Cottoperca gobio: 115027724
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Entry
115027724 CDS
T07513
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115027724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115027724
03021 Transcription machinery [BR:
cgob03021
]
115027724
03036 Chromosome and associated proteins [BR:
cgob03036
]
115027724
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Helix-turn-helix
ARID
115027724
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115027724
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115027724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
115027724
NCBI-ProteinID:
XP_029317061
Ensembl:
ENSCGOG00000003449
UniProt:
A0A6J2S360
LinkDB
All DBs
Position
22:complement(13069410..13124695)
Genome browser
AA seq
1759 aa
AA seq
DB search
MVTPALMVTPLCQMACTWGQQDLSGSIDDLPTGTEAGLGSAVSVAGSSSSSSSSQGEQGG
ASNQGQSPFSPHASPHLASQRSGPSPSPVGSPAGSTQSQHSRSGSGPISPASGPSANTTA
PGSAMAPQSSGNGPEGARPPIPRSPMAQEKGFMSNMQRNQASSQFASPQSGPPMSPHPSP
GGPVYPGMGPYPQSGPSGSYGPQGSQYGHQGNYPRSSNYSGPASTGYNGPSPGMTNSLGM
NASSPMHGQGPGQPIPVGRSHGPGSQNRVYPPMAPSSPGMPQPAGPGMGPPSLGGSNRKA
QEAAAAAMPGSANSTNNRRPPYVRSPAQMQPPQPTSTHWPAPQYTSTRPPPSPPLRAHLP
PILPPSHSQHHRQGSYQGPGISQASTMATTSPYSQPTGNSSAAVGNAQGPAYNMPPSGAM
GMSGDGIMSPDGKPKTDVKDDSGPANEPHKPKLQDGYINNNSSSSSQQCVSQPATPGGAL
PVPSPLSPSPASLSSYHGDDSDSISSPPWPLKTPSSPKANPNSSSLTGERIARLFELGVE
PERRGWVERYLTFMEERGTPVAQLPAVGKKPLDLWKLYIAVREIGGLAMVNKNKKWRELS
TTLNVGTSSTSASSLKKQYIQYLFAYECKMERGEEPPADSSSMAGGDSRKQVKIQPPSPA
NSGGSLQGPQTPQSSGSSSTAEAAGDLKPPTPATTPLGQVTPLPTNRSSVSVQDPFSEVS
DPAFQKRVTSLPPSAPYQQGLSMPDMMMRMQYEAKDPFAGMRKMAGADPYIPAQMPSGGI
QDMYGRSPSALSMSQRSQYPYGPGYDRRPDHVMGMEGNMGPPGSQNNMGPSNSEGSMYSP
SRYPSQQRHDGYSQQYPSMPYGMHPSGMYPQQQGYKRPMDGMYGPPPKRHESDMYAMQYA
SQQPDMYNHYGGGYSGPEHRPLQGQFPYPYPRDRMAPSGQSQHSMMGGGPTPNPAADGPN
MWPSRTDLGYPYPNRQGPPSQMPPYGSIGRDDMDGRPGQEQWHRQSPYMSSSGGMVPLSS
RQPSSYSNSPSMANHLPRAPSPGAFQRSMDSRMSPGKVPFMSAMKMPKPGMTMMGSQGGG
PLGHYPPNLRRDLNYPPGSVEATMPILKPRRRLTSKDIGTPEAWRVMMSLKSGLLAESTW
ALDTINILLYDDSTVGSFNLSQLPGFLELIVEYFRRYLIEIFGILEEFEVGTVAPTSLLD
SAADQIEEAIPDHETDSTTQPEPESAPTAEGEPAAEEAPPVTEPEPAEVKGEKEECDVSI
KKEDKNEEDGEKEGKAKEEESEKGAESKKECADQPVQPKPKQASKYDKLPIKIVHKEDLI
EDMTKHLGYITEFTSGLLHWQAGGGDSTAHIQTHFEPRSEPPAKEDGKTRKEKKEEKMVE
DGKKHITATIDDVLCARVDALSYAHPARSLPSYPFRVHQDGEQDHITLLEDEPRCLDEAP
LSRSSAWQDSQAKRCLCVSNIVRSLSFIPGNDLDMSRHPALVLLLSRLLLLHHQHPERNR
SPPSYQRDEQKEQGLTSSKEEWWRECLGLLRENAMVTMANISGHLDLSTYPDTICLPILD
GLLHWMVCPSAEAQDPFPSVAPHSQLTPQRLVLECLCKLSIQAGNIDLLLATPPFSRQEK
IFTILVRYIGQRKAQVYREMAVAFLSHLAQGDPTAACAIAMQKGSVGNLVGFLEDGVSMA
QYQQNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMAKVAENKREFVLYESRLLDISISSV
LNAGVVAIICQVLFHLGKL
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggttacaccggcgctcatggtaaccccgctgtgtcaaatggcatgcacctgggggcag
