Cottoperca gobio: 115026421
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Entry
115026421 CDS
T07513
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04622
RIG-I-like receptor signaling pathway
cgob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115026421 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115026421 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgob04054
]
115026421 (ifih1)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115026421 (ifih1)
Pattern recognition receptors [BR:
cgob04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
115026421 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
DEAD
ResIII
Helicase_C
CARD
SWI2_SNF2
AAA_22
C1_4
DUF1912
Motif
Other DBs
NCBI-GeneID:
115026421
NCBI-ProteinID:
XP_029315120
Ensembl:
ENSCGOG00000021479
UniProt:
A0A6J2S0J6
LinkDB
All DBs
Position
21:13879489..13889810
Genome browser
AA seq
977 aa
AA seq
DB search
MASDNDEANERLIEGYRQRLRDRIVVDRVLDHLHLIKTDQKDQIRQKAKTDGNLAATDLL
ISAVLKKPHETGWFRAFVDALKNSDCGSAADYMQAETPIEPEAEASNDYCVKLIQLLSPS
LLDMKTDVVCLQCYSQTLISKDDAEIIKTVTENKGNRSGARELLRSIVRGRQGWFSTFLD
VLRETEHQHLLYELTGGPDQYDKKDSDVTMSSLKDEPTGSEAAAESPQFMVISTTDEPPE
EEDLYGAANPELGQLTKCSEPSQPDPGAAAGGPEKDDIVLRDYQMEVAIPALEGKNIIIC
MPTGSGKTRVAVYITKKHLDHRRAEGHSGKVVVLVNKVPLVEQHYSAEFLRFLKHTYKVA
RVSGDCQLKISFTEIVKENDVIICTAQILENYLQRANKGEDEGVNLSDLTLIVIDECHHT
QKGGVYNHIMMRCLKQKHKNLRLKKEQKELMPLPQILGLTASPGVGGATKMEKAEDHILR
ICANLDAYKIMTTDLGEYKREPRKSIKTVEDRKEDPFGDVIKNIMIAIHAHANLSPTSDL
GSQTYEQWVVQKERLAATEGNLKVRVCAEHLRQYSEGLNLSNTIRMRDSFSFLNKYHEEE
LKNKTTPDDEQKIKITDTERFLFNLFKENKEELKGLAEKPEYENDSLSKLRRNILHEFSS
RVEARGIIFTKTRRSAIALSQWIQENPKFSDVGVKASHVIGAGDQSVVKPMTSAEQRDVL
TKFRDGDVNLLIATTVAEEGLDIAACNFVIRYGLVTNEIAMIQARGRGRAEDSSYTLVDV
KNSGVAEKECVNEYRITMMDKAIIKIRALNQEVYDKRILEFQIQAIMEGKMRMTKKKQQD
MQSEKCEVLFSCRSCSKHACTGEDIQIIENMHRVNVSTEFSKLFIQRENTTLQERLLDYE
TNFFIACKDCGQRWGSMMLYRGIDCPCLHVKNFVVTFNGKKKNKCTKWTDLKIKFPAFNY
IEHASQVAEGLDDDDSD
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagataacgatgaagcaaatgagcgtctcattgaaggctacaggcagaggttg
cgggatcgcattgtggtggatcgggttctggatcatttacatttgatcaaaaccgaccaa
aaggaccagatcagacaaaaggccaagaccgatggtaatttagctgctacggatctcctt
atttctgcagtcctaaagaagcctcacgaaaccggctggttcagggcatttgttgacgcg
ttgaaaaattcagattgtggatctgcagcggactacatgcaggccgagacccctatcgaa
cctgaagcagaggcatccaatgattactgtgtcaagcttattcaactactctctcccagt
ctgctggacatgaagactgatgtcgtgtgcctccaatgttactctcaaactctaatctcc
aaagatgacgctgagattattaaaactgtgacagaaaacaaagggaaccggagtggagcc
cgtgaacttctgagaagtatcgtgagaggtcgacagggatggttttctacatttctcgat
