Cottoperca gobio: 115026235
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Entry
115026235 CDS
T07513
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04382
Cornified envelope formation
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04518
Integrin signaling
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115026235 (col4a2)
04518 Integrin signaling
115026235 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115026235 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115026235 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115026235 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115026235 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115026235 (col4a2)
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115026235 (col4a2)
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115026235 (col4a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115026235
NCBI-ProteinID:
XP_029314815
UniProt:
A0A6J2RWU9
LinkDB
All DBs
Position
21:complement(15242368..15313311)
Genome browser
AA seq
1676 aa
AA seq
DB search
MSGTMQGQHNRGLNNLRLLLLCLSISILASGVYAGGKKHSGPCGGRDCSGGCKCFPEKGG
RGNPGSLGPQGHQGPSGRPGDAGIQGPKGEKGDRGRGGFIGPKGNVGMTGIPGFSGNDGI
PGHPGQAGPRGRPGADGCNGTQGDSGLPGQPGYNGSPGFPGQPGWKGQKGDTLELSVYME
RFRGDPGTPGVNGICGLPGNQGWQGNRGFTGPKGPQGTPGPRGPKGTMTTVLKGHRGEPG
ESGQPGPQGNSTHQQVLPPYGPSGPRGPNGLKGTAGDPADNKGETGVMGFHGGRGAAGED
GRPGPRGDFGEQGPKGRGGSKGERGDPGQLISSGSSWPWSTAGGPPGPPGVQGPEGERGP
VGDQGIPGPPGRYASQTQQQVLDFIGPFGIKGESGDKGQSGDPGLPADRAGLPGTDGRPG
AKGLPGPKGTWAEFFKGAPGGRGRPGNAGFKGVKGNHGVCECIVVNSSPGLPGPAGDHGD
AGMTGEFGQRGDLGEPGPEGDSGFPGSRGLSGVPGLKGRKGEERVSSERGYPGDSGVSGR
DGESGVFGAPGRNGFPGIPGSRGLPGEGPKGELGDKGFPGSPGRPGATGLSGQDGTVLGG
HKGQQGLPGDDGLAGYNGVPGTPGSPGGCSPGDGGQVDVTGPCDTFPGPPGLPGPPGPSG
LTGFPGPLGQTGPQGPLGAHGVKGDTGDQGIGGRPGPSGFSGPRGDRGFPGGKGSDGVPG
VPGVSGRYGAQGEKGVHGEIFGASAGSPGDPGLPGLQGNKGQTGDSGEQGYSGMDGMPGM
IGFKGERGPLGLQGEEGRPGPAGKYGYPGDPGRAGTPGPQGVTGQPGFTGERGTEGEPGS
PGPVGLKGFPGQFGNDGAVGEYGPTGQPGETGADGRPGVLGMKGYKGSPGMPGFEGTRGN
LGGKGFSGFSGEPGVLGQGGPKGVTGQSGAKGDRGLRGPSGDKPQIPGQLVFDMKGTKGD
YGQYGNQGFTGQRGIKGLPGVPGYEGTHGLPGEPSNKKGYHGDPGAEGLLGIKGMPGPTG
NQGITGFEGMPGNKGIKGSPGAYGASGDKGKSGFKGEKGPRIDLPGTTGLRGEHGLPGEP
GQKGLFGPTGDRGIPGFGGIEGKKGEWGDPGILGYPGSDGQKGTPGNQGQKGFPGSPGKE
GYPGVRGFTGNKGFLGLKGLYGLHGLKGQKGIPGTPGLDTTGPAGEQGIKGEKGEGGYPN
SQPGLPGTVGLKGFQGPLGDRGQPGLPGFRGPVGPNGTAEKPGHSGDPGSGGPNGYQGFP
GPKGLPGADAFPGEKGVRGISGFPGVPGRKGFKGDQGSFGHRGPNGVSGKKAVKGDQGVM
GVPGTIGLKGEKGPTGPKGNTGLTGFQGYPGNQGPLPIPIRIPGERGPNGPQGIKGPQGI
SGEVGPQGPPGDTGFMGPIGQKGMPGIGGRSGTPGFRGELGQMGHPGLQGMEGHRGNPGS
PGLPGMPGRSVSVGYLLVKHSQSEQTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAG
SCLRRFNTMPFLYCNPGDICYYASRNDKTYWLSTSAPLPMMPVEEGEIKPYISRCSVCEA
