Cottoperca gobio: 115027316
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Entry
115027316 CDS
T07513
Symbol
rpap1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115027316 (rpap1)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115027316 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
115027316
NCBI-ProteinID:
XP_029316428
Ensembl:
ENSCGOG00000004493
UniProt:
A0A6J2RZN6
LinkDB
All DBs
Position
22:9606170..9623449
Genome browser
AA seq
1434 aa
AA seq
DB search
MLRRPKPTDSEADLLREQEKFLASRSQSTANVVRRPDKRRGEAGGEGEGEGGEHNEKSDE
GRQRDVVTIEDLPDQMPSLTPGPPKKSRFKASHVTFEAEDAGERLDQHDTHVSAVLSRIV
ERDTSSAPISLPALTGMAFPKVFHRSETSCEVPLSSAGGKKSIFARQIAAQRLKEGKTPL
HCAPEATRTPEHRQQNLLPETSMDTDQCAAADTALSGPSLLSGHGLEVRDSSGETMRIHS
ENQAKLQAMSRSEILQEQKRLLSQLDPTLVDFVRSRKAQSVPSSASAAKKQPRAKSSEDN
FSLENVSRESESSRVAALFQKPHEVEMEGEEPPAPPAMMVEDLLLKPQKEWVHMDKLEPE
KLEWMRDLPAPRRKGTKEAMQARFDFAGTLIPSTEDLPTHLGLHHHGEEPDRAGYSLQEL
FLLSRSQLIQQRCLALSTLANILSKARAGEYLSFLKGSVVSTLLDAGLLFLLRFALDDGV
EGVMSAAVHALKALLVCAEDEECLDCTFSWFRGLASFPLLPTAQEEEEEEDAGLPENMKF
TAKEKEERKSDHDVARQDVVKGLLKMKLLPRLRYILEVVRPSPPAVQNVLQILTRIARHS
SSSATQVLDCPRLMETVLSEFLPTSWTTPSSPLPHSVYGLPLASAMKLLRVLATSGRHAC
ARLLNYLGVRERLPCLLSAEPSELLLEPAAALRVTTEAFRLWAVAAGYGQACKLYIDLYP
GLAKALQSFHRDLAASDPLLPLQLQRVLALLSLLTQVTHTAGCHQELQAGMVSSQGEECP
PPPPVSWGHVTGLQPSLLGHLKGFVKSLDNPVQKECSLAVIPAYLTYLEAYYHQLSRQNC
FKPVETLLELERLTSEVLLPLLSHPAVQGLMKNLKSSSVVCNVQFSHLGQETTPSLPGLA
CPGWRNHPGLVVPTSPFSLLTGLGLLLETITGIHKGLSCKFAGLLLSEPVVGYLRSCSQA
TPTLSHTRAWLLRHEHHLLYLLLRLAHRLVPIEPEVAKHASLYHQVALVLLPWLLPGSEY
LGHELLSSIMFSKDFISEGHSGGPEAVELGELKLQEETQHSTSLQTVGALLREACVQLPS
IRGCYLTQLAHLESSVLTSRDALLGHNPWISSHLLPELTGPTMPSDWPFIPLVSLYERTG
VSGGGGLTVEELPQGALQVVTHCLQWLLLLEVWREEALKVILPVAKLARLSCVFLCSSDL
FLERPVQKLTWGLFRLLTRRSRLDSLDLNVPPPGLASFQDLYTALLTQYEAVSFGDRLFG
CWVLLPLQRRYSVTMRLAVFGEHVGMLRSLGVTLEQLSIPIERFTSPPEDSLPLLSLYFR
SLVTGTLKHRWCPVLYVVTLSHVNSFIFSQDAAAQKVEAARHSMLRKIYYLTDEVLRNHL
LLFRLPQQKSEFGFDMFEKLPPIRAKRLESILRLQDRSDDKGDGRRHGVEREEK
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcgtcccaagccaactgactctgaggcagacctcctcagagaacaggagaag
tttctggcctctcgctcccagtctactgccaatgtggtccgccgacctgacaagaggaga
ggtgaggctggaggagaaggagaaggagaaggaggagagcataacgagaagagtgatgaa
gggagacagagggatgttgtcaccatagaagatcttccagaccaaatgccttctctgacg
ccaggccctcctaagaagtctcgctttaaagccagtcatgtcactttcgaggctgaggat
gcgggggagaggttggaccaacatgacactcacgtcagtgctgttctctccaggatcgtt
gagagagataccagctcggctccaatatctctaccagcgctgacaggcatggctttcccc
aaagtatttcaccgctctgaaaccagctgtgaggtgccactgtcttcagctgggggaaag
aaaagtatctttgcacgtcagattgcagcgcagagacttaaggagggaaagacgccttta
cattgtgcacctgaagctactcggacacctgaacacagacagcagaacctgctgcctgag
accagcatggatacagatcagtgtgctgctgcagatactgcactctcaggtcccagcctg
ctctctggtcatgggctcgaggtccgggatagctcaggagagacgatgaggatccacagt
gagaaccaggcgaagctccaggccatgtctcggtctgagatcctgcaagagcagaagaga
cttttatctcagctcgatcctacactggtggactttgttagatctcgcaaagcccagagt
gtcccgtcctcggcttccgcagccaaaaaacaaccccgggccaaaagcagcgaggacaat
ttttctcttgaaaatgtgagcagagagtcagaatcctccagggtcgctgctctgtttcag
aaaccccatgaagtagaaatggaaggagaggaaccaccagcaccacctgctatgatggtg
gaagatctgctgctgaagcctcagaaggaatgggtccacatggataagctggagccagag
aagctggagtggatgagagacttgccagcacccagaaggaaaggaaccaaggaggccatg
caggctcgctttgactttgcggggactttgattccatccactgaggatttgccaactcat
