KEGG   Cottoperca gobio: 115026237
Entry
115026237         CDS       T07513                                 
Name
(RefSeq) collagen alpha-2(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04518  Integrin signaling
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115026237
   04518 Integrin signaling
    115026237
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115026237
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115026237
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgob04147]
    115026237
   00536 Glycosaminoglycan binding proteins [BR:cgob00536]
    115026237
Exosome [BR:cgob04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115026237
Glycosaminoglycan binding proteins [BR:cgob00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   115026237
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   115026237
SSDB
Motif
Pfam: VWA Collagen VWA_2
Other DBs
NCBI-GeneID: 115026237
NCBI-ProteinID: XP_029314820
Ensembl: ENSCGOG00000024729
UniProt: A0A6J2RZA1
LinkDB
Position
21:14943087..14955527
AA seq 1038 aa
MAMISVFIFLCMLQVALPQGLTPRGPRPVSGRGDSPEPTPPPAPPRPQGCETGIIECPIK
LFFTIDTSESIALQESPPGSLVNKVIEFTKTFAQKLDDETYRGEIKISWSIGGLNFSEDN
FVFSQFTTKENFIRNLNGIIYQGKGTHTDCALREMAHHMTHHYSGTKAVLFSVVITDGHV
TAEKCGGIKMEAERARDKNIKIFSVAASRSVNELGLKEIAGSPSEVYRDDYIAVDIVGGK
PEIKTESINRIIKIMKHQAYLQCYEQKCYEAPGMPGPSGRGGPKGIKGDRGNTGTSGAKG
KQGDGGIEGPIGHPGPKGEIGFKGDTGEIGAIGSKGVAGLSGKNGVDGHKGKIGRIGAPG
CKGDPGDKGPDGYHGDVGDTGPTGINGEKGDLGTPGKSGPSGPEGDQGPKGEDGNSGNPG
PPGEKGPLGPSGSPGTSGEEGRRGDFGEKGGHGPDGLKGEKGERGAQGSRDQPGKEGLKG
AKGDQGLPGPRGHPGETGALGGNGTMGNPGDPGSRGDSGPHGPIGDNGRSGFSYPGSRGS
TGDRGDPGRIGPRGGRGDCGAKGQPGNNGPKGESGDPGQSGEPGARGSRGVPGSDGDQGS
VGDPGLNECDVMTYIRETCGCCDCEKYCGALDIVFVIDSSESVGLTNFTLEKNFVINTIN
RLGSMANDPASSTGTRVGVVQFSHNGTFEAIRLNDPNINSMSAFKTAVNKLQWIAGGTFT
PSALKFAYDNLIRDGKRAQAKVSVVVITDGRYDPRDNENLLQYLCNDDDVVVNAIGVGDM
FKKKQDDEILGSIACNKKERVTGMKRYVDLMADVFLQTMENVLCPNPVIVCPDLPCKSEP
DVAPCVLRPVDLVFLLDGSERLGMENFQRVREFVQKAADRLGLAMSKTDRMRARLALIEF
GKENENHVAFPLTHNPTVIGNGIANLPYLDSSSSVGPAILHTIDSILGKGTTRLTRRNAE
VSFVFITDGVTDSNNLDEAVSAMRAAQVVSTVVTTRSDVDQKVLMKLAMDDRDAIFKVKD
FSDMSRSSLFDRFIKWVC
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggcgatgatttctgtgttcatctttctgtgcatgctccaagttgctttacctcaaggt
ctgacgcctcgtggacctcgaccagtatctgggcgaggtgacagtccagaaccaactcca
cctcccgccccgcccagacctcaaggttgtgagactgggattattgaatgtcccatcaag
ctgtttttcaccatcgacacctcagagagcatcgccttacaggagtccccccctgggagc
ctggtgaataaagtcatagagttcaccaagacttttgcccaaaagctggatgacgagacg
tacaggggtgagatcaagatctcctggtccataggaggcctgaacttctctgaagacaat
tttgtcttcagtcagttcacgaccaaggagaacttcatcaggaacctcaatgggattata
taccagggcaaaggcacccacaccgactgcgccctgagagaaatggctcaccatatgacc
caccactactcagggacgaaggccgtcctcttctctgtggtcatcactgacgggcacgtg
