Cottoperca gobio: 115026237
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Entry
115026237 CDS
T07513
Name
(RefSeq) collagen alpha-2(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04518
Integrin signaling
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115026237
04518 Integrin signaling
115026237
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115026237
09142 Cell motility
04820 Cytoskeleton in muscle cells
115026237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115026237
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115026237
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115026237
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115026237
Hyaluronan
Extracellular matrix or blood plasma proteins
115026237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
115026237
NCBI-ProteinID:
XP_029314820
Ensembl:
ENSCGOG00000024729
UniProt:
A0A6J2RZA1
LinkDB
All DBs
Position
21:14943087..14955527
Genome browser
AA seq
1038 aa
AA seq
DB search
MAMISVFIFLCMLQVALPQGLTPRGPRPVSGRGDSPEPTPPPAPPRPQGCETGIIECPIK
LFFTIDTSESIALQESPPGSLVNKVIEFTKTFAQKLDDETYRGEIKISWSIGGLNFSEDN
FVFSQFTTKENFIRNLNGIIYQGKGTHTDCALREMAHHMTHHYSGTKAVLFSVVITDGHV
TAEKCGGIKMEAERARDKNIKIFSVAASRSVNELGLKEIAGSPSEVYRDDYIAVDIVGGK
PEIKTESINRIIKIMKHQAYLQCYEQKCYEAPGMPGPSGRGGPKGIKGDRGNTGTSGAKG
KQGDGGIEGPIGHPGPKGEIGFKGDTGEIGAIGSKGVAGLSGKNGVDGHKGKIGRIGAPG
CKGDPGDKGPDGYHGDVGDTGPTGINGEKGDLGTPGKSGPSGPEGDQGPKGEDGNSGNPG
PPGEKGPLGPSGSPGTSGEEGRRGDFGEKGGHGPDGLKGEKGERGAQGSRDQPGKEGLKG
AKGDQGLPGPRGHPGETGALGGNGTMGNPGDPGSRGDSGPHGPIGDNGRSGFSYPGSRGS
TGDRGDPGRIGPRGGRGDCGAKGQPGNNGPKGESGDPGQSGEPGARGSRGVPGSDGDQGS
VGDPGLNECDVMTYIRETCGCCDCEKYCGALDIVFVIDSSESVGLTNFTLEKNFVINTIN
RLGSMANDPASSTGTRVGVVQFSHNGTFEAIRLNDPNINSMSAFKTAVNKLQWIAGGTFT
PSALKFAYDNLIRDGKRAQAKVSVVVITDGRYDPRDNENLLQYLCNDDDVVVNAIGVGDM
FKKKQDDEILGSIACNKKERVTGMKRYVDLMADVFLQTMENVLCPNPVIVCPDLPCKSEP
DVAPCVLRPVDLVFLLDGSERLGMENFQRVREFVQKAADRLGLAMSKTDRMRARLALIEF
GKENENHVAFPLTHNPTVIGNGIANLPYLDSSSSVGPAILHTIDSILGKGTTRLTRRNAE
VSFVFITDGVTDSNNLDEAVSAMRAAQVVSTVVTTRSDVDQKVLMKLAMDDRDAIFKVKD
FSDMSRSSLFDRFIKWVC
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatttctgtgttcatctttctgtgcatgctccaagttgctttacctcaaggt
ctgacgcctcgtggacctcgaccagtatctgggcgaggtgacagtccagaaccaactcca
cctcccgccccgcccagacctcaaggttgtgagactgggattattgaatgtcccatcaag
ctgtttttcaccatcgacacctcagagagcatcgccttacaggagtccccccctgggagc
ctggtgaataaagtcatagagttcaccaagacttttgcccaaaagctggatgacgagacg
tacaggggtgagatcaagatctcctggtccataggaggcctgaacttctctgaagacaat
tttgtcttcagtcagttcacgaccaaggagaacttcatcaggaacctcaatgggattata
taccagggcaaaggcacccacaccgactgcgccctgagagaaatggctcaccatatgacc
caccactactcagggacgaaggccgtcctcttctctgtggtcatcactgacgggcacgtg
