Cottoperca gobio: 115027019
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Entry
115027019 CDS
T07513
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115027019
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115027019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_31
DUF494
HTH_26
CUT
HTH_24
HTH_37
Motif
Other DBs
NCBI-GeneID:
115027019
NCBI-ProteinID:
XP_029315858
Ensembl:
ENSCGOG00000001525
UniProt:
A0A6J2RY34
LinkDB
All DBs
Position
3:6651287..6671261
Genome browser
AA seq
512 aa
AA seq
DB search
MFQQCEEPRFTIEQIDLLQRLRRTGITQAEVLHALDTLDHLERQHGHKLTHKPPYMPPSS
SLSSSSAVVASSSMTSTATQTSFPNNRLSLSPGNNFDTTSPPLPIPVASPVTIAAVVQNG
LVTNGKLSPPRFPLGVVSGSVTAPGYGFETSEEDIDVDDKVEDLMRRDSAMIKEEIKSFL
ANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKSNPGATLAMRAA
PLAMEEVMDWQQAPPPFGSAPGGFRLRRGSRFTWRKECLAVMESYFLDNQYPDEAKREEI
ATACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSPGG
QSNSDEVDGNDFPDQGCEVSLFDKRASARQFGFSRADLSSPTQVPTLLPSWFSALGRGGL
SGQRGTSLIGRSLVSGAGSQTEGSRLTGVSWSPPSPSLQDEPTIHSALSEPQDPMGLEKV
AVNHSNQALANQVEGAACSIGNDIKTETLEDD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagtgtgaggagcctcgtttcaccatcgagcagattgatctcctccagagg
ctaaggaggacgggtatcacacaggcggaggtgcttcacgccctggacaccctggaccac
ctggagcggcaacatggacacaagttgacccacaaacctccctacatgcctccctcatct
tccttgtcttcttccagcgccgtcgtcgcctcttcctctatgacttccaccgccactcag
acaagtttccccaacaaccgactctcactgtcgcctggtaacaactttgacaccacctca
ccgcctctacccattccagtagcctcacctgtcaccatagcggcggtagtccagaacggc
ctagtcaccaatgggaagctgtcaccgcccaggtttcctctcggtgtcgtcagtggcagc
gtgacggcaccaggctacggttttgagaccagtgaagaggacatagatgttgatgacaag
gtggaggacttgatgaggagggatagtgctatgatcaaagaagagattaagtccttcctg
gcgaacaggcggatctcccaggctgtggtcgctcaggtaacggggatcagtcagagtcgc
atctcccactggctccttcagcaggggtcggacctcagcgagcaaaagaaacgagccttc
tttcgctggtaccagctggagaagagcaaccctggtgccactcttgccatgcgagccgcc
ccattggctatggaggaggtgatggactggcagcaagccccacccccatttggctcggcc
cctgggggcttccgtctgcggcgagggagcaggttcacctggaggaaggagtgtctagct
gttatggagagctacttccttgataaccagtaccctgatgaagcgaagagagaggagatt
gccaccgcctgcaatgctgtcattcagaaaccaggaaaaaagctgtctgatttggagagg
gtaacatctctgaaggtctacaactggtttgccaaccgacgcaaagacatcaagaggcgc
gctaacattgaagcagccatcttggagagccacggcatcgaggttcagagtccaggcggt
cagtccaacagcgacgaggtggacggcaacgacttccctgaccagggctgcgaggtgtcc
ttatttgacaagagagcttcagccaggcagtttggattcagtcgagctgacctgtcctct
ccaacccaggttcccacgctgctccccagctggttctccgccctgggcagaggaggcttg
tcgggccagaggggcacgtctctgattggccgctcccttgtgtcaggggcgggctctcag
acggaaggttccagattgacaggtgtgtcctggtctcccccctccccctccctgcaggac
gaacccaccattcacagcgcgctgtccgagccgcaggacccaatgggtttagaaaaggtg
gccgtcaatcacagcaaccaagccctggccaatcaggtggaaggggcggcgtgcagtatt
gggaacgacatcaagacggaaacgctggaggacgactga
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