acagcagagaaatgtggagggataaagatggaggcagagagggcccgggataaaaatatc
aaaattttctcagtggcagcgtccaggagcgtcaatgaactaggactgaaggagatagcc
ggctctccctctgaagtgtaccgagatgactacatagctgtggacatcgtcggtgggaaa
ccagaaataaagactgaatccatcaatcgtatcataaaaatcatgaaacatcaagcctac
ttacagtgttatgaacagaaatgctatgaggctcctgggatgcctggaccatcagggcgg
ggaggtccaaaaggtataaaaggagacagaggtaatactgggacaagcggtgcaaagggt
aaacagggtgatggtggcattgagggtccaatcggacatcccggtccaaagggagagatt
ggttttaagggtgacacgggtgaaatcggagcaattggatcaaagggtgtggcaggactt
tctggcaagaatggagtcgacggtcataagggtaaaattggccggattggagctcctggt
tgcaaaggtgatccaggtgacaagggaccagatggttaccatggagatgttggggacact
gggccaaccggtatcaacggagaaaagggtgacctaggcacccctggaaagtcgggtccc
tctgggcctgagggcgatcaaggaccaaagggtgaagacggaaattctggaaatccaggg
ccaccgggagaaaagggacctctggggccttctggctcgcctggaacaagcggcgaagag
ggaaggagaggagactttggagaaaagggaggacatggtcctgatgggctaaaaggagag
aagggagaacgtggggcacagggaagcagagaccagccaggaaaagaaggactcaagggc
gcaaagggagatcaaggactaccgggaccgaggggtcatccaggagaaacaggcgccctc
ggaggaaacggcaccatgggaaatcctggagatcctggatcaaggggagactctgggccc
catggaccaataggtgacaatggaagatcaggattcagctaccctggatcgagaggatcc
actggagacagaggcgatccaggtagaataggacccagggggggcagaggtgactgtggg
gccaaaggacaacctggaaacaatggaccaaaaggagagtctggggatccaggtcagtcg
ggggagccaggagcgagaggatccagaggagttcctggatctgatggcgaccaaggatca
gtgggcgatcctgggctcaatgaatgtgatgtcatgacttacatcagggagacgtgtggt
tgttgtgactgtgagaagtactgtggagctctggacattgtatttgtaatcgatagctca
gagagtgtcgggctgacaaacttcaccctggaaaagaactttgttatcaacaccatcaac
aggctgggatctatggcaaacgaccctgcgtcatcaaccggcacaagagtcggagttgta
caattcagtcacaacgggacctttgaagccattcgtctcaatgacccaaacatcaactcc
atgtctgcatttaaaacggcagtgaacaagctgcagtggattgccgggggcaccttcaca
ccctcagctctcaagttcgcctacgataacctcatcagggatggcaagagagcccaagcc
aaagtatctgtggtggtgatcacagatggccgctatgacccgcgcgacaatgagaatctg
ctccaatacctttgcaacgacgatgatgtggtggtgaatgccattggggttggtgatatg
tttaaaaagaaacaggatgatgagatcttggggtcgatcgcgtgtaacaagaaggaacgt
gtcactgggatgaagcgctatgttgacttgatggctgatgtcttcctacagacgatggag
aatgtgctttgtcctaatccggtgattgtgtgccctgatctcccctgtaaaagtgaaccg
gatgtagcgccgtgtgtccttcggccggtggatttggtgtttctactagatggctcagag
cgccttgggatggagaacttccagcgtgttcgtgaatttgtgcagaaggcggcagatcga
ctggggctggctatgagcaagactgaccgaatgcgagcccgcttggcattgatagagttc
ggcaaggagaacgagaaccacgtggcctttcctctcacacacaacccaactgtcatcggc
aatggcatagcaaacttaccatatttggattcttcttcgagcgtagggcctgccatcctc
cacaccatcgacagcatcttaggtaaaggaacaactcgactaacaagacgcaacgcagag
gtttcgtttgttttcatcacagacggagtcactgacagcaacaacctcgacgaagcagtt
agtgccatgcgcgcggcacaggtcgtctccacagtggtaaccacaagaagtgacgttgac
caaaaagttctaatgaagctggccatggacgaccgagacgccatctttaaagtaaaagac
ttctctgatatgtcccggtccagtttgtttgaccgtttcattaagtgggtgtgttaa

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