acagcagagaaatgtggagggataaagatggaggcagagagggcccgggataaaaatatc
aaaattttctcagtggcagcgtccaggagcgtcaatgaactaggactgaaggagatagcc
ggctctccctctgaagtgtaccgagatgactacatagctgtggacatcgtcggtgggaaa
ccagaaataaagactgaatccatcaatcgtatcataaaaatcatgaaacatcaagcctac
ttacagtgttatgaacagaaatgctatgaggctcctgggatgcctggaccatcagggcgg
ggaggtccaaaaggtataaaaggagacagaggtaatactgggacaagcggtgcaaagggt
aaacagggtgatggtggcattgagggtccaatcggacatcccggtccaaagggagagatt
ggttttaagggtgacacgggtgaaatcggagcaattggatcaaagggtgtggcaggactt
tctggcaagaatggagtcgacggtcataagggtaaaattggccggattggagctcctggt
tgcaaaggtgatccaggtgacaagggaccagatggttaccatggagatgttggggacact
gggccaaccggtatcaacggagaaaagggtgacctaggcacccctggaaagtcgggtccc
tctgggcctgagggcgatcaaggaccaaagggtgaagacggaaattctggaaatccaggg
ccaccgggagaaaagggacctctggggccttctggctcgcctggaacaagcggcgaagag
ggaaggagaggagactttggagaaaagggaggacatggtcctgatgggctaaaaggagag
aagggagaacgtggggcacagggaagcagagaccagccaggaaaagaaggactcaagggc
gcaaagggagatcaaggactaccgggaccgaggggtcatccaggagaaacaggcgccctc
ggaggaaacggcaccatgggaaatcctggagatcctggatcaaggggagactctgggccc
catggaccaataggtgacaatggaagatcaggattcagctaccctggatcgagaggatcc
actggagacagaggcgatccaggtagaataggacccagggggggcagaggtgactgtggg
gccaaaggacaacctggaaacaatggaccaaaaggagagtctggggatccaggtcagtcg
ggggagccaggagcgagaggatccagaggagttcctggatctgatggcgaccaaggatca
gtgggcgatcctgggctcaatgaatgtgatgtcatgacttacatcagggagacgtgtggt
tgttgtgactgtgagaagtactgtggagctctggacattgtatttgtaatcgatagctca
gagagtgtcgggctgacaaacttcaccctggaaaagaactttgttatcaacaccatcaac
aggctgggatctatggcaaacgaccctgcgtcatcaaccggcacaagagtcggagttgta
caattcagtcacaacgggacctttgaagccattcgtctcaatgacccaaacatcaactcc
atgtctgcatttaaaacggcagtgaacaagctgcagtggattgccgggggcaccttcaca
ccctcagctctcaagttcgcctacgataacctcatcagggatggcaagagagcccaagcc
aaagtatctgtggtggtgatcacagatggccgctatgacccgcgcgacaatgagaatctg
ctccaatacctttgcaacgacgatgatgtggtggtgaatgccattggggttggtgatatg
tttaaaaagaaacaggatgatgagatcttggggtcgatcgcgtgtaacaagaaggaacgt
gtcactgggatgaagcgctatgttgacttgatggctgatgtcttcctacagacgatggag
aatgtgctttgtcctaatccggtgattgtgtgccctgatctcccctgtaaaagtgaaccg
gatgtagcgccgtgtgtccttcggccggtggatttggtgtttctactagatggctcagag
cgccttgggatggagaacttccagcgtgttcgtgaatttgtgcagaaggcggcagatcga
ctggggctggctatgagcaagactgaccgaatgcgagcccgcttggcattgatagagttc
ggcaaggagaacgagaaccacgtggcctttcctctcacacacaacccaactgtcatcggc
aatggcatagcaaacttaccatatttggattcttcttcgagcgtagggcctgccatcctc
cacaccatcgacagcatcttaggtaaaggaacaactcgactaacaagacgcaacgcagag
gtttcgtttgttttcatcacagacggagtcactgacagcaacaacctcgacgaagcagtt
agtgccatgcgcgcggcacaggtcgtctccacagtggtaaccacaagaagtgacgttgac
caaaaagttctaatgaagctggccatggacgaccgagacgccatctttaaagtaaaagac
ttctctgatatgtcccggtccagtttgtttgaccgtttcattaagtgggtgtgttaa
DBGET
integrated database retrieval system