Cottoperca gobio: 115027098
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Entry
115027098 CDS
T07513
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04137
Mitophagy - animal
cgob04140
Autophagy - animal
cgob04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115027098 (hif1a)
04137 Mitophagy - animal
115027098 (hif1a)
04148 Efferocytosis
115027098 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115027098 (hif1a)
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115027098 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
MsyB
PAS_2
Motif
Other DBs
NCBI-GeneID:
115027098
NCBI-ProteinID:
XP_029316003
Ensembl:
ENSCGOG00000005476
UniProt:
A0A6J2RYH5
LinkDB
All DBs
Position
22:complement(9950031..9966287)
Genome browser
AA seq
755 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARSRRGKESEVFYELAQELPLPHTVSSSLDKASIMR
LIISYLRMRKLLSTDEPMAEEETELDTQLNSSYLKALEGFLMVLSEDGDMIYLSENVNKC
LGLAQFDLTGHSVFDFIHPCDQEELREMLVHKTGSKKAKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDSNTEEPPNGHKEPPVPYLVLICDPIQHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHAMDSDHLTKTHHNLFAKGQV
STGQYRMLAKKGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQIEDV
KPVKEEQQEEAKAVVESSQLDMSPALSKDEEKVPELDVIKLFTQAVDDQPLASLYDQLKE
EPEALTLLAPAAGDSIISLDFSCPESEIQLQKEVPVYNDVMLPSTSDKLALPLSPLPPSE
PIHVTTTSSEAAKAESYARAPSTTSSSHSSSGADRPLDFCFPMDSEMKPDFKLDLVEKLF
AIDTDPKTPFTRQAMEDLDLEMLAPYIPMDDDFQLRSLSPEEPLSCVTVKSLESSLLHVT
QDINSYPRSPVSAPDSRTASPEPLNSPNPATIVAKRTPQLDKEVSLKILAAQNAQRKRKL
GDIKEILGQGTSPPEQVEQGKKLKASESGTTRTILLLPSDVASRLLGSTSEGTSSLFSLP
QLTRYDCEVNAPLQGRQYLLQGEELLRALDHVNLI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtaccagaaaagaaaagggtgagctcggagcggaggaaggagaag
tccagggatgcagcgcgtagccggcgtgggaaggagtcggaggtgttctacgagctggca
caggagctgcccctgccccacactgtcagctccagcctggacaaggcctctataatgagg
ctcatcatcagctacctgcgcatgagaaaacttctcagcactgatgagccaatggcagag
gaggaaaccgagcttgatacacagctaaacagctcctacctaaaggctttggagggcttt
ctcatggtgctgtctgaagatggagatatgatctatctctccgagaatgtcaacaagtgc
ctggggctggcacagtttgacctgactggacacagtgtgtttgacttcatacatccctgt
gaccaggaagagctgagggagatgctggtccacaaaacaggctctaaaaaggccaaggaa
ccaaacacagagcgcagcttcttcctccgaatgaaatgcaccctcacaagcaggggccgc
actgtcaatgtcaaatcggctacatggaaggtgctccactgctcaggtcatgtccgtgta
tatgacagcaacactgaggagcctcccaacgggcacaaggagccaccggtcccctacctg
gttttgatctgtgacccaatccaacacccctccaacattgaggtccctcttgacaccaag
acctttctgagccgccacacaatggacatgaagttcacatattgtgacgagaggatcact
gagctcatgggttatgacccagaagacctgttgaatcgatctgtatatgaatactatcat
gctatggactcagaccatcttaccaagactcaccacaacttgtttgcaaagggccaggtg
agcacaggccagtaccggatgttggccaagaaaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaacaacaagaactcccagccacagtgtgttgtctgtgtcaacttt
gtgctcagtggcatccaggaggagaagttgatcttgtctctggagcagatcgaggatgtg
aagccagtgaaggaggagcagcaggaggaagcaaaagctgtggtggagagcagccagctc
gacatgtctccagccctgtcgaaggacgaggagaaggtcccagagttggatgtgatcaaa
ctgttcactcaggcggtggacgaccagcctctggcgagcctgtatgaccagctgaaggaa
gagccagaggccctcaccctgctggccccagctgctggagactcaatcatctccctggac
ttcagttgccctgaatcagagatccagctccagaaggaagtccctgtctacaatgatgta
atgcttccctccaccagtgacaagctggctctgcctctttcccctctgccgcccagcgag
cctatccatgtcaccacaaccagctcagaggctgccaaagctgagagctatgctcgagcc
ccgtccaccacatcgagcagccacagctcctcaggggctgaccgtccactggacttttgt
ttccccatggactcggagatgaaaccagatttcaaactagacttggtggagaagctgttt
gccattgatacagatcccaagaccccgttcaccagacaggcaatggaagacttagatcta
gagatgctggctccctacatccctatggacgatgacttccagctgcgcagtctgtcccca
gaagagcctctgtcttgtgtgacagtcaaatcccttgagagttctctcctccacgtcaca
caggacatcaacagctatccccgctccccagtcagtgcaccagacagtcgaacagcttcc
ccagagccacttaactctcctaatcctgccaccattgttgctaagaggaccccacagctg
gacaaagaagtctcgctcaagatcctggcagctcagaacgcacagcgcaaaagaaaactg
ggtgacataaaagaaattcttggacagggaacttcgcccccagaacaagtggagcagggc
aaaaagctgaaggcctcagagtcgggaacaaccaggaccatacttctgctgccttcagat
gtggcgagtcgtctgctgggcagcacatcagagggcaccagttccctgttcagcctgccg
cagctcacccgctacgactgcgaggtcaacgcacccttgcagggtcgtcagtatctgctg
cagggagaggagctgcttcgcgctttggaccatgtcaatctaatctaa
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