Cottoperca gobio: 115027299
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Entry
115027299 CDS
T07513
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
cgob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115027299 (srrm1)
03015 mRNA surveillance pathway
115027299 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115027299 (srrm1)
03041 Spliceosome [BR:
cgob03041
]
115027299 (srrm1)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115027299 (srrm1)
Spliceosome [BR:
cgob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
115027299 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
115027299
NCBI-ProteinID:
XP_029316392
Ensembl:
ENSCGOG00000017889
UniProt:
A0A6J2S3T6
LinkDB
All DBs
Position
22:14410383..14420604
Genome browser
AA seq
859 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEDKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEDKKEKDNRERAQSKSPRRRKTRSPSPRRRSP
VKRERKRSASRSPRRKPSPVVSSSPPPPLMQLPTKPMEQLVEPNTLAGALPEPVIQETPS
TCDTVVDVVKPDPVTEVKEPSPEKPLKKEERPKSREREKDGRRERPHHRSRSHSRTRRRR
SRSRSYSPRRRPSPRRRMSPRRRSPPRRGPTSTRHRHRRSPVRRRRSRSASSSGSSSSNS
RSPKKAMKPISNTPPRKQLQHPDNAMSPAGKDRRSPSPRARRGRGSASPARSSGLKRKPG
GRSDSPSDNNKPRPSEGSESEEDKNDKGATADSVQQRRQYRRQNRQSSSDTGSSSSDEGT
KRPTAGPGAKNGEVRRRRSRTPSPRRRHRDGSPRKRRSPSPGRRRRTPSPPRRRRSPSPP
RRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPLQKRKMSSSPPKRSSPGAKRRPSRSPK
RRSSPPQRRRTPPSSSPPRHRRSPMLPSVRPSRDTRSPLAAASRLSPSPANRGRTVRGST
SPQGRFENSNTSPSNQRRQQSPSHSGKPIRRVSRTPEPRNNQRPSPSPQPMRRASSRSRS
VSPQPAAQKRPVPASASPSPSRSASGSPPPAKKASSGSGSQSPSKNSDVDGSGKKKKKKK
EKKHKKEKKHKKHKKHKKEKSGGAVTGEGPENHGVEEDGESRKESDSEVEDSLDDLEKHL
REKALRSMRKAQLSPSQMS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgttgaagcagctgaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattactcagcgagtgacagaaattctg
gggttcgaggatgatgtcgtcatagagttcatatttaaccagcttgaggataagcacccg
gatagcaagatgatgcagatcaacctgacgggcttcctgaatgggaagaatgcccgggag
ttcatgagggacctgtggcccctgctgctgagtgcccaggagaacattgctggcatcccc
tctgcttttctggaacagaagaaggaggaaataaaacagagacagattgaacaggagaag
ctagcttctctgaagaaggtcgacgaggataagaaggaaaaggacaacagagagagggct
cagtcaaaaagcccaaggaggcggaagacaaggtcaccatcaccacggcgaaggtcgcca
gtgaagcgggaaaggaaacgtagtgcctctcggtccccaaggcgcaaacccagtccagtt
gttagcagttcaccacctccacccctgatgcagctgcccacgaaacctatggagcagctt
gtggagccaaatacattagcaggagctcttccagaaccagtcatccaagaaactccttcc
acctgtgacacagtggtggatgtggtgaaaccagatccagtgactgaagtcaaagaacct
tcgccagagaagcctcttaagaaagaagaaaggcccaagtcccgggaaagggagaaggac
ggcaggagggagagacctcaccaccgctctcgttctcattcccgcactcgcaggcgacgc
tcccgttctagatcttactccccacgtagaagaccgagtccccggaggaggatgtctcct
cgtcgaaggagcccccccagacgtggccccaccagcaccagacacagacatagacgctcc
cctgtccgcaggaggcgctctcgctctgcttcttcctctggcagcagctcctccaactct
cgctcacctaaaaaagcaatgaaaccaatatctaacacgccacccagaaaacagctccag
catcctgacaacgccatgagccctgccgggaaggacagacgatcaccatctccacgggcc
agaaggggcagaggctctgcatcaccagccagatcatctggtttaaagcgtaaaccagga
ggaaggagtgattctccatctgataataataagcccagaccatctgaagggtctgagtca
gaggaggataaaaatgacaaaggggcaacagcagattccgtgcagcagcgacgtcagtat
cgcaggcagaatcgacagtcgtcttcagatacagggtcttcctcatctgacgaggggacc
aagaggccaacagcagggcccggggccaaaaatggggaagtcaggaggagacgcagccgt
acaccttcaccacggaggcgacacagagatggctctccaaggaaaagacgttctccatct
cctggacgcagacgtcgcaccccgtctcccccacggcgtcgcagatctccctctcctcct
agacgaaggtctccttccccacctccacgtcgtcgttctccatcccccagacgatattct
ccacctatccagcgtcgctacagcccctcacctttgcctctacagaagaggaagatgtcc
agctctcccccaaaacgctcttctccaggggccaagcgacgcccctccaggtcccccaag
cgcagaagttctcctcctcaaaggagacgcacgcctccatcctcatctccacccagacac
aggaggagccccatgttgccttctgtcagaccaagcagggatacacgatcccctctcgca
gcagccagccgcctttccccgtcccctgcaaaccgcggtcgcactgttaggggttccacc
agtcctcagggacgttttgaaaactccaatacatctccatctaaccagcggagacagcag
tctccttcacacagtggaaaacccatccgcagagtgtcccgcaccccagagccacgcaac
aaccagagaccttctccaagtccccaacctatgaggagagcatcctccagatccagatct
gtttcgcctcaaccagcagctcagaaacgtccagtccctgcatctgcctccccctcaccg
tctcgctcagccagtgggtctccaccaccagccaaaaaggccagcagtggttccggcagc
caatccccaagcaagaattccgatgttgacggcagtggaaagaagaagaaaaagaagaag
gaaaagaaacataagaaggagaagaagcacaagaagcacaagaagcataagaaggagaag
agtggtggcgctgtgactggagagggaccagaaaaccacggcgtagaggaggatggagag
tcaagaaaggaatcagatagtgaagtagaggacagcttggacgacctggagaagcaccta
agagagaaggccctccgatccatgaggaaggcccagctatctccatcccagatgtcctga
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