PSVAIAIHSQDITIPQCPAGWRSMWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRATPF
FECNGAKGTCHYFANKYSFWLTSIDQSFHTEAASETLKAGQLLSRISRCQVCMKNL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaccatgcaaggacaacacaacagaggactgaataatctgaggcttttgctt
ctgtgcctctccatttccatcctcgcctcaggagtgtacgcgggtgggaagaagcacagt
ggcccatgtggaggaagagactgcagcggaggctgtaaatgtttcccagagaagggtggc
aggggtaaccctgggtctctaggtcctcagggtcaccaggggccttcagggagaccaggc
gatgcaggcatccaaggaccaaagggggagaaaggtgaccgcggccgtggtggattcata
ggtcctaaaggaaatgtgggaatgaccggcattcctgggttttctggaaacgatggcata
cctggccacccaggacaagctggaccccgtggaaggcccggtgcagacggctgtaacggg
acacagggagactcagggctaccaggacaacccggctataatggctcacctggttttcct
ggacaaccaggatggaaggggcagaagggggacactctggagctgagtgtgtacatggag
cgcttcaggggagatccaggcacaccaggggtcaacggaatatgtgggcttccaggaaac
caaggttggcagggtaacagaggctttacaggaccaaagggtccccaaggtactccaggt
ccccgtgggccaaagggcactatgaccacagtgcttaagggacacagaggagaaccaggg
gaaagcggacagccagggccgcaaggaaactctactcatcagcaagttctgcccccctat
ggaccctcgggacctcgtggaccgaatggtctgaaaggaacagcaggagatccagctgac
aacaaaggagaaactggtgtgatgggattccatgggggccggggtgcagctggtgaagat
gggcgccctggaccaaggggggatttcggcgaacaaggaccaaaaggccgaggtggttct
aagggagaaagaggtgatccaggacaactgatttcatcaggatcctcatggccctggtct
acggcaggtggtcctcccggtccccctggtgtgcagggcccagagggagagaggggaccg
gtaggagaccaaggcatccccggaccccctggacgctacgcctcgcaaacacagcaacaa
gttttggatttcatagggccatttggtataaagggggaatcaggagacaagggccaatca
ggtgatccaggactccctgctgacagggcaggactccctggcaccgacgggcgcccaggg
gccaaaggccttccaggacccaaaggaacatgggctgagttcttcaagggggctcctggt
gggagaggaaggccgggcaatgcaggctttaaaggagtgaaaggtaatcatggggtgtgt
gaatgcattgttgtaaactcttcaccggggctacctggacctgccggtgaccacggcgat
gctgggatgactggagagtttggtcagaggggtgatttaggagagccaggtcccgaagga
gactctggattccctggatctcgtgggctcagcggtgtgccgggccttaagggtcgaaaa
ggggaagagagagtgtcctcagagagaggatatcctggagactcaggggtttctgggcga
gatggtgagtcgggagtgtttggtgctccaggccgaaatggttttcctggtatccctggg
agccgaggtcttccgggagaaggtcctaaaggagaacttggagacaaaggttttccaggt
tcgcccggtcgacccggtgcaaccgggctaagtggacaagacggtacagtccttggaggg
cacaagggccaacagggtttacctggtgacgacggcctggcaggttataatggagttcca
ggaacacctggcagcccaggcggctgtagtccaggagatggaggacaggtggatgtaaca
ggtccttgtgatacttttcctggacctcctgggctgcctggacctccaggtcccagtgga
ttaacaggtttcccaggtcctctcggccaaacaggaccacagggtccacttggagcacat
ggagtgaaaggagacacaggagatcaaggcatagggggccgtcctggaccatcaggtttt
tcgggcccccgtggagaccgtgggtttcctggcggcaaaggttcagacggagtcccaggt
gtgcccggtgtgtccggtcgatacggtgcgcaaggtgagaagggtgttcacggagaaatc
ttcggagcatcggcaggatcccccggtgacccagggctgcctgggcttcaagggaataaa
ggccagaccggtgattcaggagagcaaggctattcaggaatggacggcatgcctggtatg
atcggcttcaagggtgagcggggccctttaggcctgcagggggaggaagggaggcctggg
ccagcgggaaagtacggctaccccggtgatcctgggcgagcgggtacacctgggccgcaa