ttaggcctgcaccaccacggagaggagcctgatcgggccggttactccctgcaggaactc
ttcctgctgtctcggagtcagctcatccagcagaggtgtctggccctcagcactctggcc
aacatcctttcaaaggcacgtgccggggagtacctgtcttttctgaaaggcagcgtggtg
tccactctgctcgacgccggcctgctcttcctgcttcgctttgcattggacgacggtgtg
gagggagtgatgtctgcagctgtgcatgcacttaaggcgctcctcgtgtgtgcagaggat
gaagagtgtttggactgcactttctcctggtttcgcggcctggcctcttttcctctgctg
cccactgctcaggaggaggaagaagaggaggatgcagggcttcccgaaaatatgaagttt
acggctaaagagaaggaagagaggaagagcgatcatgatgttgccaggcaggatgttgtc
aagggtctgctaaagatgaaactgctcccaaggctgcgttacatccttgaggtggtccga
ccttctcctccagcggtccagaacgtcctgcagatcctgactcgaatcgccaggcactcc
tcctcatctgccacccaggtgcttgactgtcctcgcttgatggagacggtgttgtcagag
ttccttcccacttcctggacaacgccatcttcgccccttcctcattctgtttacggactc
ccactggccagcgccatgaagctgttgagagtgttggctacctctggcagacatgcctgt
gccaggctgttaaactatcttggagtgagggagcgtctgccttgtctgctgagtgctgag
cccagtgagctgctgctggaaccggccgcggccctcagagtcaccactgaggccttcagg
ctgtgggctgttgcagccggctatggccaggcctgcaaattatacatagacctgtatcca
ggcttagcgaaggcgttgcagtcatttcacagagacctggctgcctccgatcctctgttg
cctcttcagctccagcgggtcctggctctgctttctctgctcacacaggtcacacacact
gccggctgccaccaagagctacaggctggcatggtcagctctcagggagaagagtgccct
cctccacctccagtgtcctggggtcatgtcacagggctgcagccatccttgttgggacat
ttgaagggttttgtgaagagccttgataacccagtgcagaaggagtgcagcctggctgtg
ataccagcttacctgacctacctagaagcttactaccatcagctctccagacagaactgt
ttcaagccagtagagacgcttctggaactggagcggctgacgtctgaggttctcctcccc
ctgctgtcccaccctgctgtccaaggcctgatgaagaacctaaagtcttcctcagtagtg
tgtaatgtccagttcagtcatctgggccaagagacgacgcccagcctccccggtttggcc
tgcccaggatggaggaaccacccggggctggttgttcccacctcccccttctctctgctc
acaggcctggggctcctcctggaaaccatcaccggcatccacaaaggcctcagctgcaag
tttgcgggtctcctcctgtcagaacctgtggttggttacctgcgaagttgcagtcaggct
acgccgaccctgtctcacaccagagcctggctcctccgtcatgagcaccacctcctctac
ctgctgctccggctggcacacagactggttcccattgagccagaagtagccaagcacgcc
tcactgtaccaccaggtggcgctggttctgctgccatggttgttaccaggcagtgaatat
ctgggacatgaactgctgtctagcatcatgttcagcaaggactttatatcggagggccac
agcggaggacctgaagctgtagagctgggagagctgaaactccaagaggaaactcaacac
agcacctctctgcagactgtcggagctctgctgagagaagcctgcgtccagctgccatcc
atacgaggctgctacctcactcaactggcccacctggagtcgtccgtgctgacgtcccga
gacgctctcctcggccacaacccctggatcagctcccatctcctcccagagctcactggt
cccaccatgccatccgattggcctttcatcccgctcgtcagcctgtatgagcggacaggg
gtgtcgggcggtggggggttaacagtggaagaactcccgcagggggctctgcaggtggtg
acacactgtctgcagtggctgctgctgctggaggtctggagggaggaagcactaaaggtg
atccttcctgtcgccaagctcgcccgcctgtcctgtgtgttcctgtgttccagtgacttg
ttcctggagagacctgtccagaaactgacctggggtctgttcagactgctgaccaggaga
tccaggctggactctttggacctgaacgtccctcctccgggtctagcctccttccaggac
ttgtacactgctcttctgacccagtatgaagctgtgtcctttggagaccggctctttggc
tgctgggtcctgttacccctgcagaggaggtacagcgtcaccatgaggctggctgtgttt
ggtgaacacgtgggaatgctgaggtcactgggagtcactctggaacagctctccatcccc
atcgagcggttcacttccccccccgaagactccctccctctcctcagtctctacttccgc
tctttggtcacggggaccctgaagcaccgctggtgtcccgtcttatacgtggttaccttg
tctcacgtcaactccttcatattctctcaggacgctgcagcacagaaggttgaagcggct
cgacacagcatgctgaggaaaatctactacctgactgatgaggtgttgaggaaccacttg
ctgctcttccgtctgccacaacagaagtcagagtttggcttcgatatgttcgagaagttg
cctcccattagggcgaaacgtttggagagcatcctgagactgcaggaccgcagcgatgac
aaaggagacggaaggcggcatggagtggagagagaagagaagtag
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integrated database retrieval system