gttctgcgtgaaactgaacaccaacacctcctgtacgagctgactggagggccagatcaa
tatgacaagaaagactcagatgtgaccatgtcttcactgaaagatgaacctacaggaagt
gaagcagcagctgaaagcccacagtttatggtcatcagcacaactgacgagcctccagag
gaagaagatctgtacggagcggcgaatcctgaattaggacaactgacaaagtgctcagag
ccttcacaaccagatccaggagcagcggccggaggcccagaaaaagatgatattgttctt
cgagattatcagatggaagtcgctatacctgccttggaggggaaaaacatcatcatatgc
atgccgacaggaagtggtaaaaccagagttgccgtttatattaccaaaaaacatctggac
cacaggagggcagaggggcattcagggaaagtggtcgtcctggtgaacaaggttcctctt
gttgagcagcattattccgcagagttcttgcggttcctgaagcacacgtataaagtggcg
agagtcagcggagactgccagctcaaaatctctttcacggagatcgtgaaggaaaatgac
gtcatcatttgcacagcccagatccttgagaattacttgcagagggctaacaaaggagag
gacgaaggggtgaacttgagcgatctgacactgattgtgatcgatgagtgtcaccacact
cagaaaggaggagtgtacaaccacataatgatgcgctgcctgaagcagaagcacaagaac
ttaaggctgaagaaggagcagaaggagctcatgcccctccctcagatcctgggactgact
gcctcgccgggggtcgggggggccacaaaaatggagaaagctgaggaccacattctccgc
atttgtgcaaacttggatgcttacaaaatcatgacaactgaccttggggaatacaaaagg
gaaccaaggaaaagcattaaaactgttgaagacagaaaggaggatccctttggtgatgta
atcaaaaacatcatgattgcgattcatgcccatgccaatctgagtcccacctctgacctt
ggctctcagacttatgaacagtgggttgttcaaaaagagcgattagctgcaacagaggga
aatctgaaagtgcgagtttgcgcagagcacctccgacagtacagcgagggcctgaatctc
agcaacaccatccgcatgcgtgattccttcagtttcctgaacaaataccacgaggaggag
ttaaagaacaaaacaacaccagacgacgagcagaaaataaaaatcacagatactgagaga
ttcctcttcaatttgtttaaagagaacaaggaagagctgaaggggcttgcagagaaacca
gagtatgaaaatgacagcctgtcgaaactaagacgtaatattctgcacgagttcagcagc
agagtggaggccagaggcatcattttcacaaaaacgcgtcgcagcgccatcgctctaagt
caatggattcaggagaaccccaagttttctgacgttggagtgaaagcctcacatgtgatc
ggagcaggagaccagagtgttgttaaaccaatgacctctgcagagcaaagggatgtgttg
accaaattccgtgatggtgatgtcaacttgctgattgccaccacagtggcagaggaaggt
ttggacatagcagcgtgcaattttgttatccgatacggccttgtgaccaatgagattgct
atgattcaggctcgaggcagaggaagagctgaggacagcagttacactctggtcgatgtg
aagaactctggggtggcagagaaggagtgtgtcaatgagtaccgcattaccatgatggac
aaagccattatcaaaatcagagccttaaatcaagaggtctatgacaaaaggatactagag
tttcagatacaggctataatggaggggaagatgagaatgacaaagaagaagcagcaagac
atgcagtctgagaagtgtgaggtgttgtttagctgccgaagctgcagcaaacacgcctgc
accggcgaggacatccagatcatcgaaaacatgcacagagtcaatgtctcaacagagttc
agtaaacttttcattcagagagaaaacactactcttcaagaacgacttctagattatgag
accaatttcttcatagcatgcaaagactgtggacagagatggggttccatgatgctctac
cgtggaatcgattgcccctgcctccacgtgaaaaactttgtggtgacgttcaacggcaag
aagaaaaacaaatgcaccaagtggactgacctcaaaatcaagtttcccgcctttaactac
attgaacatgcgagccaggtggcggagggcttagatgacgatgacagtgactga
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