggacctggctctgcttgtgacagtaaacaacatgaatgaagacgatgcttatgag
gcgaagctggtcgggactttccctgatacgctgccatattctggagtccgctcccatcaa
acaacgttcgataagccgatcatctgtacagccaatcagaacggctctcaagcagagtgc
gagctgggcaatccttttaagagagactcaaaggttacattttacatcatcctgagcact
gtgggtatgactctcgacaccacagagatcgacatcgacctgcagctccaaacgactagt
gtgcaagaaaatattgcccctgttaaagtaaaggcgaaagtaatcattgaatttccgttg
tcagtcagtggggaagccagccctaatcaggtttcctttggaggtgtcgtgaaaggtgaa
agtgccatgaagaaagaagaagagattggaagtttgataacttatacattcagaataaac
aacttgtggaagtcttctgtcaaagcctcacttcacattcagtggcccaaatggaacaaa
gacggtaaatggcttctgtacctggtgaagatcactgccacaggaccggaggacgtcctg
tgctctcccgagtctgaaatcaactctctcaaacacatccaggagacctctgcgtccagg
acaaggcgtgaaattggagaaagaaaaactgttggcaaaatgtcttcgctgtcagacaaa
aaaaaggttttgacgtgtgacagtgagatcaaatgtgtggtgctcaagtgccccctgcag
ggcctggacggtactgcggttgaactgaggtctcgtctctggaactcgacctttattgag
gattacgcctctatttcaaacatgcacatcgttgtgaaggcctcgctcgtccttcatact
caggctaaaaacatgatcctgagaactcctcacactgatgtgacagtggcagtgtctcct
gaaggagcagtcgcacagctcagtggagttccctggtggatcatactggtggctgttctg
gcaggcatcttgattttagctctgttggtgtttctgctctggaagtgtggattcttcaaa
cggtccaaacaggaggacagcgtccctcgttaccacgcagtgcgcataagaaaggagact
ccggagtataaagacggaaaagtcaagcttaatccttttgaaaagaagcagtggctgacg
acttggattgatgatgaaagttactcgtga
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integrated database retrieval system