caagatctgtccggctcgattgatgacctccccactgggacggaggccggtctgggctcc
gccgtcagcgtcgccggctcctccagcagcagcagcagtagccaaggggagcagggaggg
gccagcaaccagggacagtcccccttctcccctcacgcctccccccacctcgccagccag
agaagcgggccctctccgtcccctgtgggttcgcctgccggctccactcagtcccagcac
tcgcgatctggttccggacccatctctcctgccagcggaccctcagccaacaccaccgca
ccaggttctgcgatggccccacagagctctgggaatggacccgaaggagcccgcccgcct
atcccccgctcacctatggctcaagagaaagggttcatgtccaacatgcagaggaaccag
gcaagctctcagtttgcttctcctcagtccggacctcctatgtccccgcacccgtcccct
gggggcccagtgtatcctgggatgggtccctacccccagagcggcccttcaggctcttat
ggacctcaaggatcacagtatggacaccaaggtaactatcctcggtcctccaactatagt
gggcctgccagtaccggctacaatggccccagccccggcatgaccaacagtctgggaatg
aatgcaagcagccccatgcacggccaggggcccggccagcccatacctgtaggacgcagc
cacggccctggcagtcagaacagggtgtacccgcccatggctcccagctcccccggcatg
cctcagccagctgggcccgggatggggcctccttctttgggtggctctaaccgcaaggcc
caggaggcagcagcagctgccatgccaggatctgccaactccacaaacaacaggcgacct
ccatatgtgaggtccccagcccagatgcagccaccccaacccacctccacccactggcct
gcaccccaatacacctccacccgtcctccaccttcacctccactcagagctcatcttcca
cccatcctgccaccctcacattcacagcatcataggcagggcagctatcaaggccctggc
atcagccaggcgagcaccatggctaccactagcccctacagccagccaacgggaaacagc
agcgcagccgtgggcaacgcacaaggtccagcctacaatatgccaccatcaggagcaatg
ggaatgtcgggagacgggataatgagccctgatgggaaaccgaaaacagacgtaaaagat
gacagcggccccgccaacgagcctcacaaaccaaagctacaggacggctacatcaacaat
aacagcagcagcagctcccagcagtgtgtgtcgcagccagccacgccaggcggtgccctt
cccgtgccctcccccctctcacccagcccggccagcctgtcctcctaccacggagacgac
agcgacagcatcagcagccccccctggcccctcaagacaccctccagtcctaaagccaac
cctaactcctcctccctcactggggagcgaatcgcgcggctatttgagctgggtgtggag
ccagagaggcggggctgggtggagcgatacctgaccttcatggaggagagaggcacgcct
gttgcacagcttcccgctgtgggcaagaagccactggacctctggaagctctacatagct
gttcgggagatcggaggccttgccatggtaaacaagaacaagaagtggcgcgagctgtcc
acaacccttaacgtgggtacatccagcacctccgccagctcgctgaagaagcagtacatc
cagtatctgtttgcctacgagtgtaagatggagaggggagaggagccgccagcagacagc
agcagcatggctggaggggacagcaggaagcaggtcaagatccagccaccctcacctgcg
aattcaggcggctccctccaaggcccacagacgccccagtcctccggcagcagctctaca
gcggaggcagcaggggatctgaaaccccccacacctgccaccacccctctgggacaggtc
acaccactgcccactaacaggagcagtgtgagcgtacaggatcccttctcggaggtgagc
gacccggccttccagaagcgtgttacctcccttcccccctcagctccctaccagcagggc
ctcagcatgcctgacatgatgatgaggatgcagtacgaggccaaggaccccttcgccggg
atgaggaagatggcaggagctgatccctacataccagctcaaatgcccagtggaggcata
caggacatgtatggtcgatccccgtcagccttgagcatgagccaacgctcgcaatatcca
tacgggccaggctacgataggagaccggaccatgtcatggggatggaggggaacatgggt
ccccctggcagtcagaacaacatgggaccttctaacagtgagggcagcatgtactctccc
agtagatacccttcgcagcagagacacgatggctacagtcagcagtatcccagcatgcca
tacgggatgcatccatctgggatgtacccacagcaacagggctacaaacggcccatggac
ggcatgtacggccccccacccaagagacatgagagtgacatgtacgccatgcagtacgcc