ggtgttactggacagccaggtttcactggagagaggggaactgaaggagaaccaggctct
ccaggtccagttggattaaaaggcttcccagggcaatttggtaatgatggtgccgttgga
gagtatggcccaacaggtcaaccgggagagactggtgcagatggacggccaggagttcta
ggaatgaagggatacaaagggtctcctggcatgccaggctttgaggggaccaggggcaat
ctaggggggaagggcttcagtgggttcagtggggaacctggagtgctgggccaaggtggt
ccaaaaggagtgacgggtcaaagtggagcgaaaggcgatcggggtttgagagggccatcc
ggggacaagcctcaaatccccggccagttggtttttgacatgaagggaaccaagggagac
tatggacaatatggaaatcaaggtttcaccgggcagagaggtattaagggtttgcccggt
gtgccgggctacgagggaactcacggtcttcctggagagcccagcaataagaaaggttac
catggagatccgggtgcagagggactgctggggataaaaggaatgcccggcccaactgga
aatcaaggaattactggttttgagggaatgccaggcaacaagggaattaaaggaagtcct
ggtgcctacggtgcatcaggagacaaaggaaagagtggatttaaaggggagaaaggccca
cgcatagatcttccaggaaccaccggcttgagaggagagcatggtcttccaggagaacca
ggccagaaaggattatttggaccaacaggggacaggggcataccaggttttggtggaatt
gaaggaaaaaaaggagagtggggggatccaggaatattagggtacccaggctctgatggt
cagaagggaactcctggtaaccaaggtcaaaaaggctttcctggatctcctggaaaagaa
ggatatccgggtgttcgtggcttcacaggaaacaaaggtttccttggcctgaagggtctt
tatggattacatggactgaaaggacagaagggtatccccggcacaccaggcctggatacc
actggaccagctggagaacaaggaatcaaaggagagaagggagagggaggttaccccaac
agccagccaggtttacctggcacagtgggtttgaaaggtttccagggccctctaggtgac
cgtggtcaacctggactgccaggatttcgcggccccgtaggaccaaatgggaccgctgaa
aaaccaggacacagtggggaccctggctctggaggacctaatgggtaccaaggcttccct
ggacccaaagggcttcctggtgctgatgctttccctggagaaaagggtgtacgtggaata
agtgggtttcctggagtccctggtaggaaaggattcaaaggagatcaaggttcatttgga
cacagggggccaaatggtgtttctgggaagaaagctgtgaaaggagatcaaggagtgatg
ggtgttcctggtaccataggtttgaagggagaaaaagggccaactggtccaaaaggaaac
actggacttacaggttttcaggggtacccagggaaccagggtcctcttcccattcccatc
agaatcccaggagagagaggccctaacggaccgcagggtataaaaggaccacaggggatc
agcggggaagtagggccacagggcccccctggtgatacaggtttcatgggacccattggg
cagaagggcatgcctgggattggtggtagatcaggaacacctggattccgtggagagctt
ggacaaatgggccaccctggtctgcaaggcatggaaggtcaccgtggcaatcctggtagc
cctgggttacctggtatgccgggccgaagcgtcagtgtgggttacttgctggtgaaacac
agtcaatcagaacagacgcccatgtgtcctgttggcatgtcgaaactgtgggacggctac
agtctgctgtactttgagggccaggaaaaggcccacaaccaggatcttggtttggcaggc
tcctgcctccgacggttcaacaccatgcccttcctgtactgcaatcctggagacatctgt
tactatgccagcagaaatgataagacctactggctgtcgacgagtgctcctcttcccatg
atgcccgtagaggagggagagatcaaaccgtatatcagccgctgctcagtatgcgaagct
ccatcagttgccatcgcaatccacagccaggatatcaccatcccacagtgtcctgcaggc
tggcgcagcatgtggattggatactccttcctcatgcacacagcagcaggaaatgaaggt
ggaggtcagtcattgtcatcgcctggctcttgcctggaggacttccgcgcaacaccgttc
tttgagtgtaacggggccaaaggcacatgccactactttgctaacaagtacagcttctgg
ctaacctccatagatcagtcgttccacactgaggcggcatcagagacgctcaaagcaggc
cagctcctgtcacgcatcagccgctgccaggtctgcatgaagaacttgtga
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integrated database retrieval system