agccagcagccggacatgtacaaccactacggtggtgggtactcaggccctgaacacaga
cccctccagggacagttcccctacccctacccccgcgaccgcatggccccctcaggtcag
agccagcacagcatgatgggtggggggcccactcctaaccctgccgccgatggccccaac
atgtggccttccaggacagacctcggctatccctaccccaacagacaggggcctccgtca
caaatgccaccttacggctcaatcggcagagatgacatggacgggcggccggggcaggag
cagtggcaccgtcagtctccctacatgtcatcatccggcggcatggttcccctctcctca
cgtcagccatcatcttattccaactctccatccatggccaaccacctacccagagcaccc
agcccgggggccttccagcgctccatggactccaggatgtcgcccggcaaagtcccgttc
atgtcagccatgaagatgcctaagcctgggatgaccatgatgggctcccagggaggcgga
ccccttggtcactatcctcccaacctgaggcgagacctcaactacccaccaggatccgtg
gaggccaccatgccgattctcaagcctcgacgcaggctcacctccaaggacattggaacg
cctgaggcctggcgcgtgatgatgtctctgaagtccggcctgctggcagagagcacatgg
gctctcgacacaatcaacatcctgctgtacgatgacagcactgtgggctcctttaacctc
tcccagttgcctggattcctcgaactgattgtggagtacttccgccgttacctgatcgag
atctttggcatcctggaggagtttgaggtggggaccgtggctccgacaagccttttggac
tctgctgctgaccagatagaagaagccatccctgaccatgaaacagactctactacccaa
cctgaacctgagtcagctccaacagcagagggggagccagcagcagaggaagctccacca
gtcacagagccagagccagctgaggtgaagggtgagaaggaggagtgtgatgtgagcatc
aagaaagaggacaagaatgaagaggatggagagaaagagggaaaagcaaaagaagaagag
agtgaaaaaggagcagagagtaaaaaggagtgtgccgaccagcctgtacaaccgaaacct
aaacaagccagtaaatacgataagctccccatcaagatcgtccacaaagaggacctgatt
gaagacatgacgaagcacttaggttacatcactgagttcaccagcgggctgctacactgg
caggctggtggaggtgattccacagcacacattcaaacacactttgaaccccggagtgaa
ccacctgccaaggaggacggaaagacaagaaaagaaaagaaagaggaaaaaatggtggag
gacgggaagaaacatatcactgctactatcgatgatgttctgtgcgctcgggtcgacgcc
ctttcttacgcccaccctgcacgctccttgccgtcctaccccttcagggtgcatcaggac
ggggagcaggaccacatcaccctgctggaggacgagcctcgctgcctggacgaggctccg
ctctccagatcctccgcctggcaggactcgcaggccaagcggtgcctctgcgtgtccaac
atcgtccggagcctgtccttcatccccgggaacgacttggatatgtcgcgccaccctgct
ctggttcttctcctgagcaggctgctcctgctgcaccaccagcacccggagaggaacagg
tcgcctcctagctaccagcgagacgagcagaaggagcaggggctgacgagtagcaaagag
gagtggtggagggagtgtctgggtctgctcagggagaacgccatggtcactatggccaac
atctcgggccacctggatctctccacctacccggacactatctgcctccccatcttggac
ggccttctccactggatggtgtgcccttcagctgaagcccaggatcccttcccatctgta
gcaccccactcccagctcaccccccagaggctggtgcttgagtgtctctgcaagctcagc
atccaggccggcaacatcgacctcctgctagctacgccgcctttcagccgccaggagaaa
atcttcactatcctggtgcgctacatcggtcagaggaaggcccaggtgtacagggagatg
gcggtggcttttctgtcccacctggcacagggagaccccacagcggcatgtgccatagcc
atgcagaagggcagcgtgggtaatttggtaggcttcttggaggatggtgtcagcatggcg
cagtaccagcagaaccctcacagcttgcttcacatggggcacccccctatggacccgccg
agcataaacatgatgtgcagagcagctaaaggcttgctggctatggccaaagtggcggag
aacaagagagagtttgtgctgtatgaaagcagattattagacatctccatttcctctgtg
ctcaacgcaggggtggtggctattatttgccaagttctctttcacttagggaaattatga
DBGET
integrated database retrieval system
